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The map label for this gene is alsB [H]

Identifier: 167038891

GI number: 167038891

Start: 230956

End: 231930

Strand: Direct

Name: alsB [H]

Synonym: Teth514_0222

Alternate gene names: 167038891

Gene position: 230956-231930 (Clockwise)

Preceding gene: 167038890

Following gene: 167038892

Centisome position: 9.4

GC content: 31.79

Gene sequence:

>975_bases
ATGGACAAGGTCATTTTAATTTTGGTCATTTTGATAGCAGCATTGAGCATTTTTTTATATAAGCTTCAAAAGGTAGAAGA
ACCCATTTTTGCAAAAACGCCTCAGTATCACTTTTACATGGTAGCCCAAAATTCTGTAGATCCTTTTTGGAAAGAAGTAA
AAATGGGTGCCATGGATGCTGCAAAACGTTACAATGTTGCAATTGAATTTAATGCGCCAAAATTTAATAACATCCAAGAG
GAACTTCAATATTTGGATATTGCTATACTGTCTAAAGTTGATGGTATAATAACTCATGTTTCAAACAGTAAAGAATTTGT
AGACTTGATTGAAGAAGCCTATAAAGAAGGTATACCAGTAATTACAATAGAAAATGACGCGAAAGATAGCAAAAGACAGG
CTTTTATAGGTACTAACAGTTTTCAATTAGGAGAAGAAGCAGGAAAACTTATGATTCAAGCTACTAAAGGGAAAGCCAAC
ATTGCTATAATTGTCAGTAATGATTATCAATTGGACACTGTAAATCAAAATTTGAAAATCAATGGTTTTTTAGATGCCAT
AAAGGATTATCCTCAAATGAAAGTAGTAAAAGTTTACACTTCAAAATTAGGTACTTTAAGCGCAGAAGAGATTACTCAGT
CAATTATAAGCAGTAAACAAAACATAAATGCCATTTACACTACAGATTCTGTGGATACCATTGGTACTGCACAAGTAATA
GTTGATTTTAACAAGGTGGGAGACATAGCGATTGTAGGGTATGGAGATACAGCGGATATTTTAAGGTATATCGACAAGGG
AATAATATACGGTACAGTTATGAGTGACCCTTACAGAATAGGATATGAAAGTGTAAAATCTATGGTGGAAATTAAAGAAA
AAAATAATGTTTCTACATTTGTTGATATAGGAGTAAATGTTATTACTAAGGACAATGTCAAAGAATATTTCAAAAGAATA
CAATCAATAGAATAA

Upstream 100 bases:

>100_bases
TTGATATTTAATCGTCAATATTTTATTATGAGTGTAAAAGAGACGTAAGGAGGAAATAGCGATTTTTATGAAAACGTTAA
ATGAGAAGTTTTTTAAGTTA

Downstream 100 bases:

>100_bases
GGTGATGGCATGAAAAAAGATATGTGGAGATTTACGGGCATAAGGCGAAAATTGATAGTTTATTACCTCATAATCACTAT
TTTAATGGGTATCACAAGTT

Product: periplasmic binding protein/LacI transcriptional regulator

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: ALBP [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MDKVILILVILIAALSIFLYKLQKVEEPIFAKTPQYHFYMVAQNSVDPFWKEVKMGAMDAAKRYNVAIEFNAPKFNNIQE
ELQYLDIAILSKVDGIITHVSNSKEFVDLIEEAYKEGIPVITIENDAKDSKRQAFIGTNSFQLGEEAGKLMIQATKGKAN
IAIIVSNDYQLDTVNQNLKINGFLDAIKDYPQMKVVKVYTSKLGTLSAEEITQSIISSKQNINAIYTTDSVDTIGTAQVI
VDFNKVGDIAIVGYGDTADILRYIDKGIIYGTVMSDPYRIGYESVKSMVEIKEKNNVSTFVDIGVNVITKDNVKEYFKRI
QSIE

Sequences:

>Translated_324_residues
MDKVILILVILIAALSIFLYKLQKVEEPIFAKTPQYHFYMVAQNSVDPFWKEVKMGAMDAAKRYNVAIEFNAPKFNNIQE
ELQYLDIAILSKVDGIITHVSNSKEFVDLIEEAYKEGIPVITIENDAKDSKRQAFIGTNSFQLGEEAGKLMIQATKGKAN
IAIIVSNDYQLDTVNQNLKINGFLDAIKDYPQMKVVKVYTSKLGTLSAEEITQSIISSKQNINAIYTTDSVDTIGTAQVI
VDFNKVGDIAIVGYGDTADILRYIDKGIIYGTVMSDPYRIGYESVKSMVEIKEKNNVSTFVDIGVNVITKDNVKEYFKRI
QSIE
>Mature_324_residues
MDKVILILVILIAALSIFLYKLQKVEEPIFAKTPQYHFYMVAQNSVDPFWKEVKMGAMDAAKRYNVAIEFNAPKFNNIQE
ELQYLDIAILSKVDGIITHVSNSKEFVDLIEEAYKEGIPVITIENDAKDSKRQAFIGTNSFQLGEEAGKLMIQATKGKAN
IAIIVSNDYQLDTVNQNLKINGFLDAIKDYPQMKVVKVYTSKLGTLSAEEITQSIISSKQNINAIYTTDSVDTIGTAQVI
VDFNKVGDIAIVGYGDTADILRYIDKGIIYGTVMSDPYRIGYESVKSMVEIKEKNNVSTFVDIGVNVITKDNVKEYFKRI
QSIE

Specific function: Part of the binding-protein-dependent transport system AlsBAC for D-allose [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790526, Length=270, Percent_Identity=23.3333333333333, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36319; Mature: 36319

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKVILILVILIAALSIFLYKLQKVEEPIFAKTPQYHFYMVAQNSVDPFWKEVKMGAMDA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCHHHH
AKRYNVAIEFNAPKFNNIQEELQYLDIAILSKVDGIITHVSNSKEFVDLIEEAYKEGIPV
HHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCE
ITIENDAKDSKRQAFIGTNSFQLGEEAGKLMIQATKGKANIAIIVSNDYQLDTVNQNLKI
EEECCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEECCEEEEECCCCEEE
NGFLDAIKDYPQMKVVKVYTSKLGTLSAEEITQSIISSKQNINAIYTTDSVDTIGTAQVI
HHHHHHHHCCCCEEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEE
VDFNKVGDIAIVGYGDTADILRYIDKGIIYGTVMSDPYRIGYESVKSMVEIKEKNNVSTF
EEECCCCCEEEEECCCHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE
VDIGVNVITKDNVKEYFKRIQSIE
EECCEEEEECCCHHHHHHHHHCCC
>Mature Secondary Structure
MDKVILILVILIAALSIFLYKLQKVEEPIFAKTPQYHFYMVAQNSVDPFWKEVKMGAMDA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCHHHH
AKRYNVAIEFNAPKFNNIQEELQYLDIAILSKVDGIITHVSNSKEFVDLIEEAYKEGIPV
HHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCE
ITIENDAKDSKRQAFIGTNSFQLGEEAGKLMIQATKGKANIAIIVSNDYQLDTVNQNLKI
EEECCCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEEECCEEEEECCCCEEE
NGFLDAIKDYPQMKVVKVYTSKLGTLSAEEITQSIISSKQNINAIYTTDSVDTIGTAQVI
HHHHHHHHCCCCEEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEE
VDFNKVGDIAIVGYGDTADILRYIDKGIIYGTVMSDPYRIGYESVKSMVEIKEKNNVSTF
EEECCCCCEEEEECCCHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE
VDIGVNVITKDNVKEYFKRIQSIE
EECCEEEEECCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 8576032; 9401019; 10064713 [H]