Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622145

Identifier: 167622145

GI number: 167622145

Start: 245375

End: 246397

Strand: Direct

Name: 167622145

Synonym: Shal_0204

Alternate gene names: NA

Gene position: 245375-246397 (Clockwise)

Preceding gene: 167622144

Following gene: 167622146

Centisome position: 4.69

GC content: 41.45

Gene sequence:

>1023_bases
ATGAATATCTTTAGCTTCCTATTTGGTGCGCCGATAAAGCCTATCCGTAACAGTAATAATTTAACTGCAGCCCCAAATGA
GCTTGCAGAGTTTAAGCTGTATTACCAACAATACCTTGAACCGTTAACGAGTAAGTTTGAAAGTGCACGAGTAGCGAGTC
TAAAGTCCTGTCGTCAGCGATTATATCTCTGCAGCGCCATCTATCTTGGTATCGTGGCCTTGGCATTTATGTTTACGCCT
TACTTAAATATTTCAGATCCTATGATCATCTATCTTATTGGGTTAGTAGTACTGGCACTGCCGTTTGCTTGGTGGGTGTT
CAATCCGATTAAGCATTATAAAGCCGATGTGAAGCAGAGAATTTACCCGCTAATTTTTAAATACTTTGGCCATGACTTTA
TCTTTTGCCGAGAGCATAAGATGAGTCTTGCTACACTAAAGGCGTCGAAGTTACTGCCCTATTACGATGCCGCTAATTTT
GATGATTATGTGCAGGGTACATATAAGAGCATTGAGATCGCTATTAACGAACTGCATCTAACCAAGCAGGTTAAGCGCGA
GAAAAATACCAATACCGTTACCGTCTTTAAAGGGGTGATGATTGAGCTCAGTAACCATAAAGATTTTCGCGGCCATACCG
TGGTGGTGAAGAGTCGTGGTGGTTTGGTTAATTTCCTATCTGATTCATTTAAGGGCTTGGAGCGAGTAAAGCTTGAAGAT
CCAATCTTCGAGAAACAGTTTGATGTGTTCTCTACCGATCAAATAGAAGCCCGTTACCTGTTAACCGTGACTTTTATGGA
GCGACTGCAGGAGCTATCGGCCAGTTTTGGCAATAAAATTCAATGTGCTTTTTACCGTAATAAGTTGTTGATCATGCTAG
GCAGTAAAGACAACCGCTTCGAGATGACGTCCATCTTCAAGGCTGCGACATTTGAATATGAGTTCAGTCAGATCAATAAA
GAGATGAAGCAACTATTTGCTATAGTTGATGTACTGCAACTGGAGCGAACAACCGGATTATGA

Upstream 100 bases:

>100_bases
TGATTATCTAAGGTAATCCCTCCTTATCATTGCTGCAGCGCAGAGTTGCGCTGCGGATTCTTGTCGCTATTAAATCGCTT
TGCAGCGTACAGGCAATAAA

Downstream 100 bases:

>100_bases
TGAAGCAGGGAGTGCTGATAGGTTTGCTATTAACCTCAGTGGCTGCAATCGCTGAGACGGATAAGCCTCACTTTGTCGCC
AAGCCGTCGAGTAAGAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNIFSFLFGAPIKPIRNSNNLTAAPNELAEFKLYYQQYLEPLTSKFESARVASLKSCRQRLYLCSAIYLGIVALAFMFTP
YLNISDPMIIYLIGLVVLALPFAWWVFNPIKHYKADVKQRIYPLIFKYFGHDFIFCREHKMSLATLKASKLLPYYDAANF
DDYVQGTYKSIEIAINELHLTKQVKREKNTNTVTVFKGVMIELSNHKDFRGHTVVVKSRGGLVNFLSDSFKGLERVKLED
PIFEKQFDVFSTDQIEARYLLTVTFMERLQELSASFGNKIQCAFYRNKLLIMLGSKDNRFEMTSIFKAATFEYEFSQINK
EMKQLFAIVDVLQLERTTGL

Sequences:

>Translated_340_residues
MNIFSFLFGAPIKPIRNSNNLTAAPNELAEFKLYYQQYLEPLTSKFESARVASLKSCRQRLYLCSAIYLGIVALAFMFTP
YLNISDPMIIYLIGLVVLALPFAWWVFNPIKHYKADVKQRIYPLIFKYFGHDFIFCREHKMSLATLKASKLLPYYDAANF
DDYVQGTYKSIEIAINELHLTKQVKREKNTNTVTVFKGVMIELSNHKDFRGHTVVVKSRGGLVNFLSDSFKGLERVKLED
PIFEKQFDVFSTDQIEARYLLTVTFMERLQELSASFGNKIQCAFYRNKLLIMLGSKDNRFEMTSIFKAATFEYEFSQINK
EMKQLFAIVDVLQLERTTGL
>Mature_340_residues
MNIFSFLFGAPIKPIRNSNNLTAAPNELAEFKLYYQQYLEPLTSKFESARVASLKSCRQRLYLCSAIYLGIVALAFMFTP
YLNISDPMIIYLIGLVVLALPFAWWVFNPIKHYKADVKQRIYPLIFKYFGHDFIFCREHKMSLATLKASKLLPYYDAANF
DDYVQGTYKSIEIAINELHLTKQVKREKNTNTVTVFKGVMIELSNHKDFRGHTVVVKSRGGLVNFLSDSFKGLERVKLED
PIFEKQFDVFSTDQIEARYLLTVTFMERLQELSASFGNKIQCAFYRNKLLIMLGSKDNRFEMTSIFKAATFEYEFSQINK
EMKQLFAIVDVLQLERTTGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39440; Mature: 39440

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFSFLFGAPIKPIRNSNNLTAAPNELAEFKLYYQQYLEPLTSKFESARVASLKSCRQR
CCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYLCSAIYLGIVALAFMFTPYLNISDPMIIYLIGLVVLALPFAWWVFNPIKHYKADVKQR
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYPLIFKYFGHDFIFCREHKMSLATLKASKLLPYYDAANFDDYVQGTYKSIEIAINELHL
HHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TKQVKREKNTNTVTVFKGVMIELSNHKDFRGHTVVVKSRGGLVNFLSDSFKGLERVKLED
HHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC
PIFEKQFDVFSTDQIEARYLLTVTFMERLQELSASFGNKIQCAFYRNKLLIMLGSKDNRF
CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECEEEEEECCCCCCC
EMTSIFKAATFEYEFSQINKEMKQLFAIVDVLQLERTTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIFSFLFGAPIKPIRNSNNLTAAPNELAEFKLYYQQYLEPLTSKFESARVASLKSCRQR
CCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYLCSAIYLGIVALAFMFTPYLNISDPMIIYLIGLVVLALPFAWWVFNPIKHYKADVKQR
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYPLIFKYFGHDFIFCREHKMSLATLKASKLLPYYDAANFDDYVQGTYKSIEIAINELHL
HHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TKQVKREKNTNTVTVFKGVMIELSNHKDFRGHTVVVKSRGGLVNFLSDSFKGLERVKLED
HHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC
PIFEKQFDVFSTDQIEARYLLTVTFMERLQELSASFGNKIQCAFYRNKLLIMLGSKDNRF
CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECEEEEEECCCCCCC
EMTSIFKAATFEYEFSQINKEMKQLFAIVDVLQLERTTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA