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The map label for this gene is ycbC [H]

Identifier: 167623456

GI number: 167623456

Start: 1841173

End: 1841934

Strand: Direct

Name: ycbC [H]

Synonym: Shal_1525

Alternate gene names: 167623456

Gene position: 1841173-1841934 (Clockwise)

Preceding gene: 167623455

Following gene: 167623457

Centisome position: 35.22

GC content: 46.98

Gene sequence:

>762_bases
ATGTTTTGGTTAAAAAAGATTATCTCTCAGCTCTTTATGCCTATTCCTATGGTGTTGTTACTTATCGCTCTTGCCTATTT
AGTGATGCGTAACCGTCGGTCTTCAAAAGCGCTATTAGTGATAGCGGCAGCGCTGCTGATCATCTTGAGTAGCAGCTGGG
GCAGTAATTGGCTACTGGCACCATTGGAAGACCAATATTCAGTTAACAATCAGCCGATGGGTAAAGGCTGTTTGGTGATG
GTGCTAGGCAGTGGTCATGATGAAAATGCCAATTTACCCGCCGTGCAGCAACTTTCCCATACCGCCTTGGCTCGATTAAC
GGAGGGGGTACGCCAACTGTCTCTAGGGAAAAGCTGTAAGTTGGTGGTTAGCGGCTGGAGCGGCGGGCTCTCGTCGCGCT
CTCATGCCGATATGATGTTTGACGCAGCCGTTGAGTTGGGGGTCTCTGCTCAGTCCATTATTAAATTCCCTTTGCCGAAG
GATACCATTGAAGAAGCACAATTTATGGAGTGGGAGGTGGCCGATGCGCCATTTCGTTTAGTGACTTCGGCGAGCCATAT
GCCTAGAGCGATGGCCATTTTTAGCAATGCAAAGCTAAATGCGATTGCCGCACCGACTGATTTTGCTCAAAGAGCTTCTT
ATTGGTGGCGTTTTGACGCACAGAGTCTATTAAATTCCCAGCGTGCTATTCATGAATATATGGGATTACTCTGGTTTAAG
TTGAAACATGAAAAAAACGAAAAAGAAGGTCCTAGGTCCTAG

Upstream 100 bases:

>100_bases
TGAGAGGCGCTTAAATTCGAATGGCCACTGAATAAAATTAATGAATAGAATAACATGCTACACTTCTTTGATATCACTTC
CTCTCTAGGCGATAGTTTCT

Downstream 100 bases:

>100_bases
GAAAAGCAGGTTCTAGGGACAAGCTGAGACGAAAAAAGATGGTTAAAGCTGGGACGGAAAAAATGGAGCAGCCTATGGCC
TTACGGTTTACGGAACGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MFWLKKIISQLFMPIPMVLLLIALAYLVMRNRRSSKALLVIAAALLIILSSSWGSNWLLAPLEDQYSVNNQPMGKGCLVM
VLGSGHDENANLPAVQQLSHTALARLTEGVRQLSLGKSCKLVVSGWSGGLSSRSHADMMFDAAVELGVSAQSIIKFPLPK
DTIEEAQFMEWEVADAPFRLVTSASHMPRAMAIFSNAKLNAIAAPTDFAQRASYWWRFDAQSLLNSQRAIHEYMGLLWFK
LKHEKNEKEGPRS

Sequences:

>Translated_253_residues
MFWLKKIISQLFMPIPMVLLLIALAYLVMRNRRSSKALLVIAAALLIILSSSWGSNWLLAPLEDQYSVNNQPMGKGCLVM
VLGSGHDENANLPAVQQLSHTALARLTEGVRQLSLGKSCKLVVSGWSGGLSSRSHADMMFDAAVELGVSAQSIIKFPLPK
DTIEEAQFMEWEVADAPFRLVTSASHMPRAMAIFSNAKLNAIAAPTDFAQRASYWWRFDAQSLLNSQRAIHEYMGLLWFK
LKHEKNEKEGPRS
>Mature_253_residues
MFWLKKIISQLFMPIPMVLLLIALAYLVMRNRRSSKALLVIAAALLIILSSSWGSNWLLAPLEDQYSVNNQPMGKGCLVM
VLGSGHDENANLPAVQQLSHTALARLTEGVRQLSLGKSCKLVVSGWSGGLSSRSHADMMFDAAVELGVSAQSIIKFPLPK
DTIEEAQFMEWEVADAPFRLVTSASHMPRAMAIFSNAKLNAIAAPTDFAQRASYWWRFDAQSLLNSQRAIHEYMGLLWFK
LKHEKNEKEGPRS

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=195, Percent_Identity=35.3846153846154, Blast_Score=100, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28144; Mature: 28144

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWLKKIISQLFMPIPMVLLLIALAYLVMRNRRSSKALLVIAAALLIILSSSWGSNWLLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
PLEDQYSVNNQPMGKGCLVMVLGSGHDENANLPAVQQLSHTALARLTEGVRQLSLGKSCK
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LVVSGWSGGLSSRSHADMMFDAAVELGVSAQSIIKFPLPKDTIEEAQFMEWEVADAPFRL
EEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHEEECCCCCHHH
VTSASHMPRAMAIFSNAKLNAIAAPTDFAQRASYWWRFDAQSLLNSQRAIHEYMGLLWFK
HHCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHH
LKHEKNEKEGPRS
HHHHCCCCCCCCC
>Mature Secondary Structure
MFWLKKIISQLFMPIPMVLLLIALAYLVMRNRRSSKALLVIAAALLIILSSSWGSNWLLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
PLEDQYSVNNQPMGKGCLVMVLGSGHDENANLPAVQQLSHTALARLTEGVRQLSLGKSCK
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LVVSGWSGGLSSRSHADMMFDAAVELGVSAQSIIKFPLPKDTIEEAQFMEWEVADAPFRL
EEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHEEECCCCCHHH
VTSASHMPRAMAIFSNAKLNAIAAPTDFAQRASYWWRFDAQSLLNSQRAIHEYMGLLWFK
HHCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHH
LKHEKNEKEGPRS
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]