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The map label for this gene is fixA [H]

Identifier: 167622160

GI number: 167622160

Start: 263782

End: 264555

Strand: Reverse

Name: fixA [H]

Synonym: Shal_0219

Alternate gene names: 167622160

Gene position: 264555-263782 (Counterclockwise)

Preceding gene: 167622170

Following gene: 167622159

Centisome position: 5.06

GC content: 45.35

Gene sequence:

>774_bases
ATGAAAATTATTACGTGTTACAAATTAGTGCCTGAAGAGCAAGATATCACAGTAGCTGCCGATGGTAGCTTAGATACTAA
CAAGGCCGCACCTAAAATTAACCCATTCGATCTCTGTGCTGTTGAAGCGGGTGTTCAACTAAAAAGCTTAATCGAAGGAT
GCAGCATTACTGCAATGAGTGTTGGCGGCAAAGCACTAGAAAACCCTAAAGCACGCAAAGATATTCTTTCCCGTGGACCA
GATGACTTAACCGTCGTTATTGATGAAAAATTTGAACAACTGCTACCACACCAGACTGCCAGAGTATTAATGGCGGCGGC
TCAAAAAAGTGGTTTCGACCTAATTATCTGTGGTGACGGTTCTGGCGACCTTTACGCTCAGCAAGTTGGCTTACAGTTAG
GTGAGCTACTCGGTGTTGCGAATATCAATGCTGTAAGCAAGATCATCTCAGCAGAACCTGGAAAACTTACCGTAGAAAGA
GCGTTAGACAATGAAGTAGAAGTCCTAGAAATTACTCTACCGGCTGTTATCTCCGTTTCTGCAGACATTAACGAGCCAAG
CATTCCATCGATGAAAACCATTCTCGCCGCCGCGAAAAAGCCTGTCACCAGCTTAAGCGCGACAGAGCTCGAGCTAACAG
AGTTCCCTGCACTGGTTGAGCTAGTTTCAGTTATCGCGCCTGAGCAAAAAGCACGTCAGAAGATCGTTATCGAAGGTGAT
GACGAGCAGCAGATCGCCCAATTCGCAGAACACTTACGTAACGCACTTAACTAA

Upstream 100 bases:

>100_bases
TAGACGTTAAGTTTAAAACAACTACGTTAAGTAAGTGATGCATAAAAAGTACATCTTTATATTAGGTTTATAAATACTTG
ATATTCTAACGGGAGAAATA

Downstream 100 bases:

>100_bases
TTAAGGATAAATGATGAGCAAACTATCTAATATTTGGGTATTTAGCGATATCGCTTCCCGTTTACCTGAAATGATCGCGG
CTGGCGTAGCGTTAGGCGAA

Product: putative electron transfer flavoprotein FixA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKIITCYKLVPEEQDITVAADGSLDTNKAAPKINPFDLCAVEAGVQLKSLIEGCSITAMSVGGKALENPKARKDILSRGP
DDLTVVIDEKFEQLLPHQTARVLMAAAQKSGFDLIICGDGSGDLYAQQVGLQLGELLGVANINAVSKIISAEPGKLTVER
ALDNEVEVLEITLPAVISVSADINEPSIPSMKTILAAAKKPVTSLSATELELTEFPALVELVSVIAPEQKARQKIVIEGD
DEQQIAQFAEHLRNALN

Sequences:

>Translated_257_residues
MKIITCYKLVPEEQDITVAADGSLDTNKAAPKINPFDLCAVEAGVQLKSLIEGCSITAMSVGGKALENPKARKDILSRGP
DDLTVVIDEKFEQLLPHQTARVLMAAAQKSGFDLIICGDGSGDLYAQQVGLQLGELLGVANINAVSKIISAEPGKLTVER
ALDNEVEVLEITLPAVISVSADINEPSIPSMKTILAAAKKPVTSLSATELELTEFPALVELVSVIAPEQKARQKIVIEGD
DEQQIAQFAEHLRNALN
>Mature_257_residues
MKIITCYKLVPEEQDITVAADGSLDTNKAAPKINPFDLCAVEAGVQLKSLIEGCSITAMSVGGKALENPKARKDILSRGP
DDLTVVIDEKFEQLLPHQTARVLMAAAQKSGFDLIICGDGSGDLYAQQVGLQLGELLGVANINAVSKIISAEPGKLTVER
ALDNEVEVLEITLPAVISVSADINEPSIPSMKTILAAAKKPVTSLSATELELTEFPALVELVSVIAPEQKARQKIVIEGD
DEQQIAQFAEHLRNALN

Specific function: Required for anaerobic carnitine reduction. May bring reductant to CaiA [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Escherichia coli, GI87081682, Length=257, Percent_Identity=61.8677042801556, Blast_Score=282, Evalue=2e-77,
Organism=Escherichia coli, GI2367123, Length=257, Percent_Identity=50.9727626459144, Blast_Score=249, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI25141345, Length=182, Percent_Identity=26.3736263736264, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321646, Length=208, Percent_Identity=27.8846153846154, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27378; Mature: 27378

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIITCYKLVPEEQDITVAADGSLDTNKAAPKINPFDLCAVEAGVQLKSLIEGCSITAMS
CEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCEEEEE
VGGKALENPKARKDILSRGPDDLTVVIDEKFEQLLPHQTARVLMAAAQKSGFDLIICGDG
CCCHHHCCCHHHHHHHHCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECC
SGDLYAQQVGLQLGELLGVANINAVSKIISAEPGKLTVERALDNEVEVLEITLPAVISVS
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEHHHHCCCCEEEEEEEECEEEEEE
ADINEPSIPSMKTILAAAKKPVTSLSATELELTEFPALVELVSVIAPEQKARQKIVIEGD
CCCCCCCCCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHCCEEEEECC
DEQQIAQFAEHLRNALN
CHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIITCYKLVPEEQDITVAADGSLDTNKAAPKINPFDLCAVEAGVQLKSLIEGCSITAMS
CEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCEEEEE
VGGKALENPKARKDILSRGPDDLTVVIDEKFEQLLPHQTARVLMAAAQKSGFDLIICGDG
CCCHHHCCCHHHHHHHHCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECC
SGDLYAQQVGLQLGELLGVANINAVSKIISAEPGKLTVERALDNEVEVLEITLPAVISVS
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEHHHHCCCCEEEEEEEECEEEEEE
ADINEPSIPSMKTILAAAKKPVTSLSATELELTEFPALVELVSVIAPEQKARQKIVIEGD
CCCCCCCCCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCHHHCCEEEEECC
DEQQIAQFAEHLRNALN
CHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA