Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622250

Identifier: 167622250

GI number: 167622250

Start: 367748

End: 369025

Strand: Direct

Name: 167622250

Synonym: Shal_0309

Alternate gene names: NA

Gene position: 367748-369025 (Clockwise)

Preceding gene: 167622249

Following gene: 167622253

Centisome position: 7.04

GC content: 44.68

Gene sequence:

>1278_bases
TTGCCACACTTTGATACTGAACAAGTCGAGCAAGGCTGTGCTAAATTTTTACCGTTTGAAGCACAACAGCAAGCCCTTAA
TCAGTTTGCAGAGCGCTACATTAAGCTCGTTTTAGCCGTTGGACAGCACGATTGCTACTATGTCGATGCTTACTATGGGC
CTGAAGAGTGGCAAAAAGAGACCTATTGGCAACCGCTCGCCGATCTTCAGAGTCAATATCTACAGGGGAGTGAGCTAATA
GAGGCTATGGCGGTACGGCTCAGCGAACCCGAGTTAGTCGAGCGTCATCAATTTCTTCAAACACAGTGGCTGTCGATTGG
TGCATATTTAGCTCTCCTGCAGGGTAAAGAGTACAGTTTCAATGAAGAGGCGGTGGCTTTATACGACTGCCATTTAACTC
CCTACTCATTACTAGAGCATCAACAAGTACTGGCTGATATCGAAGCGTTATTACCGGGAGAGGGCTCACTTACCAATCGT
TATAACCAATTTAAGTCTCAATTTATTGTCCCAAAAGACAAGGCGGCAGAGGTGTTTACTGCATCGGTTGATATCGCCAG
AAAACTCACCAGTATGCATATGCACTTGCCTGAAAACGAAAGTTTTGAAATTGAATATGTGAACGACAAAGTGTGGACGG
CATATAACTGGTATAAGGGTGACTCCCACAGCTTAATTCAGTTAAATCAAGACCAACCCTTAGGTATCGAGCGCTACTTA
GAGCTGGCGTCCCATGAAGGGTATCCGGGGCACCATGTATTTAATGTCTTACAAGAGCAGAAGTTGGTGAAGGCTAAGCA
ATGGCTAGAATATGCCATCTATCCGCTATATAGCCCGATCTCTTACCTTTCAGAGGGTAGCGCAAACTATGCCTTGAGTT
TGATTATGTCTGATGACGAGGTGGTGGATTTTGAGCGTGACGTATTAATGCCTCTTGCTGGACTGGAGGGTGATTTGGCT
TTGTTCCATCAGATATTAAAGCTGGTAAAGAAACTTGGCTACTATGAAAATTATGTTAGCCAGTGTTTAACTGACAAGCT
GGTTGATGCCGAAATGGCGCAAAAGATGTTAATTGATGGCGCTCTATATCCACAATCACGTGCTAAACAGCGAGTGCAGT
TTTTTGAACGTAATCGCTCATATGTGATTAACTATAGCGTAGGCGAAGATGCCGTTGCTGCTTGGGTGGAGGCTAAGGCT
GAGACGACAGTAGAGAAATGGACGCGTTTCGAGAGCATATTATCTAGGCCTCTAAACGCATCGGATATGCTTGTTTAA

Upstream 100 bases:

>100_bases
TAAGTTTGACTCGCTAACCAACTTTTCTCACCTGCCACACATTGTATAATGTATGCAAATGATGTAAGTTTGACTCTCAT
CTACCTGCTAGGAGTCTTTT

Downstream 100 bases:

>100_bases
CGACTAGCTTATTGGTCAGCTTAGTTAAACGGGCTCATTTGGGTTGTGTTCAAAAGTGCGGCCTTGGCGTGGTGCTGAGG
TCGGTACTTCTTTATAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MPHFDTEQVEQGCAKFLPFEAQQQALNQFAERYIKLVLAVGQHDCYYVDAYYGPEEWQKETYWQPLADLQSQYLQGSELI
EAMAVRLSEPELVERHQFLQTQWLSIGAYLALLQGKEYSFNEEAVALYDCHLTPYSLLEHQQVLADIEALLPGEGSLTNR
YNQFKSQFIVPKDKAAEVFTASVDIARKLTSMHMHLPENESFEIEYVNDKVWTAYNWYKGDSHSLIQLNQDQPLGIERYL
ELASHEGYPGHHVFNVLQEQKLVKAKQWLEYAIYPLYSPISYLSEGSANYALSLIMSDDEVVDFERDVLMPLAGLEGDLA
LFHQILKLVKKLGYYENYVSQCLTDKLVDAEMAQKMLIDGALYPQSRAKQRVQFFERNRSYVINYSVGEDAVAAWVEAKA
ETTVEKWTRFESILSRPLNASDMLV

