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The map label for this gene is yrdA [C]

Identifier: 167040101

GI number: 167040101

Start: 1493577

End: 1494134

Strand: Direct

Name: yrdA [C]

Synonym: Teth514_1461

Alternate gene names: 167040101

Gene position: 1493577-1494134 (Clockwise)

Preceding gene: 167040100

Following gene: 167040102

Centisome position: 60.78

GC content: 33.33

Gene sequence:

>558_bases
ATGATAATAAAGGAATATAAAAGTATGAAGCCCAAAATAGATGATGAGGCGTATATAGCGGAAACAGCAGAGGTTATTGG
AGATGTAGAAATAAAAAAAGATGCAAATATATGGTATGGGGCTGTGCTGAGAGGAGATATAGATAAAATAGTTGTTGGAG
AAGGAACTAACATACAAGATAATTGCGTTGTACATGTTACAGAAGGACATCCTTGTTATATAGGAAATTACTGTACAATA
GGACATGGGGCGATAGTTCATGCTTGTAAGATAGGAAATAATGTACTAATAGGTATGGGAACGATTATATTAGATGATGC
AGAGATAGGAGATAATTGTATAATTGGAGCTGGTTCATTGGTAACAGGAGGTAAAAAGATTCCAGAGGGCAGTCTTGCTT
TTGGAAATCCTGCAAAAGTTATAAGGAAACTTACTCAAGAGGAAATTGAAAATATTCATCGCTCCTATGAACATTATGTA
GAATTAGCAAAATTACATTTTTCCAACTTTGGGAAATTGACCGTTTACAATAAAAGTAATATAATAGAAAATAGTTGA

Upstream 100 bases:

>100_bases
GATATTAATAAACCTTACGAGCTGGCTTGTGAAATGCAAAAAAGGCGTTTTGAAAATGCGATTGCCATAAAAGCATATCA
AATGCTAAAGGGTGAGGAAA

Downstream 100 bases:

>100_bases
ATTATGAAGGAGGATTCGAATGAGAAGTAGAGGTTTTATCAAATTTTTTTCTGTTGTTCTTATTGCAGCAATAGTTGCAT
ATGTAGCATTTTTTGGAATA

Product: carbonic anhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MIIKEYKSMKPKIDDEAYIAETAEVIGDVEIKKDANIWYGAVLRGDIDKIVVGEGTNIQDNCVVHVTEGHPCYIGNYCTI
GHGAIVHACKIGNNVLIGMGTIILDDAEIGDNCIIGAGSLVTGGKKIPEGSLAFGNPAKVIRKLTQEEIENIHRSYEHYV
ELAKLHFSNFGKLTVYNKSNIIENS

Sequences:

>Translated_185_residues
MIIKEYKSMKPKIDDEAYIAETAEVIGDVEIKKDANIWYGAVLRGDIDKIVVGEGTNIQDNCVVHVTEGHPCYIGNYCTI
GHGAIVHACKIGNNVLIGMGTIILDDAEIGDNCIIGAGSLVTGGKKIPEGSLAFGNPAKVIRKLTQEEIENIHRSYEHYV
ELAKLHFSNFGKLTVYNKSNIIENS
>Mature_185_residues
MIIKEYKSMKPKIDDEAYIAETAEVIGDVEIKKDANIWYGAVLRGDIDKIVVGEGTNIQDNCVVHVTEGHPCYIGNYCTI
GHGAIVHACKIGNNVLIGMGTIILDDAEIGDNCIIGAGSLVTGGKKIPEGSLAFGNPAKVIRKLTQEEIENIHRSYEHYV
ELAKLHFSNFGKLTVYNKSNIIENS

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=167, Percent_Identity=40.7185628742515, Blast_Score=136, Evalue=8e-34,
Organism=Escherichia coli, GI1787667, Length=149, Percent_Identity=40.2684563758389, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI87081681, Length=164, Percent_Identity=33.5365853658537, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: NA

Molecular weight: Translated: 20188; Mature: 20188

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIKEYKSMKPKIDDEAYIAETAEVIGDVEIKKDANIWYGAVLRGDIDKIVVGEGTNIQD
CCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCEEEECCCCCCCC
NCVVHVTEGHPCYIGNYCTIGHGAIVHACKIGNNVLIGMGTIILDDAEIGDNCIIGAGSL
CEEEEEECCCCEEECCEEEECCCCEEEEEECCCEEEEEECEEEEECCCCCCCEEEECCCE
VTGGKKIPEGSLAFGNPAKVIRKLTQEEIENIHRSYEHYVELAKLHFSNFGKLTVYNKSN
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
IIENS
CCCCC
>Mature Secondary Structure
MIIKEYKSMKPKIDDEAYIAETAEVIGDVEIKKDANIWYGAVLRGDIDKIVVGEGTNIQD
CCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCEEEEEEEECCCCEEEECCCCCCCC
NCVVHVTEGHPCYIGNYCTIGHGAIVHACKIGNNVLIGMGTIILDDAEIGDNCIIGAGSL
CEEEEEECCCCEEECCEEEECCCCEEEEEECCCEEEEEECEEEEECCCCCCCEEEECCCE
VTGGKKIPEGSLAFGNPAKVIRKLTQEEIENIHRSYEHYVELAKLHFSNFGKLTVYNKSN
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
IIENS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]