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The map label for this gene is dsbB [C]

Identifier: 167622175

GI number: 167622175

Start: 281119

End: 281754

Strand: Reverse

Name: dsbB [C]

Synonym: Shal_0234

Alternate gene names: 167622175

Gene position: 281754-281119 (Counterclockwise)

Preceding gene: 167622176

Following gene: 167622173

Centisome position: 5.39

GC content: 47.96

Gene sequence:

>636_bases
ATGTCATTGCAGCAACGATTGAAAGAGTTCTGGAGGCAGTTTAAGGCCACCCCTGCCGACAGCTTAACCCATATGCAAGA
CCATCGACCCATCTGGTTAGTGATGGTTGGAGGAGCACTATTTCTTATTTTGTCGGCCATCTTCTATTTCCAACTGTTCT
TGGCGATGGATCCCTGTGAGCTATGTGTTTACATTCGCTTTAGCCAGTGCTGTATCGTGCTTGCGGGTCTGATCATTCTG
ATCGATCCGAGAAATCACATACTCAAGTTCTTAGGTTTATTACTGGCGTGGTACGCAGTCATTCAGGGCTGGATGTGGTC
TGTTGAGTTAATGAAGATCCATGATGCGGCGCATATGGTAGTCGATGAGACGATGGACTTCTTTGCTGCTGCAGGCGATG
CTGCTGGCTCAGCTTGTTCAACCGATCCACGCTTCCCACTCAACCTACCACTTGATGAATGGCTACCATTTGAGTTTGCT
CCAACGGGCGGCTGTGGTGAAGACGATTGGACTCTACTGGGCATGAATATGGCACATTACTGCATAATCGCTTATACCGT
ATTTATGGTCTGTTTGGCGCCGTTGACCTTTGGTTGGGTTCGCTCACTGAAGAAGCTTCTTCCGCTTAAGAAGTAA

Upstream 100 bases:

>100_bases
TACCGTTAACGGCAAATACCTGATCAACACCAAATCAATCCGTTCGATGGATATGCTCAAAGAGCTTATCGCTGAACTGT
CTGCTAAATAGGGGATTATT

Downstream 100 bases:

>100_bases
TGACTAATCAACCATGCGTTATTAAAAACTGTGGCCACTAACTTTAGTGGCCACAGTTAACAGTGACCAAAACATCGATA
ATTTAACTGATCTGTTACCC

Product: disulfide bond formation protein DsbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSLQQRLKEFWRQFKATPADSLTHMQDHRPIWLVMVGGALFLILSAIFYFQLFLAMDPCELCVYIRFSQCCIVLAGLIIL
IDPRNHILKFLGLLLAWYAVIQGWMWSVELMKIHDAAHMVVDETMDFFAAAGDAAGSACSTDPRFPLNLPLDEWLPFEFA
PTGGCGEDDWTLLGMNMAHYCIIAYTVFMVCLAPLTFGWVRSLKKLLPLKK

Sequences:

>Translated_211_residues
MSLQQRLKEFWRQFKATPADSLTHMQDHRPIWLVMVGGALFLILSAIFYFQLFLAMDPCELCVYIRFSQCCIVLAGLIIL
IDPRNHILKFLGLLLAWYAVIQGWMWSVELMKIHDAAHMVVDETMDFFAAAGDAAGSACSTDPRFPLNLPLDEWLPFEFA
PTGGCGEDDWTLLGMNMAHYCIIAYTVFMVCLAPLTFGWVRSLKKLLPLKK
>Mature_210_residues
SLQQRLKEFWRQFKATPADSLTHMQDHRPIWLVMVGGALFLILSAIFYFQLFLAMDPCELCVYIRFSQCCIVLAGLIILI
DPRNHILKFLGLLLAWYAVIQGWMWSVELMKIHDAAHMVVDETMDFFAAAGDAAGSACSTDPRFPLNLPLDEWLPFEFAP
TGGCGEDDWTLLGMNMAHYCIIAYTVFMVCLAPLTFGWVRSLKKLLPLKK

Specific function: May be required for disulfide bond formation in some proteins (Potential) [H]

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbB family. DsbI subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787433, Length=169, Percent_Identity=27.810650887574, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003752 [H]

Pfam domain/function: PF02600 DsbB [H]

EC number: NA

Molecular weight: Translated: 24015; Mature: 23884

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQQRLKEFWRQFKATPADSLTHMQDHRPIWLVMVGGALFLILSAIFYFQLFLAMDPCE
CCHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHH
LCVYIRFSQCCIVLAGLIILIDPRNHILKFLGLLLAWYAVIQGWMWSVELMKIHDAAHMV
HHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDETMDFFAAAGDAAGSACSTDPRFPLNLPLDEWLPFEFAPTGGCGEDDWTLLGMNMAHY
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCEECCCCCCCCCCCEEECHHHHHH
CIIAYTVFMVCLAPLTFGWVRSLKKLLPLKK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLQQRLKEFWRQFKATPADSLTHMQDHRPIWLVMVGGALFLILSAIFYFQLFLAMDPCE
CHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCHHH
LCVYIRFSQCCIVLAGLIILIDPRNHILKFLGLLLAWYAVIQGWMWSVELMKIHDAAHMV
HHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDETMDFFAAAGDAAGSACSTDPRFPLNLPLDEWLPFEFAPTGGCGEDDWTLLGMNMAHY
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCEECCCCCCCCCCCEEECHHHHHH
CIIAYTVFMVCLAPLTFGWVRSLKKLLPLKK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]