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The map label for this gene is 167622135

Identifier: 167622135

GI number: 167622135

Start: 230394

End: 230966

Strand: Direct

Name: 167622135

Synonym: Shal_0194

Alternate gene names: NA

Gene position: 230394-230966 (Clockwise)

Preceding gene: 167622134

Following gene: 167622137

Centisome position: 4.41

GC content: 46.77

Gene sequence:

>573_bases
ATGAATCTCTATTTTAGGCTTATTTGGTTATTTCTTTGGCGTAAGCGCCACTGCAACAAGATCGACTTCTTAGGCACTAG
CCGCTTGGCATATCGCGCACTGCCGACAGATTGTGATATCAATTTCCACCTGACTAATTCTCGTTATCCCGCGTTTATGG
ATCTCGCGCGTACCTATATGATGGCCGAGATGGGCTTCTTGAAACGTTTCTTAACGTTAGGCTGGATGCCTATCGTTAAC
GCTGCGGAATTTACCTATATCCGCGACATCAAGCCGTTCGCTAAGTTTGAAATTGAAACCAAGCTGGTGGGGTGGGATGA
AAAGTATTTCTATATTGAACAGCGCTTCGTCAGTGAGCGCGGCTTACATTGTATTGCTCATGTGCGTGGCGTATTTGTCT
GTAAGCGCAAGCAAGTGGCTATCACTACCATGCTTGAAGAAGTGGGCTTTAATGAGCCTGCACCTCAATTGCCGCCAGAG
GTGATTAAGTGGAAGAGTTTTTTGCAGCTTAAGAAAGAGTGCAACCTCCCAAGCCCTACGGGGGAGCCGATAGAATTTAG
AGCGGCGAGTTAA

Upstream 100 bases:

>100_bases
TTAAAGCGCCTTTTTTACATGCGTCAGTTCACACTTGTTATCAGGTATGACCTCTGCTAGCCTTGCGCTTCATATTTAGG
TTGCAAGCTGTGAGTCATCA

Downstream 100 bases:

>100_bases
GTGTGCACTACCTGCTCATTTTGGCCTGTTGTGGCGAGGGTGAGCTCGATCTCTTCTATCACTTGGTTTACTGAACCGCG
TAACTTGGCTTGGATCCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Domain-Containing Protein; Thioesterase Family Protein; Acyl-CoA Thioesterase; Thioesterase Family Domain-Containing Protein

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MNLYFRLIWLFLWRKRHCNKIDFLGTSRLAYRALPTDCDINFHLTNSRYPAFMDLARTYMMAEMGFLKRFLTLGWMPIVN
AAEFTYIRDIKPFAKFEIETKLVGWDEKYFYIEQRFVSERGLHCIAHVRGVFVCKRKQVAITTMLEEVGFNEPAPQLPPE
VIKWKSFLQLKKECNLPSPTGEPIEFRAAS

Sequences:

>Translated_190_residues
MNLYFRLIWLFLWRKRHCNKIDFLGTSRLAYRALPTDCDINFHLTNSRYPAFMDLARTYMMAEMGFLKRFLTLGWMPIVN
AAEFTYIRDIKPFAKFEIETKLVGWDEKYFYIEQRFVSERGLHCIAHVRGVFVCKRKQVAITTMLEEVGFNEPAPQLPPE
VIKWKSFLQLKKECNLPSPTGEPIEFRAAS
>Mature_190_residues
MNLYFRLIWLFLWRKRHCNKIDFLGTSRLAYRALPTDCDINFHLTNSRYPAFMDLARTYMMAEMGFLKRFLTLGWMPIVN
AAEFTYIRDIKPFAKFEIETKLVGWDEKYFYIEQRFVSERGLHCIAHVRGVFVCKRKQVAITTMLEEVGFNEPAPQLPPE
VIKWKSFLQLKKECNLPSPTGEPIEFRAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7706200, Length=155, Percent_Identity=31.6129032258064, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6319572, Length=155, Percent_Identity=29.6774193548387, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24640045, Length=181, Percent_Identity=25.9668508287293, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22474; Mature: 22474

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLYFRLIWLFLWRKRHCNKIDFLGTSRLAYRALPTDCDINFHLTNSRYPAFMDLARTYM
CCHHHHHHHHHHHHHHCCCEECCCCCCHHHEEECCCCCCEEEEEECCCCHHHHHHHHHHH
MAEMGFLKRFLTLGWMPIVNAAEFTYIRDIKPFAKFEIETKLVGWDEKYFYIEQRFVSER
HHHHHHHHHHHHHCCHHHCCCHHHHHHHCCCHHHHEEEEEEEECCCCCEEHHHHHHHHHC
GLHCIAHVRGVFVCKRKQVAITTMLEEVGFNEPAPQLPPEVIKWKSFLQLKKECNLPSPT
CCHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
GEPIEFRAAS
CCCEEEEECC
>Mature Secondary Structure
MNLYFRLIWLFLWRKRHCNKIDFLGTSRLAYRALPTDCDINFHLTNSRYPAFMDLARTYM
CCHHHHHHHHHHHHHHCCCEECCCCCCHHHEEECCCCCCEEEEEECCCCHHHHHHHHHHH
MAEMGFLKRFLTLGWMPIVNAAEFTYIRDIKPFAKFEIETKLVGWDEKYFYIEQRFVSER
HHHHHHHHHHHHHCCHHHCCCHHHHHHHCCCHHHHEEEEEEEECCCCCEEHHHHHHHHHC
GLHCIAHVRGVFVCKRKQVAITTMLEEVGFNEPAPQLPPEVIKWKSFLQLKKECNLPSPT
CCHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
GEPIEFRAAS
CCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA