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The map label for this gene is lemA [H]

Identifier: 167622144

GI number: 167622144

Start: 244721

End: 245290

Strand: Direct

Name: lemA [H]

Synonym: Shal_0203

Alternate gene names: 167622144

Gene position: 244721-245290 (Clockwise)

Preceding gene: 167622141

Following gene: 167622145

Centisome position: 4.68

GC content: 44.91

Gene sequence:

>570_bases
ATGGAAGGGATTTTGTTGGGATCAGGCTTAGTCGTGATTATTGCCTACCTTTGGTACGTGAGTTTAATAAAAAAACGTAA
TACGGGGCGTGAGGCGCTATCGGGCATAGACGTTCAGCTTAAGAAGCGCTCTAACCTCGTGCCCAATATTCTCAAGATTG
CGCAAAAATATATGGATCATGAGAAGTCTCTGCTAACAGAGATCACCGAATTAAGAACCTTAGCCACTAAAGGTTATGAT
AGCGTCGATCCCGCTGCCGTAAAAACTCACCTCGAAGTATCAGAGAAGCTTAATCAAAAGATGTCACAGTTGATGGTGAG
TGTCGAAAGCTATCCAGAGTTGAAGTCAGACAATACCATGCTACAAGCGATGCAGACCTATAACGAGGTTGAGGCTCAGC
TGTCTGCTGCACGTCGTTTCTATAACGCTGCAGTATCAGAGCTAAATACCGCAGTAGAGATCTTCCCCGGCTCTATCATT
GCATCGATAGCAAATGTGAAGGTGATGCCTTTCTATGAAGCCGATGAGGCATCAAAGGCCCCGGTAAATGCCACTGATTA
TCTAAGGTAA

Upstream 100 bases:

>100_bases
ATAAGTAAATGGCGTATCACTTTTATTTTGGTTAAAAGGCATATAGTTCAGAAGGTGAAAGTGAAGCCGTTTCAATTAAA
AAAATAAATAGGAAGCCGAG

Downstream 100 bases:

>100_bases
TCCCTCCTTATCATTGCTGCAGCGCAGAGTTGCGCTGCGGATTCTTGTCGCTATTAAATCGCTTTGCAGCGTACAGGCAA
TAAAATGAATATCTTTAGCT

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MEGILLGSGLVVIIAYLWYVSLIKKRNTGREALSGIDVQLKKRSNLVPNILKIAQKYMDHEKSLLTEITELRTLATKGYD
SVDPAAVKTHLEVSEKLNQKMSQLMVSVESYPELKSDNTMLQAMQTYNEVEAQLSAARRFYNAAVSELNTAVEIFPGSII
ASIANVKVMPFYEADEASKAPVNATDYLR

Sequences:

>Translated_189_residues
MEGILLGSGLVVIIAYLWYVSLIKKRNTGREALSGIDVQLKKRSNLVPNILKIAQKYMDHEKSLLTEITELRTLATKGYD
SVDPAAVKTHLEVSEKLNQKMSQLMVSVESYPELKSDNTMLQAMQTYNEVEAQLSAARRFYNAAVSELNTAVEIFPGSII
ASIANVKVMPFYEADEASKAPVNATDYLR
>Mature_189_residues
MEGILLGSGLVVIIAYLWYVSLIKKRNTGREALSGIDVQLKKRSNLVPNILKIAQKYMDHEKSLLTEITELRTLATKGYD
SVDPAAVKTHLEVSEKLNQKMSQLMVSVESYPELKSDNTMLQAMQTYNEVEAQLSAARRFYNAAVSELNTAVEIFPGSII
ASIANVKVMPFYEADEASKAPVNATDYLR

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 21033; Mature: 21033

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGILLGSGLVVIIAYLWYVSLIKKRNTGREALSGIDVQLKKRSNLVPNILKIAQKYMDH
CCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEHHHCCCCHHHHHHHHHHHHH
EKSLLTEITELRTLATKGYDSVDPAAVKTHLEVSEKLNQKMSQLMVSVESYPELKSDNTM
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LQAMQTYNEVEAQLSAARRFYNAAVSELNTAVEIFPGSIIASIANVKVMPFYEADEASKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCCCCCCC
PVNATDYLR
CCCHHCCCC
>Mature Secondary Structure
MEGILLGSGLVVIIAYLWYVSLIKKRNTGREALSGIDVQLKKRSNLVPNILKIAQKYMDH
CCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEHHHCCCCHHHHHHHHHHHHH
EKSLLTEITELRTLATKGYDSVDPAAVKTHLEVSEKLNQKMSQLMVSVESYPELKSDNTM
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LQAMQTYNEVEAQLSAARRFYNAAVSELNTAVEIFPGSIIASIANVKVMPFYEADEASKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCCCCCCC
PVNATDYLR
CCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]