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The map label for this gene is glyQ

Identifier: 167621948

GI number: 167621948

Start: 9612

End: 10517

Strand: Reverse

Name: glyQ

Synonym: Shal_0007

Alternate gene names: 167621948

Gene position: 10517-9612 (Counterclockwise)

Preceding gene: 167621950

Following gene: 167621947

Centisome position: 0.2

GC content: 47.68

Gene sequence:

>906_bases
ATGACGACGAAACACGACGTAAAAACATTCCAGGGCTTCATTATGACCCTACAGGAATACTGGGCGCAGCAAGGTTGCGC
AATCGTTCAACCATTGGACATGGAAGTAGGTGCGGGTACATTCCACCCTATGACATTCTTACGCTCACTAGGCCCAGAGC
CAATGAGCAGTGCCTATGTTCAGCCTAGTCGCCGTCCTACTGATGGCCGTTATGGTGAAAACCCTAACCGTCTGCAACAC
TACTACCAGTTCCAGGTCGTACTGAAGCCATCGCCAAGCAACATGCAAGAACTCTACCTAGGCTCACTCGAAGCCTTAGG
CGTCGATATGAATGTGCATGATGTACGCTTCGTAGAAGACAACTGGGAATCACCAACTCTTGGTGCTTGGGGTCTAGGCT
GGGAAATTTGGCTAAACGGTATGGAAGTCTCTCAGTTTACTTACTTCCAGCAAGTAGGTGGTCTAGAGTGTAAACCGGTT
ACCGGTGAAATTACTTACGGCCTTGAGCGTCTAGCCATGTACATCCAAGAAGTAGACAGTGTTTACGATCTTGTATGGAC
TGACGGCCCATTGGGCAAAGTCATGTACGGTGACATCTTCCATCAAAATGAAGTTGAACAATCAACTTATAACTTTGAAC
ATGCTGATGTTGATGTTCAATTCAAGATGTTCGATGACTGCGAGCAAGCTTGCCAGCGCTTATTGGCTCTTGAAAAGCCA
CTTCCACTGCCTGCTTATGAGCAAGTAATGAAAGCCTCTCATGCATTTAACCTGCTTGATGCTCGTCACGCTATCTCTGT
TACTGAGCGCCAGCGTTATATCTTACGCGTTCGTACCATGGCTAAAGGCGTTGCCGAGGCTTACTATCAAGCCCGTGAAG
CTCTTGGCTTCCCAATGTGTAAGTAG

Upstream 100 bases:

>100_bases
TTTAACCTACCAGATAAAAAATAACCTACATAAGCCTTATTCTACAAGGTATAATCGAAACCATTTTCTATTAAGGCTTC
CAGGCAGTAGACAAGCGGAT

Downstream 100 bases:

>100_bases
AGGAATAACCAATGAATTTTGAAAACTTACTGATTGAAGTAGGCACTGAAGAGTTACCACCAAAGTCACTGCGTAAACTG
GCCGAATCTTTTCTTGCCAA

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTTKHDVKTFQGFIMTLQEYWAQQGCAIVQPLDMEVGAGTFHPMTFLRSLGPEPMSSAYVQPSRRPTDGRYGENPNRLQH
YYQFQVVLKPSPSNMQELYLGSLEALGVDMNVHDVRFVEDNWESPTLGAWGLGWEIWLNGMEVSQFTYFQQVGGLECKPV
TGEITYGLERLAMYIQEVDSVYDLVWTDGPLGKVMYGDIFHQNEVEQSTYNFEHADVDVQFKMFDDCEQACQRLLALEKP
LPLPAYEQVMKASHAFNLLDARHAISVTERQRYILRVRTMAKGVAEAYYQAREALGFPMCK

Sequences:

>Translated_301_residues
MTTKHDVKTFQGFIMTLQEYWAQQGCAIVQPLDMEVGAGTFHPMTFLRSLGPEPMSSAYVQPSRRPTDGRYGENPNRLQH
YYQFQVVLKPSPSNMQELYLGSLEALGVDMNVHDVRFVEDNWESPTLGAWGLGWEIWLNGMEVSQFTYFQQVGGLECKPV
TGEITYGLERLAMYIQEVDSVYDLVWTDGPLGKVMYGDIFHQNEVEQSTYNFEHADVDVQFKMFDDCEQACQRLLALEKP
LPLPAYEQVMKASHAFNLLDARHAISVTERQRYILRVRTMAKGVAEAYYQAREALGFPMCK
>Mature_300_residues
TTKHDVKTFQGFIMTLQEYWAQQGCAIVQPLDMEVGAGTFHPMTFLRSLGPEPMSSAYVQPSRRPTDGRYGENPNRLQHY
YQFQVVLKPSPSNMQELYLGSLEALGVDMNVHDVRFVEDNWESPTLGAWGLGWEIWLNGMEVSQFTYFQQVGGLECKPVT
GEITYGLERLAMYIQEVDSVYDLVWTDGPLGKVMYGDIFHQNEVEQSTYNFEHADVDVQFKMFDDCEQACQRLLALEKPL
PLPAYEQVMKASHAFNLLDARHAISVTERQRYILRVRTMAKGVAEAYYQAREALGFPMCK

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=298, Percent_Identity=80.8724832214765, Blast_Score=527, Evalue=1e-151,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_SHEHH (B0TLB0)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001672242.1
- ProteinModelPortal:   B0TLB0
- SMR:   B0TLB0
- GeneID:   5906174
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_0007
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- ProtClustDB:   PRK09348
- BioCyc:   SHAL458817:SHAL_0007-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 34486; Mature: 34354

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKHDVKTFQGFIMTLQEYWAQQGCAIVQPLDMEVGAGTFHPMTFLRSLGPEPMSSAYV
CCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHCCC
QPSRRPTDGRYGENPNRLQHYYQFQVVLKPSPSNMQELYLGSLEALGVDMNVHDVRFVED
CCCCCCCCCCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHCCHHHHCCCCCCCEEEEECC
NWESPTLGAWGLGWEIWLNGMEVSQFTYFQQVGGLECKPVTGEITYGLERLAMYIQEVDS
CCCCCCCCCCCCCHHHEECCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHH
VYDLVWTDGPLGKVMYGDIFHQNEVEQSTYNFEHADVDVQFKMFDDCEQACQRLLALEKP
HHHHHCCCCCCCCHHCCHHHCCCHHHHHHCCCEECCEEEEEEEHHHHHHHHHHHHHHCCC
LPLPAYEQVMKASHAFNLLDARHAISVTERQRYILRVRTMAKGVAEAYYQAREALGFPMC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
K
C
>Mature Secondary Structure 
TTKHDVKTFQGFIMTLQEYWAQQGCAIVQPLDMEVGAGTFHPMTFLRSLGPEPMSSAYV
CCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCHHCCC
QPSRRPTDGRYGENPNRLQHYYQFQVVLKPSPSNMQELYLGSLEALGVDMNVHDVRFVED
CCCCCCCCCCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHCCHHHHCCCCCCCEEEEECC
NWESPTLGAWGLGWEIWLNGMEVSQFTYFQQVGGLECKPVTGEITYGLERLAMYIQEVDS
CCCCCCCCCCCCCHHHEECCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHH
VYDLVWTDGPLGKVMYGDIFHQNEVEQSTYNFEHADVDVQFKMFDDCEQACQRLLALEKP
HHHHHCCCCCCCCHHCCHHHCCCHHHHHHCCCEECCEEEEEEEHHHHHHHHHHHHHHCCC
LPLPAYEQVMKASHAFNLLDARHAISVTERQRYILRVRTMAKGVAEAYYQAREALGFPMC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA