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The map label for this gene is ymfF [H]

Identifier: 167040643

GI number: 167040643

Start: 2029867

End: 2031132

Strand: Reverse

Name: ymfF [H]

Synonym: Teth514_2020

Alternate gene names: 167040643

Gene position: 2031132-2029867 (Counterclockwise)

Preceding gene: 167040644

Following gene: 167040642

Centisome position: 82.66

GC content: 31.67

Gene sequence:

>1266_bases
ATGGAATTAATTAGGAAACAATTAAACAACGGAATAAATTTATACATAGATACTACAGACAAATTTAAAACAGTGACAAT
TAATCTTTATATCCACAATCAATTAGGAGAAGAGGCTACAAAATACGCTTTGCTGCCTGCTGTTTTAAAAAGGGGTACTT
TTAGTATTAAAACTTACAAAGAAATGGTGAAGTTTTTGGAAAACTTGTATGGCACTACTATGGCTGTTTCTGTGTATAAA
AAAGGAGAAAGGCACCTTCAACAATATAGATTGGAATTACCTCAAGAAGAGTACATACAAGAGAATATTTTAGAAGAGGG
AGTAAAATTTTTAAAAGAGTTAGTTTTCAACCCTCTTACAGAAGGAAATGCTTTTAATAAAGATTATGTACTTCAAGAAA
AAGAGATTCACAAAAATTTAATAGATTCAAGAATAAACGATAAAACCAAATATGCAGTAGACCGTTGTTATGAAGAGATG
TGTAAAGGTGAACCTTTTGCTATTTTTGAATTGGGTAGAAGTGAGGATTTAAACTCCATTGATGAAGTCAACCTTTACCA
GTATTATCAAAATTGTATTAATACTTTGCCAATGGATATATATGTTGTAGGAAATGTGGACCCTAGATATGTAGAAGAGG
TTTTTACAAAATATTTTTCTTTTCAAAGAGGACAGATACTAAATATTCCTTCCCCCAATATATATAAAGAGGTAAAGGAA
GTAAAGTATGTGACAGAAAATTTAGAAGTAACACAGGGGAAGCTTACTCTTGGCTTTAGAACTAATGTACCGGCTAACAG
TGAGGAATATTTTCCTCTTTTGGTATACAGTGGTGTGTTAGGAGGAGGACCTTTTTCTAAACTTTTTATGAATGTGAGGG
AAAAGGCAAGCCTTGCTTATTATGCTTATTCAAGGCTAGAGAGATTTAGAGGTTTAATGGTGGTGAGTTGCGGCATAGAG
ATAGAAAATTACAACAAAGCTCTTGACATAATACTTAAACAGTTAAAAGAAATTGAAGAAGGTAATATCTCAGATTATGA
ATTAGATTCCACAATAAAAGCCTTAAAGACCTCTTTGAATGCAATGAAAGACAATGCTACTTCTAAATCTGACTACTATT
TGTCACAAAAAATTGCAGGAGTAGATTTAAATATAGAAGAATTTATTAAAAAAGTAGAAAAGGTGACAAAAGAGGACGTA
GTGGAAGTTGCTAAAAAGGTTAAATTAGATACGGTGTATTTTATGACCGGCAAAAAGGAGGAATAA

Upstream 100 bases:

>100_bases
AAACCTGGGGTTTTTCCCCGGGTTTATGTATTATTGACTTTGTGTTACAATTATCATATAATCAAAAAATAATTGGATTA
TTTTAGAAGGAGTTGATGAC

Downstream 100 bases:

>100_bases
TTATGCAGCAGTTGTACAATGAGAGAATAGACGAAAAAATGCTTTTACAAGAATTGGATAATGGCCTAAAAGTGTATATA
ATGCCGAAAAGAGGTTATAC

Product: peptidase M16 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MELIRKQLNNGINLYIDTTDKFKTVTINLYIHNQLGEEATKYALLPAVLKRGTFSIKTYKEMVKFLENLYGTTMAVSVYK
KGERHLQQYRLELPQEEYIQENILEEGVKFLKELVFNPLTEGNAFNKDYVLQEKEIHKNLIDSRINDKTKYAVDRCYEEM
CKGEPFAIFELGRSEDLNSIDEVNLYQYYQNCINTLPMDIYVVGNVDPRYVEEVFTKYFSFQRGQILNIPSPNIYKEVKE
VKYVTENLEVTQGKLTLGFRTNVPANSEEYFPLLVYSGVLGGGPFSKLFMNVREKASLAYYAYSRLERFRGLMVVSCGIE
IENYNKALDIILKQLKEIEEGNISDYELDSTIKALKTSLNAMKDNATSKSDYYLSQKIAGVDLNIEEFIKKVEKVTKEDV
VEVAKKVKLDTVYFMTGKKEE

Sequences:

>Translated_421_residues
MELIRKQLNNGINLYIDTTDKFKTVTINLYIHNQLGEEATKYALLPAVLKRGTFSIKTYKEMVKFLENLYGTTMAVSVYK
KGERHLQQYRLELPQEEYIQENILEEGVKFLKELVFNPLTEGNAFNKDYVLQEKEIHKNLIDSRINDKTKYAVDRCYEEM
CKGEPFAIFELGRSEDLNSIDEVNLYQYYQNCINTLPMDIYVVGNVDPRYVEEVFTKYFSFQRGQILNIPSPNIYKEVKE
VKYVTENLEVTQGKLTLGFRTNVPANSEEYFPLLVYSGVLGGGPFSKLFMNVREKASLAYYAYSRLERFRGLMVVSCGIE
IENYNKALDIILKQLKEIEEGNISDYELDSTIKALKTSLNAMKDNATSKSDYYLSQKIAGVDLNIEEFIKKVEKVTKEDV
VEVAKKVKLDTVYFMTGKKEE
>Mature_421_residues
MELIRKQLNNGINLYIDTTDKFKTVTINLYIHNQLGEEATKYALLPAVLKRGTFSIKTYKEMVKFLENLYGTTMAVSVYK
KGERHLQQYRLELPQEEYIQENILEEGVKFLKELVFNPLTEGNAFNKDYVLQEKEIHKNLIDSRINDKTKYAVDRCYEEM
CKGEPFAIFELGRSEDLNSIDEVNLYQYYQNCINTLPMDIYVVGNVDPRYVEEVFTKYFSFQRGQILNIPSPNIYKEVKE
VKYVTENLEVTQGKLTLGFRTNVPANSEEYFPLLVYSGVLGGGPFSKLFMNVREKASLAYYAYSRLERFRGLMVVSCGIE
IENYNKALDIILKQLKEIEEGNISDYELDSTIKALKTSLNAMKDNATSKSDYYLSQKIAGVDLNIEEFIKKVEKVTKEDV
VEVAKKVKLDTVYFMTGKKEE

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 48777; Mature: 48777

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIRKQLNNGINLYIDTTDKFKTVTINLYIHNQLGEEATKYALLPAVLKRGTFSIKTYK
CHHHHHHHCCCCEEEEECCCCEEEEEEEEEEECHHCHHHHHHHHHHHHHHCCCCCHHHHH
EMVKFLENLYGTTMAVSVYKKGERHLQQYRLELPQEEYIQENILEEGVKFLKELVFNPLT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
EGNAFNKDYVLQEKEIHKNLIDSRINDKTKYAVDRCYEEMCKGEPFAIFELGRSEDLNSI
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCH
DEVNLYQYYQNCINTLPMDIYVVGNVDPRYVEEVFTKYFSFQRGQILNIPSPNIYKEVKE
HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHH
VKYVTENLEVTQGKLTLGFRTNVPANSEEYFPLLVYSGVLGGGPFSKLFMNVREKASLAY
HHHHHHCCEEECCEEEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
YAYSRLERFRGLMVVSCGIEIENYNKALDIILKQLKEIEEGNISDYELDSTIKALKTSLN
HHHHHHHHHCCEEEEEECEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AMKDNATSKSDYYLSQKIAGVDLNIEEFIKKVEKVTKEDVVEVAKKVKLDTVYFMTGKKE
HHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCC
E
C
>Mature Secondary Structure
MELIRKQLNNGINLYIDTTDKFKTVTINLYIHNQLGEEATKYALLPAVLKRGTFSIKTYK
CHHHHHHHCCCCEEEEECCCCEEEEEEEEEEECHHCHHHHHHHHHHHHHHCCCCCHHHHH
EMVKFLENLYGTTMAVSVYKKGERHLQQYRLELPQEEYIQENILEEGVKFLKELVFNPLT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
EGNAFNKDYVLQEKEIHKNLIDSRINDKTKYAVDRCYEEMCKGEPFAIFELGRSEDLNSI
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCH
DEVNLYQYYQNCINTLPMDIYVVGNVDPRYVEEVFTKYFSFQRGQILNIPSPNIYKEVKE
HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHH
VKYVTENLEVTQGKLTLGFRTNVPANSEEYFPLLVYSGVLGGGPFSKLFMNVREKASLAY
HHHHHHCCEEECCEEEEEEECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
YAYSRLERFRGLMVVSCGIEIENYNKALDIILKQLKEIEEGNISDYELDSTIKALKTSLN
HHHHHHHHHCCEEEEEECEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
AMKDNATSKSDYYLSQKIAGVDLNIEEFIKKVEKVTKEDVVEVAKKVKLDTVYFMTGKKE
HHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]