Sequences:

>Translated_425_residues
MPHFDTEQVEQGCAKFLPFEAQQQALNQFAERYIKLVLAVGQHDCYYVDAYYGPEEWQKETYWQPLADLQSQYLQGSELI
EAMAVRLSEPELVERHQFLQTQWLSIGAYLALLQGKEYSFNEEAVALYDCHLTPYSLLEHQQVLADIEALLPGEGSLTNR
YNQFKSQFIVPKDKAAEVFTASVDIARKLTSMHMHLPENESFEIEYVNDKVWTAYNWYKGDSHSLIQLNQDQPLGIERYL
ELASHEGYPGHHVFNVLQEQKLVKAKQWLEYAIYPLYSPISYLSEGSANYALSLIMSDDEVVDFERDVLMPLAGLEGDLA
LFHQILKLVKKLGYYENYVSQCLTDKLVDAEMAQKMLIDGALYPQSRAKQRVQFFERNRSYVINYSVGEDAVAAWVEAKA
ETTVEKWTRFESILSRPLNASDMLV
>Mature_424_residues
PHFDTEQVEQGCAKFLPFEAQQQALNQFAERYIKLVLAVGQHDCYYVDAYYGPEEWQKETYWQPLADLQSQYLQGSELIE
AMAVRLSEPELVERHQFLQTQWLSIGAYLALLQGKEYSFNEEAVALYDCHLTPYSLLEHQQVLADIEALLPGEGSLTNRY
NQFKSQFIVPKDKAAEVFTASVDIARKLTSMHMHLPENESFEIEYVNDKVWTAYNWYKGDSHSLIQLNQDQPLGIERYLE
LASHEGYPGHHVFNVLQEQKLVKAKQWLEYAIYPLYSPISYLSEGSANYALSLIMSDDEVVDFERDVLMPLAGLEGDLAL
FHQILKLVKKLGYYENYVSQCLTDKLVDAEMAQKMLIDGALYPQSRAKQRVQFFERNRSYVINYSVGEDAVAAWVEAKAE
TTVEKWTRFESILSRPLNASDMLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49017; Mature: 48886

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHFDTEQVEQGCAKFLPFEAQQQALNQFAERYIKLVLAVGQHDCYYVDAYYGPEEWQKE
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHH
TYWQPLADLQSQYLQGSELIEAMAVRLSEPELVERHQFLQTQWLSIGAYLALLQGKEYSF
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NEEAVALYDCHLTPYSLLEHQQVLADIEALLPGEGSLTNRYNQFKSQFIVPKDKAAEVFT
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
ASVDIARKLTSMHMHLPENESFEIEYVNDKVWTAYNWYKGDSHSLIQLNQDQPLGIERYL
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCHHHHH
ELASHEGYPGHHVFNVLQEQKLVKAKQWLEYAIYPLYSPISYLSEGSANYALSLIMSDDE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
VVDFERDVLMPLAGLEGDLALFHQILKLVKKLGYYENYVSQCLTDKLVDAEMAQKMLIDG
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC
ALYPQSRAKQRVQFFERNRSYVINYSVGEDAVAAWVEAKAETTVEKWTRFESILSRPLNA
CCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SDMLV
CCCCC
>Mature Secondary Structure 
PHFDTEQVEQGCAKFLPFEAQQQALNQFAERYIKLVLAVGQHDCYYVDAYYGPEEWQKE
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHH
TYWQPLADLQSQYLQGSELIEAMAVRLSEPELVERHQFLQTQWLSIGAYLALLQGKEYSF
HHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NEEAVALYDCHLTPYSLLEHQQVLADIEALLPGEGSLTNRYNQFKSQFIVPKDKAAEVFT
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH
ASVDIARKLTSMHMHLPENESFEIEYVNDKVWTAYNWYKGDSHSLIQLNQDQPLGIERYL
HHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCHHHHH
ELASHEGYPGHHVFNVLQEQKLVKAKQWLEYAIYPLYSPISYLSEGSANYALSLIMSDDE
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
VVDFERDVLMPLAGLEGDLALFHQILKLVKKLGYYENYVSQCLTDKLVDAEMAQKMLIDG
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC
ALYPQSRAKQRVQFFERNRSYVINYSVGEDAVAAWVEAKAETTVEKWTRFESILSRPLNA
CCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SDMLV
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA