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The map label for this gene is polX [H]

Identifier: 167039309

GI number: 167039309

Start: 675791

End: 677503

Strand: Direct

Name: polX [H]

Synonym: Teth514_0650

Alternate gene names: 167039309

Gene position: 675791-677503 (Clockwise)

Preceding gene: 167039308

Following gene: 167039313

Centisome position: 27.5

GC content: 35.38

Gene sequence:

>1713_bases
ATGGATAAAAAGGAAATTGCCAATATTTTAAACGATATAGGTTTATTGCTAGAGCTTAAAGGGGAAAATCCTTTTAAATC
GAGAGCTTATTATAATGCTGCAAGGACAATAGAGCTATTGGAGGAAGATATAGAAACTCTTGTCAAAGAAGACAGGTTAA
AAGAGATAAAGGGAATAGGGGAAGCAATTAATAAAAAGATTACAGAGCTGGTTTTAACGGGTAAAATGGAATATTATGAG
AATTTAAAAGCATCTATTCCTGAAGGGCTTGTTGAAATGCTTAAAATTCCCGGACTTGGTCCGAAAAAGATAAAGATTAT
ATACGAAAAATTGAATATCACCACAATTAGAGAATTGGAGTACGCTTGTATAGAGAATAGATTGGTAGACCTTCCGGGGT
TTGGGGTAAAGACTCAAAAGAAAATTTTTGAAGGGATACAGTTTGTGAAACAATTTAGCGGTCAGCATTTATTTGCAGAA
GTTTACACAGAAGCGCTTAAATTAAAGGAATATTTAGATATGACTAAAACTGCATTAGTGACGGAAATTGCAGGAAGTTT
GCGAAGGAAAAAAGAGATAGTAAAAGATATTGATATTTTGGCTTCAGCATCAGATTCCTCAAAGGTTATGGAAGCCTTTG
TAAATTACCAAGATGTAAGGGAAGTTATAGCAAAAGGAGATACAAAAACCAGTGTCACTTTAAAGTCGGGTATAAATACA
GATTTAAGAGTTGTAACGGAAAAAGAATTTCCTTATGCACTTCATCATTTCACAGGCAGCAAAGAGCACAATACTGCAAT
GAGGCATAGGGCGAAGCAAATGGGTATCAAAATGAACGAGTACGGCCTTTTTAAAGGAGACAAACTTATAGAATGTAAAA
GCGAAGAGGAGATATTTAATAAATTAGGACTTTTATATATTCCTCCGGAATTAAGAGAAAACATGGGAGAGATAGAAGCG
GCAGAAAAAGGTGAGCTTCCGAAATTAATAGAAGAAAAAGATATAAAGGGAGTTTTCCACGTTCATACGACTTACAGCGA
TGGGGCTAATACCCTGGTAGAAATGGTAGAGGCGGCGAGAAAATTGGGGTATAAGTATATAGGCATCACAGACCACAGCA
AATCTGCTTTTTATGCAGGAGGTCTTAAAGAAGAAGACTTAGTAAGGCAATGGGAGGAAATAGAGGAGTTAAATAAAAAA
TATAACGATATAGTCATTTTCAAAGGGATAGAGTCTGATATACTGCCTGACGGTTCTTTAGATTATGGAGAGGAGATATT
AAAGCAATTTGAATTTGTGATTGCATCCATCCATTCTCATTTCAGGATGAGTAAAGAAGATATGACAAAAAGAATGATAA
AGGCCATAGAAAATAAATATACAACTATAATAGGGCATGTTACAGGAAGGCTTCTTTTAGCGAGAGACAGTTATGAAATA
GATATATATGAAGTTATAGCAGCAGCAGCCCATTATGGCAAAATAATTGAGATAAACGCAAACCCTTATAGGCTTGACTT
AGACTGGCGGTATGTAAAGCATGCAAAAGAAAAAGGAGTAAAACTTGCAATATGTTCTGATGCCCACAGCATAGAAGGCT
TAAATGATGTAAAGTATGGGGTAGGAATTGCTAGAAAAGGCTGGTTGGAGGCAAAAGACGTAATAAACACTTATGAAGTT
CATGAGATCTACAAGTTATTTCAATTGAAGTGA

Upstream 100 bases:

>100_bases
CCCCTTGTCTTTTATAAAGAGAGGTTTTATCTCCTCTCTTTTTCATTTTTTCTGTGGTATAATGTACTAAAGATTTTGTG
TGTTAAAGGGGAAATGTAAA

Downstream 100 bases:

>100_bases
GGTGAATAAATTAATGGGCTGATGGAGCTTTTACACGAGCATGTACAGTAGTAGATGAACAATGAGCTAGCCTAAAGGCG
GCTCTTTTTTTCAAAAGATG

Product: phosphotransferase domain-containing protein

Products: NA

Alternate protein names: DNA polymerase type-X; 3'-5' exodeoxyribonuclease; 3'-5' exonuclease [H]

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MDKKEIANILNDIGLLLELKGENPFKSRAYYNAARTIELLEEDIETLVKEDRLKEIKGIGEAINKKITELVLTGKMEYYE
NLKASIPEGLVEMLKIPGLGPKKIKIIYEKLNITTIRELEYACIENRLVDLPGFGVKTQKKIFEGIQFVKQFSGQHLFAE
VYTEALKLKEYLDMTKTALVTEIAGSLRRKKEIVKDIDILASASDSSKVMEAFVNYQDVREVIAKGDTKTSVTLKSGINT
DLRVVTEKEFPYALHHFTGSKEHNTAMRHRAKQMGIKMNEYGLFKGDKLIECKSEEEIFNKLGLLYIPPELRENMGEIEA
AEKGELPKLIEEKDIKGVFHVHTTYSDGANTLVEMVEAARKLGYKYIGITDHSKSAFYAGGLKEEDLVRQWEEIEELNKK
YNDIVIFKGIESDILPDGSLDYGEEILKQFEFVIASIHSHFRMSKEDMTKRMIKAIENKYTTIIGHVTGRLLLARDSYEI
DIYEVIAAAAHYGKIIEINANPYRLDLDWRYVKHAKEKGVKLAICSDAHSIEGLNDVKYGVGIARKGWLEAKDVINTYEV
HEIYKLFQLK

Sequences:

>Translated_570_residues
MDKKEIANILNDIGLLLELKGENPFKSRAYYNAARTIELLEEDIETLVKEDRLKEIKGIGEAINKKITELVLTGKMEYYE
NLKASIPEGLVEMLKIPGLGPKKIKIIYEKLNITTIRELEYACIENRLVDLPGFGVKTQKKIFEGIQFVKQFSGQHLFAE
VYTEALKLKEYLDMTKTALVTEIAGSLRRKKEIVKDIDILASASDSSKVMEAFVNYQDVREVIAKGDTKTSVTLKSGINT
DLRVVTEKEFPYALHHFTGSKEHNTAMRHRAKQMGIKMNEYGLFKGDKLIECKSEEEIFNKLGLLYIPPELRENMGEIEA
AEKGELPKLIEEKDIKGVFHVHTTYSDGANTLVEMVEAARKLGYKYIGITDHSKSAFYAGGLKEEDLVRQWEEIEELNKK
YNDIVIFKGIESDILPDGSLDYGEEILKQFEFVIASIHSHFRMSKEDMTKRMIKAIENKYTTIIGHVTGRLLLARDSYEI
DIYEVIAAAAHYGKIIEINANPYRLDLDWRYVKHAKEKGVKLAICSDAHSIEGLNDVKYGVGIARKGWLEAKDVINTYEV
HEIYKLFQLK
>Mature_570_residues
MDKKEIANILNDIGLLLELKGENPFKSRAYYNAARTIELLEEDIETLVKEDRLKEIKGIGEAINKKITELVLTGKMEYYE
NLKASIPEGLVEMLKIPGLGPKKIKIIYEKLNITTIRELEYACIENRLVDLPGFGVKTQKKIFEGIQFVKQFSGQHLFAE
VYTEALKLKEYLDMTKTALVTEIAGSLRRKKEIVKDIDILASASDSSKVMEAFVNYQDVREVIAKGDTKTSVTLKSGINT
DLRVVTEKEFPYALHHFTGSKEHNTAMRHRAKQMGIKMNEYGLFKGDKLIECKSEEEIFNKLGLLYIPPELRENMGEIEA
AEKGELPKLIEEKDIKGVFHVHTTYSDGANTLVEMVEAARKLGYKYIGITDHSKSAFYAGGLKEEDLVRQWEEIEELNKK
YNDIVIFKGIESDILPDGSLDYGEEILKQFEFVIASIHSHFRMSKEDMTKRMIKAIENKYTTIIGHVTGRLLLARDSYEI
DIYEVIAAAAHYGKIIEINANPYRLDLDWRYVKHAKEKGVKLAICSDAHSIEGLNDVKYGVGIARKGWLEAKDVINTYEV
HEIYKLFQLK

Specific function: Strictly DNA-template-directed DNA polymerase, preferentially acting on DNA structures containing gaps from one to a few nucleotides and bearing a phosphate group at the 5' end of the downstream DNA. The fact that PolX is able to conduct filling of a sing

COG id: COG1796

COG function: function code L; DNA polymerase IV (family X)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the PHP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002054
- InterPro:   IPR010996
- InterPro:   IPR003583
- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195
- InterPro:   IPR022311 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 65055; Mature: 65055

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKEIANILNDIGLLLELKGENPFKSRAYYNAARTIELLEEDIETLVKEDRLKEIKGIG
CCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAINKKITELVLTGKMEYYENLKASIPEGLVEMLKIPGLGPKKIKIIYEKLNITTIRELE
HHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHCCCCCCHHEEEEEECCCCCHHHHHH
YACIENRLVDLPGFGVKTQKKIFEGIQFVKQFSGQHLFAEVYTEALKLKEYLDMTKTALV
HHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TEIAGSLRRKKEIVKDIDILASASDSSKVMEAFVNYQDVREVIAKGDTKTSVTLKSGINT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCC
DLRVVTEKEFPYALHHFTGSKEHNTAMRHRAKQMGIKMNEYGLFKGDKLIECKSEEEIFN
CEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCEEECCCHHHHHH
KLGLLYIPPELRENMGEIEAAEKGELPKLIEEKDIKGVFHVHTTYSDGANTLVEMVEAAR
HCCCEEECHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHH
KLGYKYIGITDHSKSAFYAGGLKEEDLVRQWEEIEELNKKYNDIVIFKGIESDILPDGSL
HCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC
DYGEEILKQFEFVIASIHSHFRMSKEDMTKRMIKAIENKYTTIIGHVTGRLLLARDSYEI
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEHHHCEEEEECCCCCC
DIYEVIAAAAHYGKIIEINANPYRLDLDWRYVKHAKEKGVKLAICSDAHSIEGLNDVKYG
HHHHHHHHHHHCCCEEEECCCCEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHC
VGIARKGWLEAKDVINTYEVHEIYKLFQLK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKKEIANILNDIGLLLELKGENPFKSRAYYNAARTIELLEEDIETLVKEDRLKEIKGIG
CCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAINKKITELVLTGKMEYYENLKASIPEGLVEMLKIPGLGPKKIKIIYEKLNITTIRELE
HHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHCCCCCCHHEEEEEECCCCCHHHHHH
YACIENRLVDLPGFGVKTQKKIFEGIQFVKQFSGQHLFAEVYTEALKLKEYLDMTKTALV
HHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TEIAGSLRRKKEIVKDIDILASASDSSKVMEAFVNYQDVREVIAKGDTKTSVTLKSGINT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCC
DLRVVTEKEFPYALHHFTGSKEHNTAMRHRAKQMGIKMNEYGLFKGDKLIECKSEEEIFN
CEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHCCEECCCCCCCCCCEEECCCHHHHHH
KLGLLYIPPELRENMGEIEAAEKGELPKLIEEKDIKGVFHVHTTYSDGANTLVEMVEAAR
HCCCEEECHHHHHCCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHH
KLGYKYIGITDHSKSAFYAGGLKEEDLVRQWEEIEELNKKYNDIVIFKGIESDILPDGSL
HCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC
DYGEEILKQFEFVIASIHSHFRMSKEDMTKRMIKAIENKYTTIIGHVTGRLLLARDSYEI
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEHHHCEEEEECCCCCC
DIYEVIAAAAHYGKIIEINANPYRLDLDWRYVKHAKEKGVKLAICSDAHSIEGLNDVKYG
HHHHHHHHHHHCCCEEEECCCCEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHC
VGIARKGWLEAKDVINTYEVHEIYKLFQLK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]