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The map label for this gene is yuaR [C]

Identifier: 167622003

GI number: 167622003

Start: 69944

End: 71527

Strand: Reverse

Name: yuaR [C]

Synonym: Shal_0062

Alternate gene names: 167622003

Gene position: 71527-69944 (Counterclockwise)

Preceding gene: 167622006

Following gene: 167622002

Centisome position: 1.37

GC content: 51.26

Gene sequence:

>1584_bases
ATGCTTCATGGAATGTACTCACAATTACGCGCTCGGGTTTCACCAGCGTTATGGCGTAAAAAACCAGTCGCGGCGGCTAT
ATTACTCGGTGCAGGACTGATCATTCCTTCTGCTCAGGCGGACACTTCAGCTAAAACACCTCAGTCTAACTCAAGCAATC
AACACGCTTGTTATGTCGATGGTCTATCGGAGCAGATGCAGTGTGGCTCAATCTCGGTTCCTGAAAATTATGCCAAGCCA
GACGGTAAACAGATTGAGATCCACTATGTCGTAATGCCAGCCATTAAGCCCAGCGACAAAGTTGAAGCCCTACTCGCGAT
TGCTGGCGGCCCGGGGCAATCTGCCATAGAAAATGCCCAAGGCTTCGATCGCATGCTCACTAAGGTGCGTCAGACTCAGG
ACGTGATCCTTATCGATCAGCGCGGTACAGGCCAATCCAATCCGTTGCAGTGTATCGGTGACGGTTTCGACAGCGCGCTG
GCGGTTAACGAAAGTGATTTTGATACCCGGGTCGAGACTCAAAAATGCCTCGACAGCCTCGATGCAGATGTCACCCAGTA
TGGCAGCCTCAGTGCACTTAAAGATTTTGAGGCGATAAGACAGCATTTAGGTTATCAAAAGCTCCACCTTTATGGCGTAT
CTTACGGCACACGTATGGCGCAGCTTTATATGCGTCACTATCCAGAGCACCTCGCAACCGTCACCTTAGATGGTGTGGTC
CCTATGCAGCAGAGCGTGCTAGCCATTGGTAATGCTATCGCCCGCGCCTTCGATCTACTGATTGCCGACTGTGCGAATAA
CCTGCTTTGCCATAAGCAGTTTCCAGAGCTTAAAGCCGATCTAGAGAAGGTCGATGCAGAGCTAACTCAAGGCCCTAAGA
TCAGCCAAGTCCCCGACCCGCTTACCGGTGAAATGACCCAACTGACACTGACCCGCAGCAAGCTTAAGGGGGCACTACGT
ATGGCGCTTTATAACCCCAGCACTCGCTCACTCATGCCCCATGCGATTCATCAAGCCGCTAAAGGTAACTATCAACCTAT
CACAGGCCTCTATGCCATGGGCATAGACAACGCGGGTATCGCCATGGGTATGCACGCCTCTGTGGTATGCAGTGAGGACT
GGCAGCGTCTGACACCTGAGCTGCGTGCAAAAGCCAGCGAAAGCTACTTTGGTAAAGAGATGCTCAAAACCTTTGCAGAG
TCCTGCGCGGTATGGAATATGCCAGCGGTCGATACCGACTTTAGCGACCCCATTGCCAGTGATATCCCGACACTTTTACT
ATCAGGCGAGCTTGATCCTGCCACTCCACCAAGTTGGGGAACACTCGCCATGGAGAAACTCACCAACGCTAAACACTTTA
TCGCCCCTTATGCGACTCATGGGGTGGCGTATCAGTCCTGCGGGAATGATTTAATCGCAGAGCTGGTAGAGCAAGGTTCG
GTAGCCGAGCTCAATGCTGAGTGTCTGAATGAGGACATTCGCCGTAACTTCTATCTCAATGCCAGCACGGTGGAAGCGAT
TCCAAGTGACAGTACTGAGCAAAAAGATGAGCAAATAGACGAACAAACAGCCCTGATTAAGTAA

Upstream 100 bases:

>100_bases
ATTAGCACATTGACCTGAGGAAAAGTAGTTAGCCACTGCATAAAGACATTGATACAGTACCTCATATAGATACGCTAAAT
TGCAAAAAGGAATCAGTATC

Downstream 100 bases:

>100_bases
GGAAACCACCATGATACAAGTATCAAATTTATCAAAACGCATCGGAGATGTGCAGGCGCTGAACGATTTAAGCTTTTCGG
CACTCGATGGCCAGATCACG

Product: TAP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MLHGMYSQLRARVSPALWRKKPVAAAILLGAGLIIPSAQADTSAKTPQSNSSNQHACYVDGLSEQMQCGSISVPENYAKP
DGKQIEIHYVVMPAIKPSDKVEALLAIAGGPGQSAIENAQGFDRMLTKVRQTQDVILIDQRGTGQSNPLQCIGDGFDSAL
AVNESDFDTRVETQKCLDSLDADVTQYGSLSALKDFEAIRQHLGYQKLHLYGVSYGTRMAQLYMRHYPEHLATVTLDGVV
PMQQSVLAIGNAIARAFDLLIADCANNLLCHKQFPELKADLEKVDAELTQGPKISQVPDPLTGEMTQLTLTRSKLKGALR
MALYNPSTRSLMPHAIHQAAKGNYQPITGLYAMGIDNAGIAMGMHASVVCSEDWQRLTPELRAKASESYFGKEMLKTFAE
SCAVWNMPAVDTDFSDPIASDIPTLLLSGELDPATPPSWGTLAMEKLTNAKHFIAPYATHGVAYQSCGNDLIAELVEQGS
VAELNAECLNEDIRRNFYLNASTVEAIPSDSTEQKDEQIDEQTALIK

Sequences:

>Translated_527_residues
MLHGMYSQLRARVSPALWRKKPVAAAILLGAGLIIPSAQADTSAKTPQSNSSNQHACYVDGLSEQMQCGSISVPENYAKP
DGKQIEIHYVVMPAIKPSDKVEALLAIAGGPGQSAIENAQGFDRMLTKVRQTQDVILIDQRGTGQSNPLQCIGDGFDSAL
AVNESDFDTRVETQKCLDSLDADVTQYGSLSALKDFEAIRQHLGYQKLHLYGVSYGTRMAQLYMRHYPEHLATVTLDGVV
PMQQSVLAIGNAIARAFDLLIADCANNLLCHKQFPELKADLEKVDAELTQGPKISQVPDPLTGEMTQLTLTRSKLKGALR
MALYNPSTRSLMPHAIHQAAKGNYQPITGLYAMGIDNAGIAMGMHASVVCSEDWQRLTPELRAKASESYFGKEMLKTFAE
SCAVWNMPAVDTDFSDPIASDIPTLLLSGELDPATPPSWGTLAMEKLTNAKHFIAPYATHGVAYQSCGNDLIAELVEQGS
VAELNAECLNEDIRRNFYLNASTVEAIPSDSTEQKDEQIDEQTALIK
>Mature_527_residues
MLHGMYSQLRARVSPALWRKKPVAAAILLGAGLIIPSAQADTSAKTPQSNSSNQHACYVDGLSEQMQCGSISVPENYAKP
DGKQIEIHYVVMPAIKPSDKVEALLAIAGGPGQSAIENAQGFDRMLTKVRQTQDVILIDQRGTGQSNPLQCIGDGFDSAL
AVNESDFDTRVETQKCLDSLDADVTQYGSLSALKDFEAIRQHLGYQKLHLYGVSYGTRMAQLYMRHYPEHLATVTLDGVV
PMQQSVLAIGNAIARAFDLLIADCANNLLCHKQFPELKADLEKVDAELTQGPKISQVPDPLTGEMTQLTLTRSKLKGALR
MALYNPSTRSLMPHAIHQAAKGNYQPITGLYAMGIDNAGIAMGMHASVVCSEDWQRLTPELRAKASESYFGKEMLKTFAE
SCAVWNMPAVDTDFSDPIASDIPTLLLSGELDPATPPSWGTLAMEKLTNAKHFIAPYATHGVAYQSCGNDLIAELVEQGS
VAELNAECLNEDIRRNFYLNASTVEAIPSDSTEQKDEQIDEQTALIK

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 57318; Mature: 57318

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHGMYSQLRARVSPALWRKKPVAAAILLGAGLIIPSAQADTSAKTPQSNSSNQHACYVD
CCCCHHHHHHHHHCHHHHHCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCEEEEC
GLSEQMQCGSISVPENYAKPDGKQIEIHYVVMPAIKPSDKVEALLAIAGGPGQSAIENAQ
CCHHHHCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCCHHHEEEEEEECCCCHHHHHHHH
GFDRMLTKVRQTQDVILIDQRGTGQSNPLQCIGDGFDSALAVNESDFDTRVETQKCLDSL
HHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCCCCCEEEECCCCCHHHHHHHHHHHHH
DADVTQYGSLSALKDFEAIRQHLGYQKLHLYGVSYGTRMAQLYMRHYPEHLATVTLDGVV
CCCHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCC
PMQQSVLAIGNAIARAFDLLIADCANNLLCHKQFPELKADLEKVDAELTQGPKISQVPDP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
LTGEMTQLTLTRSKLKGALRMALYNPSTRSLMPHAIHQAAKGNYQPITGLYAMGIDNAGI
CCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCHHEEEECCCCCCE
AMGMHASVVCSEDWQRLTPELRAKASESYFGKEMLKTFAESCAVWNMPAVDTDFSDPIAS
EECCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
DIPTLLLSGELDPATPPSWGTLAMEKLTNAKHFIAPYATHGVAYQSCGNDLIAELVEQGS
HHHHHEECCCCCCCCCCCCHHHHHHHHCCCHHHHCHHHHCCCHHHHCCHHHHHHHHHCCC
VAELNAECLNEDIRRNFYLNASTVEAIPSDSTEQKDEQIDEQTALIK
CEECCHHHHHHHHHHCEEECCHHHHCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLHGMYSQLRARVSPALWRKKPVAAAILLGAGLIIPSAQADTSAKTPQSNSSNQHACYVD
CCCCHHHHHHHHHCHHHHHCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCEEEEC
GLSEQMQCGSISVPENYAKPDGKQIEIHYVVMPAIKPSDKVEALLAIAGGPGQSAIENAQ
CCHHHHCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCCHHHEEEEEEECCCCHHHHHHHH
GFDRMLTKVRQTQDVILIDQRGTGQSNPLQCIGDGFDSALAVNESDFDTRVETQKCLDSL
HHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCCCCCEEEECCCCCHHHHHHHHHHHHH
DADVTQYGSLSALKDFEAIRQHLGYQKLHLYGVSYGTRMAQLYMRHYPEHLATVTLDGVV
CCCHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHEEEECCCC
PMQQSVLAIGNAIARAFDLLIADCANNLLCHKQFPELKADLEKVDAELTQGPKISQVPDP
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
LTGEMTQLTLTRSKLKGALRMALYNPSTRSLMPHAIHQAAKGNYQPITGLYAMGIDNAGI
CCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCHHEEEECCCCCCE
AMGMHASVVCSEDWQRLTPELRAKASESYFGKEMLKTFAESCAVWNMPAVDTDFSDPIAS
EECCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
DIPTLLLSGELDPATPPSWGTLAMEKLTNAKHFIAPYATHGVAYQSCGNDLIAELVEQGS
HHHHHEECCCCCCCCCCCCHHHHHHHHCCCHHHHCHHHHCCCHHHHCCHHHHHHHHHCCC
VAELNAECLNEDIRRNFYLNASTVEAIPSDSTEQKDEQIDEQTALIK
CEECCHHHHHHHHHHCEEECCHHHHCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]