Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622137

Identifier: 167622137

GI number: 167622137

Start: 231805

End: 232494

Strand: Direct

Name: 167622137

Synonym: Shal_0196

Alternate gene names: NA

Gene position: 231805-232494 (Clockwise)

Preceding gene: 167622135

Following gene: 167622138

Centisome position: 4.43

GC content: 48.55

Gene sequence:

>690_bases
ATGAGCAAAATTGAATCGTTTGCTGCTATCTATGCCAGAGCATCGCAGCGAAAAGGGGGCGACCAAAGCCTAGGAAGCCT
GTTACCGACAGGCCTTCGCAGCGAAGAGATAGAACAATTTTCCGATGCTGTTCTGTTATCTGAGATCAGCAAGAAGGTGT
TTCAGAGTGGTTTTGTATGGCGGATTGTCGAAGCCAATTGGCCGGAATATGAGAAAGCCTTCTTTGGCTTTGAGCCATTT
AAAGTGCTGATGTTGTCGCCGGAACAGTTACAAGATCGCGCAAGTGATCCTAAATTGATCCGCCACCTCAAAAAAACCAT
GGCGATCTATGACAATGCCCATATGGTGAATGATCTTGCGGGTGAGCACGGCAGTTTCGCCAAGTTTATTGCAGACTGGC
CGAGTGAAGATATTACCGGACTTTGGGCCGAGCTTAAACGTAAAGGTGCTAGGCTCGGTGGTAACACTGGCCCTTACTTC
CTACGCTCTATGGGCAAGGACACCTTTCTATTAACGGCTGATGTGCAAGGGTATTTGAAGAGCCACGGCCTCGTGGATTA
CGGCTTTAGCTCTAAGGCAGGATTGAAGCAGGTGCAGAGCGTGTTTAACCACTGGCAGCAAGAATCGGGTCGTAGCCTAG
CCGATATCAGTAGAGTCTTAGCCTGCAGTGTTGGTGATAATCGTGTTTAA

Upstream 100 bases:

>100_bases
ATTCAGATCTTTGAGTGATAAAGATATGCCGCTTCAACTGTTTAGTGAATATAAGGGATGGCTTAATTTATTTAATCTCT
AATTTTGAAGAGTGAAAAGT

Downstream 100 bases:

>100_bases
ACTAAAACCTGTATTTTGAGATGAGTTAGTCGGCATAAAAACCTTTTAAATTAACGAGTAATACTAGATTAATGTTAATG
CTTTAATTGTTAATCATACT

Product: 3-methyladenine DNA glycosylase

Products: NA

Alternate protein names: DNA-3-Methyladenine Glycosylase; 3-Methyladenine DNA Glycosylase-Like Protein; 3-Methyl-Adenine DNA Glycosylase; DNA Glycosylase Protein; DNA-3-Methyladenine Glycosylase I; DNA-Glycosylase

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSKIESFAAIYARASQRKGGDQSLGSLLPTGLRSEEIEQFSDAVLLSEISKKVFQSGFVWRIVEANWPEYEKAFFGFEPF
KVLMLSPEQLQDRASDPKLIRHLKKTMAIYDNAHMVNDLAGEHGSFAKFIADWPSEDITGLWAELKRKGARLGGNTGPYF
LRSMGKDTFLLTADVQGYLKSHGLVDYGFSSKAGLKQVQSVFNHWQQESGRSLADISRVLACSVGDNRV

Sequences:

>Translated_229_residues
MSKIESFAAIYARASQRKGGDQSLGSLLPTGLRSEEIEQFSDAVLLSEISKKVFQSGFVWRIVEANWPEYEKAFFGFEPF
KVLMLSPEQLQDRASDPKLIRHLKKTMAIYDNAHMVNDLAGEHGSFAKFIADWPSEDITGLWAELKRKGARLGGNTGPYF
LRSMGKDTFLLTADVQGYLKSHGLVDYGFSSKAGLKQVQSVFNHWQQESGRSLADISRVLACSVGDNRV
>Mature_228_residues
SKIESFAAIYARASQRKGGDQSLGSLLPTGLRSEEIEQFSDAVLLSEISKKVFQSGFVWRIVEANWPEYEKAFFGFEPFK
VLMLSPEQLQDRASDPKLIRHLKKTMAIYDNAHMVNDLAGEHGSFAKFIADWPSEDITGLWAELKRKGARLGGNTGPYFL
RSMGKDTFLLTADVQGYLKSHGLVDYGFSSKAGLKQVQSVFNHWQQESGRSLADISRVLACSVGDNRV

Specific function: Unknown

COG id: COG2818

COG function: function code L; 3-methyladenine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25560; Mature: 25429

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIESFAAIYARASQRKGGDQSLGSLLPTGLRSEEIEQFSDAVLLSEISKKVFQSGFVW
CCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
RIVEANWPEYEKAFFGFEPFKVLMLSPEQLQDRASDPKLIRHLKKTMAIYDNAHMVNDLA
EEEECCCCHHHHHHCCCCCHHHEEECHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHH
GEHGSFAKFIADWPSEDITGLWAELKRKGARLGGNTGPYFLRSMGKDTFLLTADVQGYLK
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEHHHHHHHH
SHGLVDYGFSSKAGLKQVQSVFNHWQQESGRSLADISRVLACSVGDNRV
HCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKIESFAAIYARASQRKGGDQSLGSLLPTGLRSEEIEQFSDAVLLSEISKKVFQSGFVW
CHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
RIVEANWPEYEKAFFGFEPFKVLMLSPEQLQDRASDPKLIRHLKKTMAIYDNAHMVNDLA
EEEECCCCHHHHHHCCCCCHHHEEECHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHH
GEHGSFAKFIADWPSEDITGLWAELKRKGARLGGNTGPYFLRSMGKDTFLLTADVQGYLK
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEHHHHHHHH
SHGLVDYGFSSKAGLKQVQSVFNHWQQESGRSLADISRVLACSVGDNRV
HCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA