| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622006
Identifier: 167622006
GI number: 167622006
Start: 74528
End: 74803
Strand: Reverse
Name: 167622006
Synonym: Shal_0065
Alternate gene names: NA
Gene position: 74803-74528 (Counterclockwise)
Preceding gene: 167622007
Following gene: 167622003
Centisome position: 1.43
GC content: 49.28
Gene sequence:
>276_bases ATGAGTGAAGTTATTCACCTAGCCGACGAGAGTCGCTTCGTTATCAATGTTGACGGAGCGCAAGCCGTGCTGGCTTATGA GTTATATGAAGATCAGACTGCCGCAGACTCACCGGGTCGTCGCTGTAATTTCAACAACACCTATGTGCCACCAGAGCTGC GCGGCAGAGGCTTGGCAGAAAAACTAGTTCGTCGTGGCCTTAAATGGGCCAAGGCTGAGGGGCTAGAAATTGAAGCGAGC TGTTGGTACGTGCAAAAGTTTTTGGGTAAAAAATAA
Upstream 100 bases:
>100_bases AAAAACCTACCAGCAGGCATAAACGATTTGTGCGAGATGATTTGTACGAAAGAGTTTGCCAGCTTCGCTGCGCCCCAATG CTATAGATAGGATTGCTATT
Downstream 100 bases:
>100_bases CAGCTCACTCAAACTAAAGGCCCATGTTCAAGGGCCTCATACCAATTGCATTATTCGCCAGTCAGCAGAGCTAACTGCGC TCGAATATTGGCGCTTAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSEVIHLADESRFVINVDGAQAVLAYELYEDQTAADSPGRRCNFNNTYVPPELRGRGLAEKLVRRGLKWAKAEGLEIEAS CWYVQKFLGKK
Sequences:
>Translated_91_residues MSEVIHLADESRFVINVDGAQAVLAYELYEDQTAADSPGRRCNFNNTYVPPELRGRGLAEKLVRRGLKWAKAEGLEIEAS CWYVQKFLGKK >Mature_90_residues SEVIHLADESRFVINVDGAQAVLAYELYEDQTAADSPGRRCNFNNTYVPPELRGRGLAEKLVRRGLKWAKAEGLEIEASC WYVQKFLGKK
Specific function: Unknown
COG id: COG2388
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10289; Mature: 10158
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVIHLADESRFVINVDGAQAVLAYELYEDQTAADSPGRRCNFNNTYVPPELRGRGLAE CCCEEEECCCCEEEEEECCCCEEEEEHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHH KLVRRGLKWAKAEGLEIEASCWYVQKFLGKK HHHHCCCCCCCCCCCEECHHHHHHHHHHCCC >Mature Secondary Structure SEVIHLADESRFVINVDGAQAVLAYELYEDQTAADSPGRRCNFNNTYVPPELRGRGLAE CCEEEECCCCEEEEEECCCCEEEEEHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHH KLVRRGLKWAKAEGLEIEASCWYVQKFLGKK HHHHCCCCCCCCCCCEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA