| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is aspA [H]
Identifier: 167622233
GI number: 167622233
Start: 349416
End: 351221
Strand: Direct
Name: aspA [H]
Synonym: Shal_0292
Alternate gene names: 167622233
Gene position: 349416-351221 (Clockwise)
Preceding gene: 167622231
Following gene: 167622234
Centisome position: 6.68
GC content: 44.57
Gene sequence:
>1806_bases ATGAAAGGAAACAATATGACGCTTAAATTATCTAAGTGTAGCTTGGCGCTTTTGCCGCTGATGCTATCTACAGTCAGTTA TGCAGGAGAATCCGACCCCCTGTATAAACACCAATGGCATTTGAAAAATACCGGCCAAGCCGCCTTCTCAGAAAATGGGG GCAAGGCTGGCAATGATTTAAAAACCAAACAAGCGCATAAAAAGGGGGCCCTTGGGCAGGGGGTTCAAATTTCTGTTGTA GACACGGGTCTGCAGATTGATCATATCGACTTGGCCGACAATGTTGTACCGGGCTCTATGGATTTGATCACAGGCAGTGA TTATCCAGAAGATACACACGGCCATGGTACTGCTGTCGGGGGGATTATTGCTGCGGTAGGGTTTAACGGGGAGGGCGTTA GAGGCATTGCTCCGAAAGCGGGTATTAATGGTTTCAATTTTCTTTTCGAACAGAGCATGAACTCTTGGTTGCTTTCTCAC GGGTATGGAGAGGGAACTGAAAATACCGAACTATTTAATCAAAGCTATGGTTCACAAGCGTTATTCATTCCTCAATTTGA TCTTGAAAACGATCCCCAACTGGCTATCGAAAATGCAGTGATGGAGGATGTCGCCAGTAATAGCAATAATGGTCGCGGCG CTGCATTTGTATCTTCTGCTGGTAACTCTTATAACTATTATGGGTACGCAGGATATTATTTTTTACCCGCCGATTACTTC GATGTTGAAGCGAGTAACCATGGTCTACCTATGCAAAATAGTAATATGACCAATAGTAAAGCGACTCACTGGAGCACAAC GGTGAGTGCCATTAACGCAAATGGTGAACGCTCTAGCTACTCGACTGTGGGTGCCAACGTATTTATGGCGGCTACAGGGG GAGAGTATGGTTCTGAGACGCCTGCTATGGTGACGACCGATCTGATGGGCTGTGATAGTGGTTTTAATGATAGCACTGGT TTAGGTAAAAACGGTCTTCATGGGGGGACTGCTGATGACCCTAATTGTAATTATACCAGTGTGATGAATGGTACATCATC TGCTGCACCGAGTATGGTGGGGGCGATCGCGGCTGTTATGTCAGCTAACCCTCAGTTAACGACTCGTGATGCAAAGCATG TATTAGCGCTAACGGCTAAAAAGACCGATCCTAACAATAAAGGGGTAACGTTAACCTTTACTGATATTAACGGAAATCTA GTTGAATACCCTGCAATTGATGGTTGGCAGAAAAATGATGCAGGTTTTGATTATCACCTGTTTTACGGTTTAGGCCGTCC TAATGTTAGCAAGGCGGTTCAGCTTGTAAGGCATGAGTCTGAAGACGATTTAGAAGATATCAAGCTACCGCCTCAGTTAG TGAGTCAATGGCATGCTAAAGCTGTCAATGTAGAAGTGCCAGACGTCGATCCAAACGGCGGAACAGCTTCTCTGGAAATT GATTTAGATGATTTTGTTATTGAGGGCGTTGAAGTCTTAGTGACCATAGATCATCCAAGAGTGACGGATTTAGCGATTGA ACTTATCTCTCCTGAAGGTACCCGTAGTGTGTTAATGACCCCAAGAAATGGTATGTACGGTCAAGCTTTTGGTGGTGATG CTTACGTGAATAAGCTGTTATCTTCAACGCATTTCTATGGTGAAGAGGCTGAAGGAGATTGGACCTTGAAAGTGGTTGAT ACCGGTGGTGAAGGTGATGGTGAGTTTATTTGGTATCCAGTAGAAAATGTCACTCAAGCTAACAATGTTAGCCCAGGTAT TATACAGAATTGGTCAGTACGCTTTATTGGTCACGAGGAGGACTAA
Upstream 100 bases:
>100_bases ATACAAATTGAAAAAAAATAAATTGTGTGTATTTTGTTAAATCCGCCCTTGATTTAACGTTTTATTAACGTTCGATGGTG GCTAGGGATAACTAATAAAA
Downstream 100 bases:
>100_bases ACAATGAAAAAAACAATAATGTTAATGGCAATCTTCGCCATCTCCAGTCAAGCCTTCGCGTCAGTGACGAAAGAGTTACC TATTGTGGTAACACAAGACT
Product: proprotein convertase P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MKGNNMTLKLSKCSLALLPLMLSTVSYAGESDPLYKHQWHLKNTGQAAFSENGGKAGNDLKTKQAHKKGALGQGVQISVV DTGLQIDHIDLADNVVPGSMDLITGSDYPEDTHGHGTAVGGIIAAVGFNGEGVRGIAPKAGINGFNFLFEQSMNSWLLSH GYGEGTENTELFNQSYGSQALFIPQFDLENDPQLAIENAVMEDVASNSNNGRGAAFVSSAGNSYNYYGYAGYYFLPADYF DVEASNHGLPMQNSNMTNSKATHWSTTVSAINANGERSSYSTVGANVFMAATGGEYGSETPAMVTTDLMGCDSGFNDSTG LGKNGLHGGTADDPNCNYTSVMNGTSSAAPSMVGAIAAVMSANPQLTTRDAKHVLALTAKKTDPNNKGVTLTFTDINGNL VEYPAIDGWQKNDAGFDYHLFYGLGRPNVSKAVQLVRHESEDDLEDIKLPPQLVSQWHAKAVNVEVPDVDPNGGTASLEI DLDDFVIEGVEVLVTIDHPRVTDLAIELISPEGTRSVLMTPRNGMYGQAFGGDAYVNKLLSSTHFYGEEAEGDWTLKVVD TGGEGDGEFIWYPVENVTQANNVSPGIIQNWSVRFIGHEED
Sequences:
>Translated_601_residues MKGNNMTLKLSKCSLALLPLMLSTVSYAGESDPLYKHQWHLKNTGQAAFSENGGKAGNDLKTKQAHKKGALGQGVQISVV DTGLQIDHIDLADNVVPGSMDLITGSDYPEDTHGHGTAVGGIIAAVGFNGEGVRGIAPKAGINGFNFLFEQSMNSWLLSH GYGEGTENTELFNQSYGSQALFIPQFDLENDPQLAIENAVMEDVASNSNNGRGAAFVSSAGNSYNYYGYAGYYFLPADYF DVEASNHGLPMQNSNMTNSKATHWSTTVSAINANGERSSYSTVGANVFMAATGGEYGSETPAMVTTDLMGCDSGFNDSTG LGKNGLHGGTADDPNCNYTSVMNGTSSAAPSMVGAIAAVMSANPQLTTRDAKHVLALTAKKTDPNNKGVTLTFTDINGNL VEYPAIDGWQKNDAGFDYHLFYGLGRPNVSKAVQLVRHESEDDLEDIKLPPQLVSQWHAKAVNVEVPDVDPNGGTASLEI DLDDFVIEGVEVLVTIDHPRVTDLAIELISPEGTRSVLMTPRNGMYGQAFGGDAYVNKLLSSTHFYGEEAEGDWTLKVVD TGGEGDGEFIWYPVENVTQANNVSPGIIQNWSVRFIGHEED >Mature_601_residues MKGNNMTLKLSKCSLALLPLMLSTVSYAGESDPLYKHQWHLKNTGQAAFSENGGKAGNDLKTKQAHKKGALGQGVQISVV DTGLQIDHIDLADNVVPGSMDLITGSDYPEDTHGHGTAVGGIIAAVGFNGEGVRGIAPKAGINGFNFLFEQSMNSWLLSH GYGEGTENTELFNQSYGSQALFIPQFDLENDPQLAIENAVMEDVASNSNNGRGAAFVSSAGNSYNYYGYAGYYFLPADYF DVEASNHGLPMQNSNMTNSKATHWSTTVSAINANGERSSYSTVGANVFMAATGGEYGSETPAMVTTDLMGCDSGFNDSTG LGKNGLHGGTADDPNCNYTSVMNGTSSAAPSMVGAIAAVMSANPQLTTRDAKHVLALTAKKTDPNNKGVTLTFTDINGNL VEYPAIDGWQKNDAGFDYHLFYGLGRPNVSKAVQLVRHESEDDLEDIKLPPQLVSQWHAKAVNVEVPDVDPNGGTASLEI DLDDFVIEGVEVLVTIDHPRVTDLAIELISPEGTRSVLMTPRNGMYGQAFGGDAYVNKLLSSTHFYGEEAEGDWTLKVVD TGGEGDGEFIWYPVENVTQANNVSPGIIQNWSVRFIGHEED
Specific function: Agent of furonculosis [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI20336244, Length=546, Percent_Identity=23.4432234432234, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI299523015, Length=586, Percent_Identity=23.7201365187713, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI20336246, Length=585, Percent_Identity=23.7606837606838, Blast_Score=112, Evalue=9e-25, Organism=Homo sapiens, GI20336190, Length=591, Percent_Identity=24.8730964467005, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI27894285, Length=590, Percent_Identity=25.5932203389831, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI4505577, Length=549, Percent_Identity=25.1366120218579, Blast_Score=105, Evalue=2e-22, Organism=Homo sapiens, GI20336188, Length=549, Percent_Identity=25.1366120218579, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI20336184, Length=549, Percent_Identity=25.1366120218579, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI20336180, Length=549, Percent_Identity=25.1366120218579, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI20336182, Length=549, Percent_Identity=25.1366120218579, Blast_Score=104, Evalue=3e-22, Organism=Homo sapiens, GI4505579, Length=549, Percent_Identity=23.8615664845173, Blast_Score=100, Evalue=8e-21, Organism=Homo sapiens, GI76443679, Length=550, Percent_Identity=23.8181818181818, Blast_Score=98, Evalue=3e-20, Organism=Homo sapiens, GI20336248, Length=555, Percent_Identity=23.963963963964, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI20336242, Length=266, Percent_Identity=27.0676691729323, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI295424143, Length=266, Percent_Identity=27.0676691729323, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI295424145, Length=247, Percent_Identity=27.5303643724696, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI20336186, Length=358, Percent_Identity=24.3016759776536, Blast_Score=67, Evalue=5e-11, Organism=Caenorhabditis elegans, GI71987206, Length=551, Percent_Identity=26.1343012704174, Blast_Score=143, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71988312, Length=590, Percent_Identity=25.0847457627119, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71988308, Length=590, Percent_Identity=25.0847457627119, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71988301, Length=564, Percent_Identity=25.886524822695, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71988315, Length=564, Percent_Identity=25.886524822695, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71988321, Length=564, Percent_Identity=25.886524822695, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71988297, Length=564, Percent_Identity=25.886524822695, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71987215, Length=471, Percent_Identity=24.6284501061571, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI25141268, Length=558, Percent_Identity=23.1182795698925, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI17136192, Length=545, Percent_Identity=24.0366972477064, Blast_Score=122, Evalue=9e-28, Organism=Drosophila melanogaster, GI24642488, Length=589, Percent_Identity=25.6366723259762, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24642484, Length=589, Percent_Identity=25.6366723259762, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24642486, Length=589, Percent_Identity=25.6366723259762, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI281360987, Length=588, Percent_Identity=25.1700680272109, Blast_Score=102, Evalue=7e-22, Organism=Drosophila melanogaster, GI24642494, Length=588, Percent_Identity=25.1700680272109, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI24642490, Length=588, Percent_Identity=25.1700680272109, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI45555723, Length=588, Percent_Identity=25.1700680272109, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI24642492, Length=588, Percent_Identity=25.1700680272109, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI45553515, Length=583, Percent_Identity=22.4699828473413, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24650058, Length=583, Percent_Identity=22.4699828473413, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI24650060, Length=583, Percent_Identity=22.4699828473413, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI45553513, Length=583, Percent_Identity=22.4699828473413, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI24650056, Length=579, Percent_Identity=23.1433506044905, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI17864552, Length=552, Percent_Identity=22.8260869565217, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI281360985, Length=202, Percent_Identity=31.1881188118812, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008979 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR002884 [H]
Pfam domain/function: PF01483 P_proprotein; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 64191; Mature: 64191
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGNNMTLKLSKCSLALLPLMLSTVSYAGESDPLYKHQWHLKNTGQAAFSENGGKAGNDL CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC KTKQAHKKGALGQGVQISVVDTGLQIDHIDLADNVVPGSMDLITGSDYPEDTHGHGTAVG HHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCC GIIAAVGFNGEGVRGIAPKAGINGFNFLFEQSMNSWLLSHGYGEGTENTELFNQSYGSQA CEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCE LFIPQFDLENDPQLAIENAVMEDVASNSNNGRGAAFVSSAGNSYNYYGYAGYYFLPADYF EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCEE DVEASNHGLPMQNSNMTNSKATHWSTTVSAINANGERSSYSTVGANVFMAATGGEYGSET EEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEECCCEEEEEECCCCCCCCC PAMVTTDLMGCDSGFNDSTGLGKNGLHGGTADDPNCNYTSVMNGTSSAAPSMVGAIAAVM CCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH SANPQLTTRDAKHVLALTAKKTDPNNKGVTLTFTDINGNLVEYPAIDGWQKNDAGFDYHL CCCCCEECCCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCCEEEE FYGLGRPNVSKAVQLVRHESEDDLEDIKLPPQLVSQWHAKAVNVEVPDVDPNGGTASLEI EEECCCCCHHHHHHHHHCCCCCCHHHCCCCHHHHHHHCCEEEEEECCCCCCCCCEEEEEE DLDDFVIEGVEVLVTIDHPRVTDLAIELISPEGTRSVLMTPRNGMYGQAFGGDAYVNKLL EHHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHH SSTHFYGEEAEGDWTLKVVDTGGEGDGEFIWYPVENVTQANNVSPGIIQNWSVRFIGHEE HHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCC D C >Mature Secondary Structure MKGNNMTLKLSKCSLALLPLMLSTVSYAGESDPLYKHQWHLKNTGQAAFSENGGKAGNDL CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC KTKQAHKKGALGQGVQISVVDTGLQIDHIDLADNVVPGSMDLITGSDYPEDTHGHGTAVG HHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCC GIIAAVGFNGEGVRGIAPKAGINGFNFLFEQSMNSWLLSHGYGEGTENTELFNQSYGSQA CEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCE LFIPQFDLENDPQLAIENAVMEDVASNSNNGRGAAFVSSAGNSYNYYGYAGYYFLPADYF EEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCEE DVEASNHGLPMQNSNMTNSKATHWSTTVSAINANGERSSYSTVGANVFMAATGGEYGSET EEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEECCCEEEEEECCCCCCCCC PAMVTTDLMGCDSGFNDSTGLGKNGLHGGTADDPNCNYTSVMNGTSSAAPSMVGAIAAVM CCEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHH SANPQLTTRDAKHVLALTAKKTDPNNKGVTLTFTDINGNLVEYPAIDGWQKNDAGFDYHL CCCCCEECCCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCCCEEEE FYGLGRPNVSKAVQLVRHESEDDLEDIKLPPQLVSQWHAKAVNVEVPDVDPNGGTASLEI EEECCCCCHHHHHHHHHCCCCCCHHHCCCCHHHHHHHCCEEEEEECCCCCCCCCEEEEEE DLDDFVIEGVEVLVTIDHPRVTDLAIELISPEGTRSVLMTPRNGMYGQAFGGDAYVNKLL EHHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCHHHHHHHH SSTHFYGEEAEGDWTLKVVDTGGEGDGEFIWYPVENVTQANNVSPGIIQNWSVRFIGHEE HHHCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1468618 [H]