| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is ftsX [H]
Identifier: 167622230
GI number: 167622230
Start: 345706
End: 346671
Strand: Direct
Name: ftsX [H]
Synonym: Shal_0289
Alternate gene names: 167622230
Gene position: 345706-346671 (Clockwise)
Preceding gene: 167622229
Following gene: 167622231
Centisome position: 6.61
GC content: 46.48
Gene sequence:
>966_bases ATGAGTCAGCAACCTCAGCTTAATCGAAGCAAACTGCCATTTTCTGGCAGAATTGTGATGTTCTTTATCCGCCATATTCA ACATGCTATGGCTAGCCTTGGTGAGTTATGGCGTAACCCCATTTCATCCATTATGACGATGGCAGTACTTGGTGTTAGCT TAAGTTTACCCGCCGCTTTGCAGGTATTAGTTAAAAACGCAGAGACCATTACCGAATCTTGGAATAGCGCTGCGGAGATA TCGCTGTTTATCGATGAAGGCCGCAGCGAGACGGTGATCCAAAGCTTGATCACCCGCCTTAAGGTCTACCCAGAAGTCAG TGACGTGAACTATATCGATCGTGATCAGGCACTAGAAGAGTTTCAGCGGTTATCGGGTTTTGGTGAGGCACTCTCCTATC TGGACTCTAATCCTCTACCTGCGGTAGTTATGGTGACGCCAAGCCTTAAATATTCAAGCCCAGCAGGAGCGAGAGAGTTA CTGCGTAAGCTTGAGCAAGAGCCTGAGGTGAGTTTTGGTCGATTAGATATTGAGTGGCTAGAGCGTCTGCAGGCGGTGGT TAAGTTATTGGAGCGAACAGTGCTCGCAATTGCAGCGTTACTCGTATTAGCAGTGGTACTGGTGATAGGCAATACCATAC GTTTAGCGATAATGAACCGTCGCAGCGAAATTGAAGTCATGAAACTGGTTGGTGCCACAGAAGCCTTTATTCAGCGCCCT TTTCTTTATACCGGGATCTGGTATGGGGTTATTGGGGGGATCTTAGCCTGGGTGATCATTAACTTATTAGTTTGGTATTT GGACTCTGCACTAGTGGAATTATTAGGCTTATATGGTAGTACACTGCATCTGGAGTCTCTTACCTTTGGAGAGTTAGGGC AGTTAGTCCTGCTAGCTTCGTTTTTAGGCTGGTTAGGCTCCTATCTTTCTGTACGTCAGCATTTGAGAGCGATAGAGCCG TCTTAA
Upstream 100 bases:
>100_bases CACGGATGAAATACCGTACGCTCACGCTCAAGCAAGGGCGGGTGTTAGGTGCAGAAGAGCTAAATGCTCACGATCACTTT GGCAGAGCTGAGGATAAATA
Downstream 100 bases:
>100_bases GTATTAGTGAACAACGCTTAAAAGATGAACTTTTTTTCATTTGCGTTGCTAATGACTCGGTGTAAGATTCTATCCGGCTA TAATGAGTATTGACTCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSQQPQLNRSKLPFSGRIVMFFIRHIQHAMASLGELWRNPISSIMTMAVLGVSLSLPAALQVLVKNAETITESWNSAAEI SLFIDEGRSETVIQSLITRLKVYPEVSDVNYIDRDQALEEFQRLSGFGEALSYLDSNPLPAVVMVTPSLKYSSPAGAREL LRKLEQEPEVSFGRLDIEWLERLQAVVKLLERTVLAIAALLVLAVVLVIGNTIRLAIMNRRSEIEVMKLVGATEAFIQRP FLYTGIWYGVIGGILAWVIINLLVWYLDSALVELLGLYGSTLHLESLTFGELGQLVLLASFLGWLGSYLSVRQHLRAIEP S
Sequences:
>Translated_321_residues MSQQPQLNRSKLPFSGRIVMFFIRHIQHAMASLGELWRNPISSIMTMAVLGVSLSLPAALQVLVKNAETITESWNSAAEI SLFIDEGRSETVIQSLITRLKVYPEVSDVNYIDRDQALEEFQRLSGFGEALSYLDSNPLPAVVMVTPSLKYSSPAGAREL LRKLEQEPEVSFGRLDIEWLERLQAVVKLLERTVLAIAALLVLAVVLVIGNTIRLAIMNRRSEIEVMKLVGATEAFIQRP FLYTGIWYGVIGGILAWVIINLLVWYLDSALVELLGLYGSTLHLESLTFGELGQLVLLASFLGWLGSYLSVRQHLRAIEP S >Mature_320_residues SQQPQLNRSKLPFSGRIVMFFIRHIQHAMASLGELWRNPISSIMTMAVLGVSLSLPAALQVLVKNAETITESWNSAAEIS LFIDEGRSETVIQSLITRLKVYPEVSDVNYIDRDQALEEFQRLSGFGEALSYLDSNPLPAVVMVTPSLKYSSPAGARELL RKLEQEPEVSFGRLDIEWLERLQAVVKLLERTVLAIAALLVLAVVLVIGNTIRLAIMNRRSEIEVMKLVGATEAFIQRPF LYTGIWYGVIGGILAWVIINLLVWYLDSALVELLGLYGSTLHLESLTFGELGQLVLLASFLGWLGSYLSVRQHLRAIEPS
Specific function: Not known. Is coded in an operon essential for cell division [H]
COG id: COG2177
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family. FtsX subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789872, Length=317, Percent_Identity=33.7539432176656, Blast_Score=189, Evalue=1e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004513 - InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 35780; Mature: 35649
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQPQLNRSKLPFSGRIVMFFIRHIQHAMASLGELWRNPISSIMTMAVLGVSLSLPAAL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVLVKNAETITESWNSAAEISLFIDEGRSETVIQSLITRLKVYPEVSDVNYIDRDQALEE HHHHHHHHHHHHCCCCHHEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH FQRLSGFGEALSYLDSNPLPAVVMVTPSLKYSSPAGARELLRKLEQEPEVSFGRLDIEWL HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH ERLQAVVKLLERTVLAIAALLVLAVVLVIGNTIRLAIMNRRSEIEVMKLVGATEAFIQRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHHHHHHHCC FLYTGIWYGVIGGILAWVIINLLVWYLDSALVELLGLYGSTLHLESLTFGELGQLVLLAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHH FLGWLGSYLSVRQHLRAIEPS HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQQPQLNRSKLPFSGRIVMFFIRHIQHAMASLGELWRNPISSIMTMAVLGVSLSLPAAL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVLVKNAETITESWNSAAEISLFIDEGRSETVIQSLITRLKVYPEVSDVNYIDRDQALEE HHHHHHHHHHHHCCCCHHEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH FQRLSGFGEALSYLDSNPLPAVVMVTPSLKYSSPAGARELLRKLEQEPEVSFGRLDIEWL HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH ERLQAVVKLLERTVLAIAALLVLAVVLVIGNTIRLAIMNRRSEIEVMKLVGATEAFIQRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHHHHHHHCC FLYTGIWYGVIGGILAWVIINLLVWYLDSALVELLGLYGSTLHLESLTFGELGQLVLLAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHH FLGWLGSYLSVRQHLRAIEPS HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]