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The map label for this gene is nrdR [H]

Identifier: 167040621

GI number: 167040621

Start: 2008095

End: 2008571

Strand: Reverse

Name: nrdR [H]

Synonym: Teth514_1998

Alternate gene names: 167040621

Gene position: 2008571-2008095 (Counterclockwise)

Preceding gene: 167040622

Following gene: 167040620

Centisome position: 81.74

GC content: 32.08

Gene sequence:

>477_bases
ATGAAATGCCCTTATTGTGGGTATCCAGATTCAAAAGTTATTGATTCTCGACCTACAGATGATAACACTTCTATAAGGAG
AAGAAGGGAATGTTTAAAATGTGGGAAGAGATTTACTACTTATGAGAAAGTAGAACAATTGCCTATACTTGTAATAAAAA
AAGACAATCGCCGAGAAGTCTATGACAGAGATAAAATATTAAAAGGCATGATAAAAGCTTGCGAAAAAAGGCCAGTGCCT
ATAAAGGTGTTAGAAGAAATTACAGATGAAATTGACAAAAGAATAATAAATTCAATGGAAAGGGAAATAACCTCCACCGA
AATCGGAGAAATGGTAATGGAAAAACTTAAAAATGTAGATGAAGTAGCTTATGTTAGGTTTGCCTCTGTTTATAGGCAGT
TTAAAGATATAAATACTTTTATGGACGAACTTAAGAAACTTCTTAAAGAGAGTGAGACAAAAAAAGAAAATGCATAA

Upstream 100 bases:

>100_bases
ATATTAGTAGATTTTAAAGATAGAGAAGCTTAAGTTTGACTAATGAAAACAAGTTTATTATAATTTTATTAAACAATTAA
GAATTGTTGGAGGTAATAAG

Downstream 100 bases:

>100_bases
CTTTTTGCTTCAAAGGTGTACAAGCCATATTATCTGGAGGTGTCAAAATGGCCCATACGGTTTTGGTTATAGAAGATGAA
ATTCATATATTGGAACTTTT

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKCPYCGYPDSKVIDSRPTDDNTSIRRRRECLKCGKRFTTYEKVEQLPILVIKKDNRREVYDRDKILKGMIKACEKRPVP
IKVLEEITDEIDKRIINSMEREITSTEIGEMVMEKLKNVDEVAYVRFASVYRQFKDINTFMDELKKLLKESETKKENA

Sequences:

>Translated_158_residues
MKCPYCGYPDSKVIDSRPTDDNTSIRRRRECLKCGKRFTTYEKVEQLPILVIKKDNRREVYDRDKILKGMIKACEKRPVP
IKVLEEITDEIDKRIINSMEREITSTEIGEMVMEKLKNVDEVAYVRFASVYRQFKDINTFMDELKKLLKESETKKENA
>Mature_158_residues
MKCPYCGYPDSKVIDSRPTDDNTSIRRRRECLKCGKRFTTYEKVEQLPILVIKKDNRREVYDRDKILKGMIKACEKRPVP
IKVLEEITDEIDKRIINSMEREITSTEIGEMVMEKLKNVDEVAYVRFASVYRQFKDINTFMDELKKLLKESETKKENA

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=147, Percent_Identity=46.2585034013605, Blast_Score=140, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 18721; Mature: 18721

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCPYCGYPDSKVIDSRPTDDNTSIRRRRECLKCGKRFTTYEKVEQLPILVIKKDNRREV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCEEEEECCCCHHH
YDRDKILKGMIKACEKRPVPIKVLEEITDEIDKRIINSMEREITSTEIGEMVMEKLKNVD
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
EVAYVRFASVYRQFKDINTFMDELKKLLKESETKKENA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKCPYCGYPDSKVIDSRPTDDNTSIRRRRECLKCGKRFTTYEKVEQLPILVIKKDNRREV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCEEEEECCCCHHH
YDRDKILKGMIKACEKRPVPIKVLEEITDEIDKRIINSMEREITSTEIGEMVMEKLKNVD
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
EVAYVRFASVYRQFKDINTFMDELKKLLKESETKKENA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA