Click here to switch to the map view.

The map label for this gene is ybeT [C]

Identifier: 167622249

GI number: 167622249

Start: 366178

End: 367602

Strand: Direct

Name: ybeT [C]

Synonym: Shal_0308

Alternate gene names: 167622249

Gene position: 366178-367602 (Clockwise)

Preceding gene: 167622248

Following gene: 167622250

Centisome position: 7.01

GC content: 48.14

Gene sequence:

>1425_bases
TTGTTAAACGATATTGAATTCGTGAATCTGTTTTCAGCTGAGTTAGGCGCGGATTATCGCAAGGCTAAAAGCTATGTAAA
AGATGTTCCCACACAAGCTTTGCTGCATGTTCGTAGCTTCAGTCATAAGCTAACCAGTCTACTTGCTGAGCCGAAGAAGG
TACAGTTTGAAAGCCCCAATTTGTATGACCGTATCGAGCAGTTAAATCAACGTCGACTCATCGATGTTAAAACTACCCGT
GCACTGCATAAGCTTAGAGGCGATGGAAACCGTGGTGCCCATCCTGAAAAATATCACCTTACCCCAGAGCAGTTGCAACA
GTTAAGTGAGCGTTCGATCAAACACCTTTTGTCTTTGGTTGAATCGCTGTTTGTGACCGTGACCAAGCAAGACAAACCCG
ACTATTACTTCGAAGAGTTTGATTCGCTGGCGGGCCGAGATCTCTGCTATCGTGCGGTGATGGAGCGAGATCCTGAGTCT
CAGTATTTGGTTGGTATGTCTCTGAAAACACGAGCGCTGATGCAACGTGAGCAGGAGCTAGCATTACAAGATAGCGGTGA
TGATGCGGTTGAAGATCGCTCGACCGCTTCACTGAAACAAGCTAGCTACTGGTTCGAGCAAGCCTCAACGAAAAACTTAA
ACGCCTTGTATGAACATGGGGTGGCTTTGATCCACGGCTACAGTGGAGAGACTAATGTGATCGCCGGGGAGCTGGCGATT
GCCAAGGCTGCCGATGCTGGTATTGCAAATGCGATGGCGCTATTAGGCTATTTCTATTTGGTTGGCAGTGAACAATTTAG
TGTCGAGCTTAATCAGGCTGAAAAGTTTTTGAGTCAGGCCGCTAAGCTTGAGCAGTCAGAGGCTATGGCAAATCTTGGGG
TGCTTTATTATCAGCAAGATAACTTACCAGCGGCTTATAAGTATATTAATCGCGCCGCACAGGCTGGGTTCCCTCAGGCA
CAGTACCATTTAGCCTTGATGCTAGCTCGTGGTGAAGGCTGCAAACAGGACGCGATTAAGAGTGCCTATTGGATGGCCGA
GGCCGCCGAGCAGGGGCAGAACGATGCTATGTTGTCGTGCGCACAAACCATGTTGCATGATGATAATGCATTAGGACAAG
ATCTCTCCCAGGCAGAGTCTTACTTACGTGAAGTGATTAAGTACGGCCACAGTGTCCCGGCAATGATTGAGTTGAGTATC
GCCCTTGCCGATGGCATTTTGGGGCATATTGATGTGGTTTCTGCTGCCGCGCTGCTTAAAATGGCGCGAGAGAGGGCTAA
CCAAACTGAATTGGATGTTATTTTACCCCTTTGGGAGTCACTGGCTCTACAAGTCGATACTGTGCTGGAGATGACTGAAT
CGCCTCAAGAGCGGCTATCATTAAACAAGGCTGCTGAGCTGCTCAGTGAGCCGCAAATCTCATAA

Upstream 100 bases:

>100_bases
ATTTGCTTTGAGTAAAGTGCTGTAAGGCTAGCCTGTTAGTTTAAAATTGCGACTCGCTTAAATAGCGATACTTTTTAGGT
TGTGGTTAGGGGTAAACGTC

Downstream 100 bases:

>100_bases
TAACTATGTGGTTATGCTGATAAGTTAGTAAGTGGGTTAGGCAGTTAAGTTTGACTCGCTAACCAACTTTTCTCACCTGC
CACACATTGTATAATGTATG

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: SecC Motif-Containing Protein; Sel1-Like Repeat Protein; Sel1 Domain Protein Repeat-Containing Protein

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MLNDIEFVNLFSAELGADYRKAKSYVKDVPTQALLHVRSFSHKLTSLLAEPKKVQFESPNLYDRIEQLNQRRLIDVKTTR
ALHKLRGDGNRGAHPEKYHLTPEQLQQLSERSIKHLLSLVESLFVTVTKQDKPDYYFEEFDSLAGRDLCYRAVMERDPES
QYLVGMSLKTRALMQREQELALQDSGDDAVEDRSTASLKQASYWFEQASTKNLNALYEHGVALIHGYSGETNVIAGELAI
AKAADAGIANAMALLGYFYLVGSEQFSVELNQAEKFLSQAAKLEQSEAMANLGVLYYQQDNLPAAYKYINRAAQAGFPQA
QYHLALMLARGEGCKQDAIKSAYWMAEAAEQGQNDAMLSCAQTMLHDDNALGQDLSQAESYLREVIKYGHSVPAMIELSI
ALADGILGHIDVVSAAALLKMARERANQTELDVILPLWESLALQVDTVLEMTESPQERLSLNKAAELLSEPQIS

Sequences:

>Translated_474_residues
MLNDIEFVNLFSAELGADYRKAKSYVKDVPTQALLHVRSFSHKLTSLLAEPKKVQFESPNLYDRIEQLNQRRLIDVKTTR
ALHKLRGDGNRGAHPEKYHLTPEQLQQLSERSIKHLLSLVESLFVTVTKQDKPDYYFEEFDSLAGRDLCYRAVMERDPES
QYLVGMSLKTRALMQREQELALQDSGDDAVEDRSTASLKQASYWFEQASTKNLNALYEHGVALIHGYSGETNVIAGELAI
AKAADAGIANAMALLGYFYLVGSEQFSVELNQAEKFLSQAAKLEQSEAMANLGVLYYQQDNLPAAYKYINRAAQAGFPQA
QYHLALMLARGEGCKQDAIKSAYWMAEAAEQGQNDAMLSCAQTMLHDDNALGQDLSQAESYLREVIKYGHSVPAMIELSI
ALADGILGHIDVVSAAALLKMARERANQTELDVILPLWESLALQVDTVLEMTESPQERLSLNKAAELLSEPQIS
>Mature_474_residues
MLNDIEFVNLFSAELGADYRKAKSYVKDVPTQALLHVRSFSHKLTSLLAEPKKVQFESPNLYDRIEQLNQRRLIDVKTTR
ALHKLRGDGNRGAHPEKYHLTPEQLQQLSERSIKHLLSLVESLFVTVTKQDKPDYYFEEFDSLAGRDLCYRAVMERDPES
QYLVGMSLKTRALMQREQELALQDSGDDAVEDRSTASLKQASYWFEQASTKNLNALYEHGVALIHGYSGETNVIAGELAI
AKAADAGIANAMALLGYFYLVGSEQFSVELNQAEKFLSQAAKLEQSEAMANLGVLYYQQDNLPAAYKYINRAAQAGFPQA
QYHLALMLARGEGCKQDAIKSAYWMAEAAEQGQNDAMLSCAQTMLHDDNALGQDLSQAESYLREVIKYGHSVPAMIELSI
ALADGILGHIDVVSAAALLKMARERANQTELDVILPLWESLALQVDTVLEMTESPQERLSLNKAAELLSEPQIS

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI151301150, Length=226, Percent_Identity=29.2035398230088, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52860; Mature: 52860

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNDIEFVNLFSAELGADYRKAKSYVKDVPTQALLHVRSFSHKLTSLLAEPKKVQFESPN
CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LYDRIEQLNQRRLIDVKTTRALHKLRGDGNRGAHPEKYHLTPEQLQQLSERSIKHLLSLV
HHHHHHHHHHCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ESLFVTVTKQDKPDYYFEEFDSLAGRDLCYRAVMERDPESQYLVGMSLKTRALMQREQEL
HHHHEEHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHH
ALQDSGDDAVEDRSTASLKQASYWFEQASTKNLNALYEHGVALIHGYSGETNVIAGELAI
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCEEEHHHHH
AKAADAGIANAMALLGYFYLVGSEQFSVELNQAEKFLSQAAKLEQSEAMANLGVLYYQQD
HHHHCCHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
NLPAAYKYINRAAQAGFPQAQYHLALMLARGEGCKQDAIKSAYWMAEAAEQGQNDAMLSC
CCCHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
AQTMLHDDNALGQDLSQAESYLREVIKYGHSVPAMIELSIALADGILGHIDVVSAAALLK
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MARERANQTELDVILPLWESLALQVDTVLEMTESPQERLSLNKAAELLSEPQIS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLNDIEFVNLFSAELGADYRKAKSYVKDVPTQALLHVRSFSHKLTSLLAEPKKVQFESPN
CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LYDRIEQLNQRRLIDVKTTRALHKLRGDGNRGAHPEKYHLTPEQLQQLSERSIKHLLSLV
HHHHHHHHHHCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ESLFVTVTKQDKPDYYFEEFDSLAGRDLCYRAVMERDPESQYLVGMSLKTRALMQREQEL
HHHHEEHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHH
ALQDSGDDAVEDRSTASLKQASYWFEQASTKNLNALYEHGVALIHGYSGETNVIAGELAI
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEECCCCCCCEEEHHHHH
AKAADAGIANAMALLGYFYLVGSEQFSVELNQAEKFLSQAAKLEQSEAMANLGVLYYQQD
HHHHCCHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
NLPAAYKYINRAAQAGFPQAQYHLALMLARGEGCKQDAIKSAYWMAEAAEQGQNDAMLSC
CCCHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
AQTMLHDDNALGQDLSQAESYLREVIKYGHSVPAMIELSIALADGILGHIDVVSAAALLK
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MARERANQTELDVILPLWESLALQVDTVLEMTESPQERLSLNKAAELLSEPQIS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA