Click here to switch to the map view.

The map label for this gene is 167622104

Identifier: 167622104

GI number: 167622104

Start: 189172

End: 189837

Strand: Direct

Name: 167622104

Synonym: Shal_0163

Alternate gene names: NA

Gene position: 189172-189837 (Clockwise)

Preceding gene: 167622103

Following gene: 167622109

Centisome position: 3.62

GC content: 51.5

Gene sequence:

>666_bases
ATGTTGGCCGCGGGTGTTACCGCGCCGCTCACACAGGCAAAGCCAACAGTAACTTTCTCGCCGTTCCAGGCCGGAAAATA
TCGTATTTTGGCTTTAGTGTTTGACGACTATGAAACTTTAGATCTGCATGGTCCGGTAGAGATGTTAGGCCATATGCCGA
ATGCCGAGATCAAGCTGGTGGCCACCAAGGAGATAGTCAAAAGCTATCAGGGGCCACGGATGGTCGCCGATTGCCTGACA
AACCAGACATACGACTGCGACCTATTGTTAATCCCTGGTGGGCTAGGCACTCGCACGTTAGTCAGTGATATAGCATTGCG
CCAATGGCTGGTAGAGCAGGTTACTCGCAGTCAAAACGTGTTTACCGTGTGCACTGGCACTGCGTTGCTGGCCATGACCT
CGGTCCTTAACGGGCGTAAAGCCACCACCAATAAAATGGCTTTTGAGTGGGTGACATCACTGAATGATAACCCACAGTGG
CAACCCAAAGCGCGCTGGGTATTTGATGGTAAGTTCTTAACTTCATCAGGGGTCTCTGCAGGCACCGATGCGGCGCTGTT
TTGGGTTAAACACTTGCATGGTGAGCAGGAAGCGAGGCGGATTGAAGCTTTAACCGAGTACAGCTGGAATCAAGATGCCA
GTAACGATCCCTATGCCGTGGTTTAG

Upstream 100 bases:

>100_bases
GAATTAATCTTTTTTTTCATTGACTAAGTCTGCATAAGATACAGAGGTTGATGGGGAACAAATAGTGCAACGTAGACAGT
TTATAAAAGGGGCTTCGCTG

Downstream 100 bases:

>100_bases
AAATAGCCGTCTTTTACTCGTTTGTTGTAAAAGAGTTTCATAAGTAAATGATCTAGCCTTATCCAATTAAGCTATTAATT
AGTAATAAAGGATCTTGGCG

Product: ThiJ/PfpI domain-containing protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain Protein; AraC Family Transcriptional Regulator; ThiJ/PfpI Family Protein; Transcriptional Regulator; Transcriptional Regulator AraC Family; DJ-1/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family; Isonitrile Hydratase; AraC Family Transcription Regulator; ThiJ Family Protein; Twin-Arginine Translocation Pathway Signal; AraC Family Regulatory Helix-Turn-Helix Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; ADPA-Family Transcriptional Regulator; ADPA Family Transcriptional Regulator; Intracellular Protease/Amidase; Intracellular Protease/Amidase Protein; GATase1_AraC_1 Family Transcriptional Regulator; Transcriptional Regulator Protein; DJ-1 Family Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; Secreted Protein; ThiJ/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MLAAGVTAPLTQAKPTVTFSPFQAGKYRILALVFDDYETLDLHGPVEMLGHMPNAEIKLVATKEIVKSYQGPRMVADCLT
NQTYDCDLLLIPGGLGTRTLVSDIALRQWLVEQVTRSQNVFTVCTGTALLAMTSVLNGRKATTNKMAFEWVTSLNDNPQW
QPKARWVFDGKFLTSSGVSAGTDAALFWVKHLHGEQEARRIEALTEYSWNQDASNDPYAVV

Sequences:

>Translated_221_residues
MLAAGVTAPLTQAKPTVTFSPFQAGKYRILALVFDDYETLDLHGPVEMLGHMPNAEIKLVATKEIVKSYQGPRMVADCLT
NQTYDCDLLLIPGGLGTRTLVSDIALRQWLVEQVTRSQNVFTVCTGTALLAMTSVLNGRKATTNKMAFEWVTSLNDNPQW
QPKARWVFDGKFLTSSGVSAGTDAALFWVKHLHGEQEARRIEALTEYSWNQDASNDPYAVV
>Mature_221_residues
MLAAGVTAPLTQAKPTVTFSPFQAGKYRILALVFDDYETLDLHGPVEMLGHMPNAEIKLVATKEIVKSYQGPRMVADCLT
NQTYDCDLLLIPGGLGTRTLVSDIALRQWLVEQVTRSQNVFTVCTGTALLAMTSVLNGRKATTNKMAFEWVTSLNDNPQW
QPKARWVFDGKFLTSSGVSAGTDAALFWVKHLHGEQEARRIEALTEYSWNQDASNDPYAVV

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24426; Mature: 24426

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAGVTAPLTQAKPTVTFSPFQAGKYRILALVFDDYETLDLHGPVEMLGHMPNAEIKLV
CCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCEEEECCCHHHHHCCCCCCCEEEE
ATKEIVKSYQGPRMVADCLTNQTYDCDLLLIPGGLGTRTLVSDIALRQWLVEQVTRSQNV
EHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCE
FTVCTGTALLAMTSVLNGRKATTNKMAFEWVTSLNDNPQWQPKARWVFDGKFLTSSGVSA
EEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCEEEECCCCCC
GTDAALFWVKHLHGEQEARRIEALTEYSWNQDASNDPYAVV
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEC
>Mature Secondary Structure
MLAAGVTAPLTQAKPTVTFSPFQAGKYRILALVFDDYETLDLHGPVEMLGHMPNAEIKLV
CCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCEEEECCCHHHHHCCCCCCCEEEE
ATKEIVKSYQGPRMVADCLTNQTYDCDLLLIPGGLGTRTLVSDIALRQWLVEQVTRSQNV
EHHHHHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCE
FTVCTGTALLAMTSVLNGRKATTNKMAFEWVTSLNDNPQWQPKARWVFDGKFLTSSGVSA
EEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCEEEECCCCCC
GTDAALFWVKHLHGEQEARRIEALTEYSWNQDASNDPYAVV
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA