Click here to switch to the map view.

The map label for this gene is secF [H]

Identifier: 167040103

GI number: 167040103

Start: 1495402

End: 1496313

Strand: Direct

Name: secF [H]

Synonym: Teth514_1463

Alternate gene names: 167040103

Gene position: 1495402-1496313 (Clockwise)

Preceding gene: 167040102

Following gene: 167040104

Centisome position: 60.86

GC content: 31.69

Gene sequence:

>912_bases
GTGAATCAACACAGATTTCATATAGACGTCATTGGTAAAACTAAGATTTGGTTTGCGATATCAGGAATTGTAATCTTAAT
TGGTGTAATAGCAATGTTTGTAAATGGATTTAATTGGGGTATAGATTTTACTGGTGGAACAATAATGGAATTCCAAATTG
GCAAATCTTTTGATACTGCTGACATCATAAAAATATTAAACAATTATAAAGTCAAAGACTTTCAAGTGCAGAAAATAGGC
ACAAAGGGAGATACTGTTTCAATAAAGACAAGCCCAATATCTAATGAAACTCGACTTTCTATAATAAAAGATATAGAGTC
AAAATATAATTTAACGGAAAACGATCTGATAATGTCACAACAAGTAGGACCTTCTTTAGGCGCAGAAATAAAATTTGGAA
TGATACGTGCTCTATTGCTGGCTTCTGCTGTAATGTTTATCTATTTAGGATTTAGGTTTGAATTTGAAATGAGTGGGGCT
GCAGTTATTGCTTTACTCCACGATGTGATTATATTAATTTCTATATATGCTATTTTTCACATAACAGTTAACGCTCCTTT
TATAGCAGCAGTTTTAACTGTATTTGGCTATTCTGTGAATGCTACTGTCGTAATTTTTGACAGAATAAGGGATAACTTAA
AAATCATGAGAAGATCGGATTATGCAAAAATTGCAAATGTTAGTGTAAATCAGACTCTTACAAGGTCAATAAATACAACT
TTGACTACGTTGATTATCCTTGTTTTAATGTATTTCTTAGGACCCAAGGCATTGAAAGATTTCGCATTGCCTTTGCTTAT
TGGGATAATTTCGGGAACATATTCTTCGATATTTATCTCTACTCCTCTTTGGGTATTAATTAAGAATAGAGAAAAGAGAA
GAAAAACCTCTAATAAACCTATAAAAGCCTAA

Upstream 100 bases:

>100_bases
GTTTACAGCTATAACTGTAACGAGATTTTTGTTGCTTGCACTTGTCGATTTGGATTTGACAAGAAATATAAAATTTTACG
GAGCGTAGGAGGGAAATTGA

Downstream 100 bases:

>100_bases
GTTTTAAATAAATACAAAAAATCTAGTGGCATAATATCTCTTTTTAGAGATAATGCTACTAGATTTTTATTGAGGTGAAA
AAATGAATTTGCCTTTTATT

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MNQHRFHIDVIGKTKIWFAISGIVILIGVIAMFVNGFNWGIDFTGGTIMEFQIGKSFDTADIIKILNNYKVKDFQVQKIG
TKGDTVSIKTSPISNETRLSIIKDIESKYNLTENDLIMSQQVGPSLGAEIKFGMIRALLLASAVMFIYLGFRFEFEMSGA
AVIALLHDVIILISIYAIFHITVNAPFIAAVLTVFGYSVNATVVIFDRIRDNLKIMRRSDYAKIANVSVNQTLTRSINTT
LTTLIILVLMYFLGPKALKDFALPLLIGIISGTYSSIFISTPLWVLIKNREKRRKTSNKPIKA

Sequences:

>Translated_303_residues
MNQHRFHIDVIGKTKIWFAISGIVILIGVIAMFVNGFNWGIDFTGGTIMEFQIGKSFDTADIIKILNNYKVKDFQVQKIG
TKGDTVSIKTSPISNETRLSIIKDIESKYNLTENDLIMSQQVGPSLGAEIKFGMIRALLLASAVMFIYLGFRFEFEMSGA
AVIALLHDVIILISIYAIFHITVNAPFIAAVLTVFGYSVNATVVIFDRIRDNLKIMRRSDYAKIANVSVNQTLTRSINTT
LTTLIILVLMYFLGPKALKDFALPLLIGIISGTYSSIFISTPLWVLIKNREKRRKTSNKPIKA
>Mature_303_residues
MNQHRFHIDVIGKTKIWFAISGIVILIGVIAMFVNGFNWGIDFTGGTIMEFQIGKSFDTADIIKILNNYKVKDFQVQKIG
TKGDTVSIKTSPISNETRLSIIKDIESKYNLTENDLIMSQQVGPSLGAEIKFGMIRALLLASAVMFIYLGFRFEFEMSGA
AVIALLHDVIILISIYAIFHITVNAPFIAAVLTVFGYSVNATVVIFDRIRDNLKIMRRSDYAKIANVSVNQTLTRSINTT
LTTLIILVLMYFLGPKALKDFALPLLIGIISGTYSSIFISTPLWVLIKNREKRRKTSNKPIKA

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=272, Percent_Identity=36.0294117647059, Blast_Score=180, Evalue=8e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 33853; Mature: 33853

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQHRFHIDVIGKTKIWFAISGIVILIGVIAMFVNGFNWGIDFTGGTIMEFQIGKSFDTA
CCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEECCCCCHH
DIIKILNNYKVKDFQVQKIGTKGDTVSIKTSPISNETRLSIIKDIESKYNLTENDLIMSQ
HHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHEEEHH
QVGPSLGAEIKFGMIRALLLASAVMFIYLGFRFEFEMSGAAVIALLHDVIILISIYAIFH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
ITVNAPFIAAVLTVFGYSVNATVVIFDRIRDNLKIMRRSDYAKIANVSVNQTLTRSINTT
EEECCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHH
LTTLIILVLMYFLGPKALKDFALPLLIGIISGTYSSIFISTPLWVLIKNREKRRKTSNKP
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHEEEECCCEEEEEECCHHHHHCCCCC
IKA
CCC
>Mature Secondary Structure
MNQHRFHIDVIGKTKIWFAISGIVILIGVIAMFVNGFNWGIDFTGGTIMEFQIGKSFDTA
CCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEECCCCCHH
DIIKILNNYKVKDFQVQKIGTKGDTVSIKTSPISNETRLSIIKDIESKYNLTENDLIMSQ
HHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHEEEHH
QVGPSLGAEIKFGMIRALLLASAVMFIYLGFRFEFEMSGAAVIALLHDVIILISIYAIFH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
ITVNAPFIAAVLTVFGYSVNATVVIFDRIRDNLKIMRRSDYAKIANVSVNQTLTRSINTT
EEECCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHH
LTTLIILVLMYFLGPKALKDFALPLLIGIISGTYSSIFISTPLWVLIKNREKRRKTSNKP
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHEEEECCCEEEEEECCHHHHHCCCCC
IKA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]