Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622215

Identifier: 167622215

GI number: 167622215

Start: 329480

End: 329827

Strand: Direct

Name: 167622215

Synonym: Shal_0274

Alternate gene names: NA

Gene position: 329480-329827 (Clockwise)

Preceding gene: 167622213

Following gene: 167622216

Centisome position: 6.3

GC content: 45.11

Gene sequence:

>348_bases
ATGAGCTTGTTCAGCATGCCATTTGTTGATTCTGGAGTTGATACCGCGCTGCATAGTGTTGCTGCAGTGGTTATGGTGCT
TACGGTTGCGGCTGCTGCATTTGGATTTTGGAAAATTCACGACATGCCAATTAATAAAGCACACAAGGAACAGCATCACC
AAATAGGTTTGATTACTGCGCTGACTTGGATAGGTTTTATTTGGCACTGGGTATGGGTTATTGCGGTAATAGTTGCATTT
GTCGATGGTGAAAAGGCCCTGCGCCGAATTAGAGATGTGTGGCGCGAAAATGAACCCGCTACAGAGCAAACAGATGTAAC
AGTCAAAGAGGAGCAAACGAATGCTTGA

Upstream 100 bases:

>100_bases
ATAAAGTATCGATAATTGATACATAAGTGTACTTCATCTTGTGGTGATGAAAATAAAAGGCAAACTGCGCAGCCAAAACA
CTTTTTTGAGGTTTTTATCT

Downstream 100 bases:

>100_bases
GGGGTTAGCGGTATGGGCACTGTTTATTTATCTACTGCGCTTAGTCGGTATGCCATGGAACACCTACAGTAAGGCTTTTG
CTTACTTAGGTGGAACAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: Permease Facilitator Superfamily

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSLFSMPFVDSGVDTALHSVAAVVMVLTVAAAAFGFWKIHDMPINKAHKEQHHQIGLITALTWIGFIWHWVWVIAVIVAF
VDGEKALRRIRDVWRENEPATEQTDVTVKEEQTNA

Sequences:

>Translated_115_residues
MSLFSMPFVDSGVDTALHSVAAVVMVLTVAAAAFGFWKIHDMPINKAHKEQHHQIGLITALTWIGFIWHWVWVIAVIVAF
VDGEKALRRIRDVWRENEPATEQTDVTVKEEQTNA
>Mature_114_residues
SLFSMPFVDSGVDTALHSVAAVVMVLTVAAAAFGFWKIHDMPINKAHKEQHHQIGLITALTWIGFIWHWVWVIAVIVAFV
DGEKALRRIRDVWRENEPATEQTDVTVKEEQTNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12994; Mature: 12863

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFSMPFVDSGVDTALHSVAAVVMVLTVAAAAFGFWKIHDMPINKAHKEQHHQIGLITA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LTWIGFIWHWVWVIAVIVAFVDGEKALRRIRDVWRENEPATEQTDVTVKEEQTNA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure 
SLFSMPFVDSGVDTALHSVAAVVMVLTVAAAAFGFWKIHDMPINKAHKEQHHQIGLITA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LTWIGFIWHWVWVIAVIVAFVDGEKALRRIRDVWRENEPATEQTDVTVKEEQTNA
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA