| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is pheT [H]
Identifier: 167040672
GI number: 167040672
Start: 2061054
End: 2063438
Strand: Reverse
Name: pheT [H]
Synonym: Teth514_2049
Alternate gene names: 167040672
Gene position: 2063438-2061054 (Counterclockwise)
Preceding gene: 167040673
Following gene: 167040671
Centisome position: 83.97
GC content: 35.72
Gene sequence:
>2385_bases ATGTTAGTATCACTTTTGTGGTTGAAAGAGTTTGTCGATATAGATGAAGATGCGAAAGCTATTGCTGAAGGCCTTACTAT GTCAGGGTCAAAGGTAGAGACTATAACAAGTTATGGGAAAGAAATTTCAAATGTGGTGGTAGGGAAAATTATTTCATTAG AAAAGCACCCTAATGCTGATAAATTGTTAGTTGGTATTGTAGATGTAGGCACTGAAAAACTACAAATTGTAACCGGAGCA CAAAATATTAAAGTGGGGGATTACATACCAGTAGCACTTCATGGCGCAACTCTTCCTGGAGGAGTTAAGATAAAAAGAGG CAAATTAAGAGGAATAGAATCCAATGGCATGATGTGTTCTGCTGAAGAGCTAGGACTTGATGAAAGCCTGCTGCCAGAAT ATCAAAGAAACGGAATTTTTATATTACCACCTTTTCCATTAGGAATGGATATAAATGAAGCTCTTCAGCTAAAAGACGAT GTATTGGAATTTGAGATAACGCCCAACAGACCTGATTGTTTGTCAATGGTAGGAATAGCGAGAGAGGTAGCTGCGACTTT TAAGAAAAAATTTAAAATGCCAGTGGTAGAAGTTAATGAAAGCGAAGAACAAAATCCTGCAAAAGTGACTATTGAGGCTA CGGATTTATGCTTTAGATATGTGGCAAGGGTCGTTAAGAATGTGAAGATAGGTCCTTCTCCTATGTGGATGCAGATGCGT CTTTTGAAAGCGGGAATAAGACCTATAAATAACGTGGTGGATGTTACAAACTATGTGATGTTGGAATTAGGTCAACCCTT ACACGCTTTTGATTTGGACAAAGTTGAAAACAAGCACATAATAGTGAGAAGGGCAAGAGAAGGAGAAAAATTAGTTACAT TGGATGGAAAAGAGAGGATTTTAGACAGCTCAATGTTGGTTATTGCTGATGAGAAGGAAGCTATAGGTTTGGCTGGCGTA ATGGGAGGAGAAAATACAGAGATAACTGATACTACTGTAAATATTTTAATAGAAAGTGCTAATTTTAAAGGAAGCAATAT AAGGCATACTTCTAAGAAATTGGGTTTAAGAAGTGAAGCTTCTTCAAGATTTGAAAAAGGTTTAGACCCAGAGATTACAG TTTTAGCTTGTGAAAGAGCAGCACAGCTTATGGAAAAATACTGTGGCGGTACAGTTTTAAAAGGGCTTGTGGACGAGTAT CCAAAGCCAATTGAAAAAACAGTTTTAACTGTAAATCCTCACAGAATTAATAGATTTTTAGGCACAGACCTTCCGACATC TCAAATGATTGAAATATTGGAGTCTTTAGAGTTTAAAGTTGTGCAAAAAGGCGATGACCTTGAAGTAACGGTACCTCACT TTAGAAGAGATGTTACAATAGAGGCAGATATTGCCGAAGAAATAGCAAGACTCTTTGGCTATAACAATATTGAAGACAGT TTAATGAAAAATGCTCAAACTACATTAGGAGCGTTGACCAAAGAGCAACGACTAGAAGAAAAAGCAAGAGAAGTTCTATT GGCTTGTGGATTAAATGAAATTGTCACTATGTCTTTTATGGGACACAAGGATTTAGACAAAATAAACGTACCTTTAGATA GCCCTCTTAGAAAAGCAGTCAAAATTATAAATCCTCTTGGGGAAGACCAAAGCCTTATGAGAACTACTCTACTGCCTTTT ATATTGAATGTAGCTTATACCAACTATAGTAGAAAAGTACAAGATTTCAAAGTTTTTGAAATATCTAAAATCTTTATGCC AAAAGAATTACCCTTAAAAGAATTACCACAGGAAATAAAGACTATTGCAATAGGAATGTACGGGAAAGATGTGGATTTTT ACTCATTAAAAGGAGTAATAGAAGCACTTTTTGAAGTAATGGGTATAAAAGGAGTAGAATATGTAAGGGCAGAAGATCCT TCATATCATCCAGGAAGGTCTGCAAAAATTCTCCTAGGTGACGAAACATTAGGTATATTTGGAGAAATACACCCTGATGT TTTAGAAAATTACGACATACCTGTTAGAGTCTACGGTGGAGAAATAAACTTAGATAAAGTAATACAATATGCTAATGTAG AAAATAGGTACATGCCTCTTCCCAAGTATCCAGCTGTAGAAAGGGATATAGCAGTTTTAGTAGATGGAGATATTTTTGTA AAAGCTGTGGAAAAAGTTATACTTGAAACAGGAGGAAAACTTATAGATAAAGTCGAATTATTTGATGTTTACAAAGGTCC TAACATCCCTGAAGGCAAAAAAAGCGTTGCTTTCTCTATCTGGTATAGGTCTTATGGAAGGACTTTGACAGATGAAGAAG TAAATGTAATTCACAACAACATTGTAGAGGCTCTTGACAAAAAATTAGGAGCCAAATTAAGATAA
Upstream 100 bases:
>100_bases AATAGATAGGATTACAATGCTGAAATACGGAATAGATGATTTAAGGTTTCTTTTTGAAAATGATTTAAGGTTTATACAAC AGTTTTAAAGGGGTGGTCGT
Downstream 100 bases:
>100_bases AAAAGGCAATTTTACAGCCTTTTTTATCTTTTATCTTAATTAAGAAGGAAATTGCACTTTAATGTAGAAGTAAATAAAAT AACAAAAGATTAAGGGGATG
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 794; Mature: 794
Protein sequence:
>794_residues MLVSLLWLKEFVDIDEDAKAIAEGLTMSGSKVETITSYGKEISNVVVGKIISLEKHPNADKLLVGIVDVGTEKLQIVTGA QNIKVGDYIPVALHGATLPGGVKIKRGKLRGIESNGMMCSAEELGLDESLLPEYQRNGIFILPPFPLGMDINEALQLKDD VLEFEITPNRPDCLSMVGIAREVAATFKKKFKMPVVEVNESEEQNPAKVTIEATDLCFRYVARVVKNVKIGPSPMWMQMR LLKAGIRPINNVVDVTNYVMLELGQPLHAFDLDKVENKHIIVRRAREGEKLVTLDGKERILDSSMLVIADEKEAIGLAGV MGGENTEITDTTVNILIESANFKGSNIRHTSKKLGLRSEASSRFEKGLDPEITVLACERAAQLMEKYCGGTVLKGLVDEY PKPIEKTVLTVNPHRINRFLGTDLPTSQMIEILESLEFKVVQKGDDLEVTVPHFRRDVTIEADIAEEIARLFGYNNIEDS LMKNAQTTLGALTKEQRLEEKAREVLLACGLNEIVTMSFMGHKDLDKINVPLDSPLRKAVKIINPLGEDQSLMRTTLLPF ILNVAYTNYSRKVQDFKVFEISKIFMPKELPLKELPQEIKTIAIGMYGKDVDFYSLKGVIEALFEVMGIKGVEYVRAEDP SYHPGRSAKILLGDETLGIFGEIHPDVLENYDIPVRVYGGEINLDKVIQYANVENRYMPLPKYPAVERDIAVLVDGDIFV KAVEKVILETGGKLIDKVELFDVYKGPNIPEGKKSVAFSIWYRSYGRTLTDEEVNVIHNNIVEALDKKLGAKLR
Sequences:
>Translated_794_residues MLVSLLWLKEFVDIDEDAKAIAEGLTMSGSKVETITSYGKEISNVVVGKIISLEKHPNADKLLVGIVDVGTEKLQIVTGA QNIKVGDYIPVALHGATLPGGVKIKRGKLRGIESNGMMCSAEELGLDESLLPEYQRNGIFILPPFPLGMDINEALQLKDD VLEFEITPNRPDCLSMVGIAREVAATFKKKFKMPVVEVNESEEQNPAKVTIEATDLCFRYVARVVKNVKIGPSPMWMQMR LLKAGIRPINNVVDVTNYVMLELGQPLHAFDLDKVENKHIIVRRAREGEKLVTLDGKERILDSSMLVIADEKEAIGLAGV MGGENTEITDTTVNILIESANFKGSNIRHTSKKLGLRSEASSRFEKGLDPEITVLACERAAQLMEKYCGGTVLKGLVDEY PKPIEKTVLTVNPHRINRFLGTDLPTSQMIEILESLEFKVVQKGDDLEVTVPHFRRDVTIEADIAEEIARLFGYNNIEDS LMKNAQTTLGALTKEQRLEEKAREVLLACGLNEIVTMSFMGHKDLDKINVPLDSPLRKAVKIINPLGEDQSLMRTTLLPF ILNVAYTNYSRKVQDFKVFEISKIFMPKELPLKELPQEIKTIAIGMYGKDVDFYSLKGVIEALFEVMGIKGVEYVRAEDP SYHPGRSAKILLGDETLGIFGEIHPDVLENYDIPVRVYGGEINLDKVIQYANVENRYMPLPKYPAVERDIAVLVDGDIFV KAVEKVILETGGKLIDKVELFDVYKGPNIPEGKKSVAFSIWYRSYGRTLTDEEVNVIHNNIVEALDKKLGAKLR >Mature_794_residues MLVSLLWLKEFVDIDEDAKAIAEGLTMSGSKVETITSYGKEISNVVVGKIISLEKHPNADKLLVGIVDVGTEKLQIVTGA QNIKVGDYIPVALHGATLPGGVKIKRGKLRGIESNGMMCSAEELGLDESLLPEYQRNGIFILPPFPLGMDINEALQLKDD VLEFEITPNRPDCLSMVGIAREVAATFKKKFKMPVVEVNESEEQNPAKVTIEATDLCFRYVARVVKNVKIGPSPMWMQMR LLKAGIRPINNVVDVTNYVMLELGQPLHAFDLDKVENKHIIVRRAREGEKLVTLDGKERILDSSMLVIADEKEAIGLAGV MGGENTEITDTTVNILIESANFKGSNIRHTSKKLGLRSEASSRFEKGLDPEITVLACERAAQLMEKYCGGTVLKGLVDEY PKPIEKTVLTVNPHRINRFLGTDLPTSQMIEILESLEFKVVQKGDDLEVTVPHFRRDVTIEADIAEEIARLFGYNNIEDS LMKNAQTTLGALTKEQRLEEKAREVLLACGLNEIVTMSFMGHKDLDKINVPLDSPLRKAVKIINPLGEDQSLMRTTLLPF ILNVAYTNYSRKVQDFKVFEISKIFMPKELPLKELPQEIKTIAIGMYGKDVDFYSLKGVIEALFEVMGIKGVEYVRAEDP SYHPGRSAKILLGDETLGIFGEIHPDVLENYDIPVRVYGGEINLDKVIQYANVENRYMPLPKYPAVERDIAVLVDGDIFV KAVEKVILETGGKLIDKVELFDVYKGPNIPEGKKSVAFSIWYRSYGRTLTDEEVNVIHNNIVEALDKKLGAKLR
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI124028525, Length=279, Percent_Identity=29.0322580645161, Blast_Score=101, Evalue=3e-21, Organism=Escherichia coli, GI1788006, Length=810, Percent_Identity=35.4320987654321, Blast_Score=461, Evalue=1e-131, Organism=Caenorhabditis elegans, GI17533403, Length=563, Percent_Identity=21.4920071047957, Blast_Score=86, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6323089, Length=595, Percent_Identity=22.3529411764706, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI21355211, Length=566, Percent_Identity=24.0282685512367, Blast_Score=115, Evalue=1e-25,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 88525; Mature: 88525
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSLLWLKEFVDIDEDAKAIAEGLTMSGSKVETITSYGKEISNVVVGKIISLEKHPNAD CEEHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCC KLLVGIVDVGTEKLQIVTGAQNIKVGDYIPVALHGATLPGGVKIKRGKLRGIESNGMMCS CEEEEEEECCCCEEEEEECCCCEEECCEEEEEEECCCCCCCEEEECCCCCCCCCCCCEEE AEELGLDESLLPEYQRNGIFILPPFPLGMDINEALQLKDDVLEFEITPNRPDCLSMVGIA HHHCCCCHHHCCHHHCCCEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHH REVAATFKKKFKMPVVEVNESEEQNPAKVTIEATDLCFRYVARVVKNVKIGPSPMWMQMR HHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHH LLKAGIRPINNVVDVTNYVMLELGQPLHAFDLDKVENKHIIVRRAREGEKLVTLDGKERI HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCHHHH LDSSMLVIADEKEAIGLAGVMGGENTEITDTTVNILIESANFKGSNIRHTSKKLGLRSEA HCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHCCCCHHH SSRFEKGLDPEITVLACERAAQLMEKYCGGTVLKGLVDEYPKPIEKTVLTVNPHRINRFL HHHHHCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHCEEEECHHHHHHHH GTDLPTSQMIEILESLEFKVVQKGDDLEVTVPHFRRDVTIEADIAEEIARLFGYNNIEDS CCCCCHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCEEEEHHHHHHHHHHHCCCCHHHH LMKNAQTTLGALTKEQRLEEKAREVLLACGLNEIVTMSFMGHKDLDKINVPLDSPLRKAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCCCCCHHHHHHH KIINPLGEDQSLMRTTLLPFILNVAYTNYSRKVQDFKVFEISKIFMPKELPLKELPQEIK HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEHHHCCCCCCCHHHHHHHHH TIAIGMYGKDVDFYSLKGVIEALFEVMGIKGVEYVRAEDPSYHPGRSAKILLGDETLGIF HEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEECCCCEECC GEIHPDVLENYDIPVRVYGGEINLDKVIQYANVENRYMPLPKYPAVERDIAVLVDGDIFV CCCCHHHHHCCCCEEEEECCEECHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHH KAVEKVILETGGKLIDKVELFDVYKGPNIPEGKKSVAFSIWYRSYGRTLTDEEVNVIHNN HHHHHHHHHCCCHHHHHHHEEEHHCCCCCCCCCHHEEEEEEEHHHCCCCCCCHHHHHHHH IVEALDKKLGAKLR HHHHHHHHHCCCCC >Mature Secondary Structure MLVSLLWLKEFVDIDEDAKAIAEGLTMSGSKVETITSYGKEISNVVVGKIISLEKHPNAD CEEHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCC KLLVGIVDVGTEKLQIVTGAQNIKVGDYIPVALHGATLPGGVKIKRGKLRGIESNGMMCS CEEEEEEECCCCEEEEEECCCCEEECCEEEEEEECCCCCCCEEEECCCCCCCCCCCCEEE AEELGLDESLLPEYQRNGIFILPPFPLGMDINEALQLKDDVLEFEITPNRPDCLSMVGIA HHHCCCCHHHCCHHHCCCEEEECCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHH REVAATFKKKFKMPVVEVNESEEQNPAKVTIEATDLCFRYVARVVKNVKIGPSPMWMQMR HHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHH LLKAGIRPINNVVDVTNYVMLELGQPLHAFDLDKVENKHIIVRRAREGEKLVTLDGKERI HHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCHHHH LDSSMLVIADEKEAIGLAGVMGGENTEITDTTVNILIESANFKGSNIRHTSKKLGLRSEA HCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHCCCCHHH SSRFEKGLDPEITVLACERAAQLMEKYCGGTVLKGLVDEYPKPIEKTVLTVNPHRINRFL HHHHHCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHCEEEECHHHHHHHH GTDLPTSQMIEILESLEFKVVQKGDDLEVTVPHFRRDVTIEADIAEEIARLFGYNNIEDS CCCCCHHHHHHHHHHCCEEEEECCCCCEEECCCCCCCEEEEHHHHHHHHHHHCCCCHHHH LMKNAQTTLGALTKEQRLEEKAREVLLACGLNEIVTMSFMGHKDLDKINVPLDSPLRKAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCCCCCCCCHHHHHHH KIINPLGEDQSLMRTTLLPFILNVAYTNYSRKVQDFKVFEISKIFMPKELPLKELPQEIK HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEHHHCCCCCCCHHHHHHHHH TIAIGMYGKDVDFYSLKGVIEALFEVMGIKGVEYVRAEDPSYHPGRSAKILLGDETLGIF HEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEECCCCEECC GEIHPDVLENYDIPVRVYGGEINLDKVIQYANVENRYMPLPKYPAVERDIAVLVDGDIFV CCCCHHHHHCCCCEEEEECCEECHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCHHHH KAVEKVILETGGKLIDKVELFDVYKGPNIPEGKKSVAFSIWYRSYGRTLTDEEVNVIHNN HHHHHHHHHCCCHHHHHHHEEEHHCCCCCCCCCHHEEEEEEEHHHCCCCCCCHHHHHHHH IVEALDKKLGAKLR HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]