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The map label for this gene is rpiB [H]

Identifier: 167040551

GI number: 167040551

Start: 1933617

End: 1934078

Strand: Reverse

Name: rpiB [H]

Synonym: Teth514_1922

Alternate gene names: 167040551

Gene position: 1934078-1933617 (Counterclockwise)

Preceding gene: 167040552

Following gene: 167040550

Centisome position: 78.71

GC content: 37.45

Gene sequence:

>462_bases
ATGATGAAGATAATTTTGGGTAGTGATCATTTTGGTTTTGATTTAAAAGAAGTTATTAAAGAACATCTACAGTCTAAAGG
AATTGCAGTAGTTGACATAGGGGTTTATGATAAAAATCCAGTGGATTATCCCGATATTGCTGTAGCACTTGCCGAAAGAG
TTGCATCGGGAGAATTTGAAAGAGGAATTCTTATTTGTGGCACAGGGATAGGGATGGCTATTGTTGCCAATAAAGTGCCT
GGAGTAAGAGCTGCAGTATGCCATGATGTGTATTCTGCAGAAAGAGCACGTAAAAGTAATGATGCACAAATTATGACTAT
GGGTGGAGTCATAGTAGGACCAGAACTAGCTAAAAAACTTGTAGATGTGTGGCTTGAGTCAGAATTTCAAGGAGGACGTT
CTTTACCAAAAGTGGAGAAAATTAAAATGATAGATGCAAAATATCGCGGTATGGCTAAATAA

Upstream 100 bases:

>100_bases
TCAGAAGATATGTTGAAAAAAGGGTTTGGGCTAGATGGTGAGACAATAGCTATAAGTATAGAGAATTTTCTTAAAAATAG
AACTAAGTGAGGAGGAAAAA

Downstream 100 bases:

>100_bases
ATAAAAGAGCGGTTTACTTTGAATGTTAAAGCAGTTATTTTCGATTTAGATGTAACGCTAATAGATTCAAAAAAAGATAT
TGTTATAGCTGCAAATAAGG

Product: RpiB/LacA/LacB family sugar-phosphate isomerase

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MMKIILGSDHFGFDLKEVIKEHLQSKGIAVVDIGVYDKNPVDYPDIAVALAERVASGEFERGILICGTGIGMAIVANKVP
GVRAAVCHDVYSAERARKSNDAQIMTMGGVIVGPELAKKLVDVWLESEFQGGRSLPKVEKIKMIDAKYRGMAK

Sequences:

>Translated_153_residues
MMKIILGSDHFGFDLKEVIKEHLQSKGIAVVDIGVYDKNPVDYPDIAVALAERVASGEFERGILICGTGIGMAIVANKVP
GVRAAVCHDVYSAERARKSNDAQIMTMGGVIVGPELAKKLVDVWLESEFQGGRSLPKVEKIKMIDAKYRGMAK
>Mature_153_residues
MMKIILGSDHFGFDLKEVIKEHLQSKGIAVVDIGVYDKNPVDYPDIAVALAERVASGEFERGILICGTGIGMAIVANKVP
GVRAAVCHDVYSAERARKSNDAQIMTMGGVIVGPELAKKLVDVWLESEFQGGRSLPKVEKIKMIDAKYRGMAK

Specific function: In addition to its activity on D-ribose 5-phosphate it probably also has activity on D-allose 6-phosphate [H]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=147, Percent_Identity=46.2585034013605, Blast_Score=142, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 16603; Mature: 16603

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKIILGSDHFGFDLKEVIKEHLQSKGIAVVDIGVYDKNPVDYPDIAVALAERVASGEFE
CEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
RGILICGTGIGMAIVANKVPGVRAAVCHDVYSAERARKSNDAQIMTMGGVIVGPELAKKL
CCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECHHHHHHH
VDVWLESEFQGGRSLPKVEKIKMIDAKYRGMAK
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMKIILGSDHFGFDLKEVIKEHLQSKGIAVVDIGVYDKNPVDYPDIAVALAERVASGEFE
CEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
RGILICGTGIGMAIVANKVPGVRAAVCHDVYSAERARKSNDAQIMTMGGVIVGPELAKKL
CCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECHHHHHHH
VDVWLESEFQGGRSLPKVEKIKMIDAKYRGMAK
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8576032; 7610040; 9278503; 1840580; 7984428; 9401019 [H]