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The map label for this gene is ydiS [C]

Identifier: 167622062

GI number: 167622062

Start: 137736

End: 139385

Strand: Reverse

Name: ydiS [C]

Synonym: Shal_0121

Alternate gene names: 167622062

Gene position: 139385-137736 (Counterclockwise)

Preceding gene: 167622081

Following gene: 167622040

Centisome position: 2.67

GC content: 51.03

Gene sequence:

>1650_bases
ATGGAACGCGAATCGATGGAATTCGATGTGGTAATCGTGGGTGCTGGCCCAGCAGGTTTGGCAACGGCATGTCGTTTAAT
GCAAATATCTCAAGACACTGGCCAAGAGCTAACAGTCTGCGTGGTCGAGAAAGGCTCTGAAGTCGGTGCACATATCTTGT
CTGGCGCAGTGTTCGAACCCAAAGTGCTCGATGAGTTATTTGACGACTGGCGCGATAAGAATGCTCCTCTACTCACCGCC
GTGACTCATGATGAAATTCATATGCTCAGCTCGGCAACCGCTGCGCGCGCCATGCCTAATGCACTTCTCCCTAAAACCAT
GCATAACGAAGGCAATTACATTATCAGTGTCGGTAACCTTTGTCGCTGGCTCGCCGAGCGCGCCGAAGAGTTAGGTGTCG
AAGTCTTCCCGGGTTTCCCTGCAAGCGAGTTACTGTTTAATCCTGATGGCAGCGTTAAAGGCATTCAAATTGGTGACATG
GGGGTCGGCGAGGATGGTCAACCTAAAGACGGCTATGAGCCGGGCATGGAACTACACGCTAAATATACCGTATTTGCTGA
AGGCTGCCGCGGCCACCTAGGCAAGCAGCTTATCGAGAAGTATCACCTCGATAACGGCAAGACTGCGCAGCACTACGGTC
TCGGCTTTAAAGAGATCTGGACGGTACCGAGCGAGCAACATGAACTCGGTAAGGTTGTGCACACCGGTGGCTGGCCGCTC
ACAGAGGGCGCCTCTGGTGGCGGCTTCATGTATCATATGGAAGACAACCAAGTTGCTGTTGGTTTGATTATCGACCTTAA
CTATAAAAACCCCCACCTAAGCCCGTTCGATGAGTTCCAGCGCTATAAGACACACCCCGTTATCGCTAAGACCCTCGCTG
GCGGCGAGCGTATCTCTTATGGTGCAAGAGCCATCACGAAAGGTGGCCTAAACTCATTGCCTAAACTGACCTTCCCGGGC
GGTATGATTATCGGCTGTGACGCTGGCACGCTGAACTTTGCCAAGATCAAAGGCACACATACGGCGATGAAGAGTGGCAT
GCTAGCGGCAGAGACACTGGCACAGGCTATGATGGCCGGTGTTGAACCGGGTAAAGATCTCGACTGCCTACAAGACCGTT
TCGATGAAAGCTGGCTCAAAGAGGAGCTATATACATCACGTAACTTCGGTCCGGCCATGCATAAGTTTGGCACCTACTTA
GGCGGCGCGTTTAACTTTATCGATCAAAACTGGTTCGGCGGTAAGTTGCCTATTACTCTAAGGGACGAGAAGCCTGATTA
TGCGCAGATGGCTGAATCCAGTGCCTACAGCAAGATTGACTACCCTAAACCTGATGGCAAACTGAGTTTCGATAAGCTCT
CTTCGGTTTATCTGTCTAATACCTTCCATGAAGAAGATCAGCTCTGTCACCTGCGCCTTAAAGACGCTCGTATCCCCATA
GAGGTGAACTTGGTGAAATATGATGAACCAGCGCTGCGCTACTGCCCTGCTGGTGTGTATGAAATTGTCGAAGAAGCGGG
TGAGAAGAAGTTTGTTATCAACGGACAAAACTGCATTCACTGCAAGACCTGTGACATCAAAGATCCAAGCCAAAACATCA
CTTGGGTCACTCCAGAGGGCGGCGGCGGACCAAACTACCCCAATATGTAG

Upstream 100 bases:

>100_bases
TGAGGTAAGGTGCACTAAAACATTAAAACACCCGTTTATAGTCCGATGGATGCAATCGGCACTATTGTCATCGGGGGAAA
TAAGAAGGAAAGGTGATCTG

Downstream 100 bases:

>100_bases
TTGCGCTTACGACTAGCCCAAGTAAAGAACCAAACAAAAATGCCTATCGAATATCATCGATAGGCATTTTATTTTTCAGA
GCACTTAAAATAGGTTAATT

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MERESMEFDVVIVGAGPAGLATACRLMQISQDTGQELTVCVVEKGSEVGAHILSGAVFEPKVLDELFDDWRDKNAPLLTA
VTHDEIHMLSSATAARAMPNALLPKTMHNEGNYIISVGNLCRWLAERAEELGVEVFPGFPASELLFNPDGSVKGIQIGDM
GVGEDGQPKDGYEPGMELHAKYTVFAEGCRGHLGKQLIEKYHLDNGKTAQHYGLGFKEIWTVPSEQHELGKVVHTGGWPL
TEGASGGGFMYHMEDNQVAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKTLAGGERISYGARAITKGGLNSLPKLTFPG
GMIIGCDAGTLNFAKIKGTHTAMKSGMLAAETLAQAMMAGVEPGKDLDCLQDRFDESWLKEELYTSRNFGPAMHKFGTYL
GGAFNFIDQNWFGGKLPITLRDEKPDYAQMAESSAYSKIDYPKPDGKLSFDKLSSVYLSNTFHEEDQLCHLRLKDARIPI
EVNLVKYDEPALRYCPAGVYEIVEEAGEKKFVINGQNCIHCKTCDIKDPSQNITWVTPEGGGGPNYPNM

Sequences:

>Translated_549_residues
MERESMEFDVVIVGAGPAGLATACRLMQISQDTGQELTVCVVEKGSEVGAHILSGAVFEPKVLDELFDDWRDKNAPLLTA
VTHDEIHMLSSATAARAMPNALLPKTMHNEGNYIISVGNLCRWLAERAEELGVEVFPGFPASELLFNPDGSVKGIQIGDM
GVGEDGQPKDGYEPGMELHAKYTVFAEGCRGHLGKQLIEKYHLDNGKTAQHYGLGFKEIWTVPSEQHELGKVVHTGGWPL
TEGASGGGFMYHMEDNQVAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKTLAGGERISYGARAITKGGLNSLPKLTFPG
GMIIGCDAGTLNFAKIKGTHTAMKSGMLAAETLAQAMMAGVEPGKDLDCLQDRFDESWLKEELYTSRNFGPAMHKFGTYL
GGAFNFIDQNWFGGKLPITLRDEKPDYAQMAESSAYSKIDYPKPDGKLSFDKLSSVYLSNTFHEEDQLCHLRLKDARIPI
EVNLVKYDEPALRYCPAGVYEIVEEAGEKKFVINGQNCIHCKTCDIKDPSQNITWVTPEGGGGPNYPNM
>Mature_549_residues
MERESMEFDVVIVGAGPAGLATACRLMQISQDTGQELTVCVVEKGSEVGAHILSGAVFEPKVLDELFDDWRDKNAPLLTA
VTHDEIHMLSSATAARAMPNALLPKTMHNEGNYIISVGNLCRWLAERAEELGVEVFPGFPASELLFNPDGSVKGIQIGDM
GVGEDGQPKDGYEPGMELHAKYTVFAEGCRGHLGKQLIEKYHLDNGKTAQHYGLGFKEIWTVPSEQHELGKVVHTGGWPL
TEGASGGGFMYHMEDNQVAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKTLAGGERISYGARAITKGGLNSLPKLTFPG
GMIIGCDAGTLNFAKIKGTHTAMKSGMLAAETLAQAMMAGVEPGKDLDCLQDRFDESWLKEELYTSRNFGPAMHKFGTYL
GGAFNFIDQNWFGGKLPITLRDEKPDYAQMAESSAYSKIDYPKPDGKLSFDKLSSVYLSNTFHEEDQLCHLRLKDARIPI
EVNLVKYDEPALRYCPAGVYEIVEEAGEKKFVINGQNCIHCKTCDIKDPSQNITWVTPEGGGGPNYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=559, Percent_Identity=50.6261180679785, Blast_Score=557, Evalue=1e-158,
Organism=Escherichia coli, GI1787991, Length=337, Percent_Identity=27.0029673590504, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1786227, Length=363, Percent_Identity=27.8236914600551, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI87082155, Length=335, Percent_Identity=25.0746268656716, Blast_Score=79, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI25144720, Length=559, Percent_Identity=50.2683363148479, Blast_Score=546, Evalue=1e-156,
Organism=Saccharomyces cerevisiae, GI6324932, Length=575, Percent_Identity=45.2173913043478, Blast_Score=467, Evalue=1e-132,
Organism=Drosophila melanogaster, GI24652256, Length=560, Percent_Identity=51.4285714285714, Blast_Score=559, Evalue=1e-159,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60221; Mature: 60221

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERESMEFDVVIVGAGPAGLATACRLMQISQDTGQELTVCVVEKGSEVGAHILSGAVFEP
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHCCCCCCH
KVLDELFDDWRDKNAPLLTAVTHDEIHMLSSATAARAMPNALLPKTMHNEGNYIISVGNL
HHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHCCHHCCCCCCEEEEHHHH
CRWLAERAEELGVEVFPGFPASELLFNPDGSVKGIQIGDMGVGEDGQPKDGYEPGMELHA
HHHHHHHHHHCCEEEECCCCHHHEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEE
KYTVFAEGCRGHLGKQLIEKYHLDNGKTAQHYGLGFKEIWTVPSEQHELGKVVHTGGWPL
EEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHCCCCCCHHHHHHEEECCCCCC
TEGASGGGFMYHMEDNQVAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKTLAGGERISY
CCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHCCCCEECC
GARAITKGGLNSLPKLTFPGGMIIGCDAGTLNFAKIKGTHTAMKSGMLAAETLAQAMMAG
CHHHHHCCCCCCCCCEECCCCEEEECCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHC
VEPGKDLDCLQDRFDESWLKEELYTSRNFGPAMHKFGTYLGGAFNFIDQNWFGGKLPITL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHCCCCCCCEEEEEE
RDEKPDYAQMAESSAYSKIDYPKPDGKLSFDKLSSVYLSNTFHEEDQLCHLRLKDARIPI
ECCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
EVNLVKYDEPALRYCPAGVYEIVEEAGEKKFVINGQNCIHCKTCDIKDPSQNITWVTPEG
EEEEEECCCCHHHHCCCHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCCEEEECCCC
GGGPNYPNM
CCCCCCCCC
>Mature Secondary Structure
MERESMEFDVVIVGAGPAGLATACRLMQISQDTGQELTVCVVEKGSEVGAHILSGAVFEP
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHCCCCCCH
KVLDELFDDWRDKNAPLLTAVTHDEIHMLSSATAARAMPNALLPKTMHNEGNYIISVGNL
HHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHCCHHCCCCCCEEEEHHHH
CRWLAERAEELGVEVFPGFPASELLFNPDGSVKGIQIGDMGVGEDGQPKDGYEPGMELHA
HHHHHHHHHHCCEEEECCCCHHHEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEE
KYTVFAEGCRGHLGKQLIEKYHLDNGKTAQHYGLGFKEIWTVPSEQHELGKVVHTGGWPL
EEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHCCCCCCHHHHHHEEECCCCCC
TEGASGGGFMYHMEDNQVAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKTLAGGERISY
CCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHCCCCEECC
GARAITKGGLNSLPKLTFPGGMIIGCDAGTLNFAKIKGTHTAMKSGMLAAETLAQAMMAG
CHHHHHCCCCCCCCCEECCCCEEEECCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHC
VEPGKDLDCLQDRFDESWLKEELYTSRNFGPAMHKFGTYLGGAFNFIDQNWFGGKLPITL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHCCCCCCCEEEEEE
RDEKPDYAQMAESSAYSKIDYPKPDGKLSFDKLSSVYLSNTFHEEDQLCHLRLKDARIPI
ECCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
EVNLVKYDEPALRYCPAGVYEIVEEAGEKKFVINGQNCIHCKTCDIKDPSQNITWVTPEG
EEEEEECCCCHHHHCCCHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCCEEEECCCC
GGGPNYPNM
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]