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The map label for this gene is ycgM [C]

Identifier: 167038870

GI number: 167038870

Start: 203991

End: 204719

Strand: Direct

Name: ycgM [C]

Synonym: Teth514_0201

Alternate gene names: 167038870

Gene position: 203991-204719 (Clockwise)

Preceding gene: 167038869

Following gene: 167038871

Centisome position: 8.3

GC content: 39.51

Gene sequence:

>729_bases
GTGAGGCTTGTGAGAATAGATAAAGCGTTGAATGAATATGGAATAATTGAAGGGGATAAAGTTATTGCATTTGGAAGTGA
AGGTTTCAATTCTTACAACTTGGAGGAAGTAAAGCTTTTGCCCCCTTGCCTGCCTACAAAAGCTATATGTGTAGGGTTAA
ATTATAGGGATCATATAGAGGAAATGGGGGACAAAGAGCCGGAGGAACCGACATTATTCATAAAACCTTCAACAGCAGTT
ATTGGCCCTGATGATTTTATAGTTATTCCTAAGATGTCAGAGAGGGTTGACTATGAGGGGGAATTGGCTGTTGTCATAGG
CAAAAGAGCGAAAAATGTGTCTGAAAAAGATGCGTTAGATTATGTCCTTGGCTATACGATAGCTAACGATGTAACTGCGC
GGGATTTGCAGGCAAAAGATGGCCAATGGACAAGAGCGAAGTCTTTTGACACTTTTTTGCCCATAGGCCCTTGGATTGAG
ACAGACTTAGACCCATCTTCTTTGGACATAACTACATATGTAAATGGTGAAGTAAAGCAAAAAAGTAACACCAGACACCT
CATATTTAACGTTCCAAAACTTGTAAGTTTTATATCCCACATAATGACTTTAAACCCTGGCGATGTCATATTGACGGGGA
CACCTTCTGGTGTTGGTCCATTAAAACCTGGTGATGTTGTAACTATTGAAATAGAGGGAATAGGTAAACTGACAAACAGA
GTAAAATAA

Upstream 100 bases:

>100_bases
AAATGTAAATATATAAATAGCCTGTAAATGCAGGCTATTTTTTAATCATAAGTTATGTGGTAAAATATTTTTAAATCTAA
AAATTTGAGGGGGTTTTATT

Downstream 100 bases:

>100_bases
AATCAAATGTCATGCAGGGCTTATTTTAGCTGCTGCCAGTTTTGTGTTGTTAAGTACTGCAATGAAAATATTGAAGCAAG
TGAAAAAGATAAAAATGAAA

Product: 5-carboxymethyl-2-hydroxymuconate delta-isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MRLVRIDKALNEYGIIEGDKVIAFGSEGFNSYNLEEVKLLPPCLPTKAICVGLNYRDHIEEMGDKEPEEPTLFIKPSTAV
IGPDDFIVIPKMSERVDYEGELAVVIGKRAKNVSEKDALDYVLGYTIANDVTARDLQAKDGQWTRAKSFDTFLPIGPWIE
TDLDPSSLDITTYVNGEVKQKSNTRHLIFNVPKLVSFISHIMTLNPGDVILTGTPSGVGPLKPGDVVTIEIEGIGKLTNR
VK

Sequences:

>Translated_242_residues
MRLVRIDKALNEYGIIEGDKVIAFGSEGFNSYNLEEVKLLPPCLPTKAICVGLNYRDHIEEMGDKEPEEPTLFIKPSTAV
IGPDDFIVIPKMSERVDYEGELAVVIGKRAKNVSEKDALDYVLGYTIANDVTARDLQAKDGQWTRAKSFDTFLPIGPWIE
TDLDPSSLDITTYVNGEVKQKSNTRHLIFNVPKLVSFISHIMTLNPGDVILTGTPSGVGPLKPGDVVTIEIEGIGKLTNR
VK
>Mature_242_residues
MRLVRIDKALNEYGIIEGDKVIAFGSEGFNSYNLEEVKLLPPCLPTKAICVGLNYRDHIEEMGDKEPEEPTLFIKPSTAV
IGPDDFIVIPKMSERVDYEGELAVVIGKRAKNVSEKDALDYVLGYTIANDVTARDLQAKDGQWTRAKSFDTFLPIGPWIE
TDLDPSSLDITTYVNGEVKQKSNTRHLIFNVPKLVSFISHIMTLNPGDVILTGTPSGVGPLKPGDVVTIEIEGIGKLTNR
VK

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI40786394, Length=219, Percent_Identity=46.5753424657534, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI156231349, Length=219, Percent_Identity=45.662100456621, Blast_Score=188, Evalue=3e-48,
Organism=Homo sapiens, GI13654274, Length=200, Percent_Identity=43, Blast_Score=164, Evalue=8e-41,
Organism=Homo sapiens, GI215422413, Length=197, Percent_Identity=43.1472081218274, Blast_Score=163, Evalue=1e-40,
Organism=Homo sapiens, GI66348062, Length=192, Percent_Identity=43.75, Blast_Score=161, Evalue=4e-40,
Organism=Escherichia coli, GI1787428, Length=203, Percent_Identity=42.3645320197044, Blast_Score=154, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI17557057, Length=190, Percent_Identity=42.1052631578947, Blast_Score=149, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6324161, Length=224, Percent_Identity=33.0357142857143, Blast_Score=121, Evalue=1e-28,
Organism=Drosophila melanogaster, GI28572127, Length=220, Percent_Identity=45.4545454545455, Blast_Score=186, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24663695, Length=217, Percent_Identity=40.5529953917051, Blast_Score=157, Evalue=5e-39,
Organism=Drosophila melanogaster, GI28571789, Length=202, Percent_Identity=42.0792079207921, Blast_Score=150, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 26688; Mature: 26688

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVRIDKALNEYGIIEGDKVIAFGSEGFNSYNLEEVKLLPPCLPTKAICVGLNYRDHIE
CEEEEECHHHHHCCCEECCEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEECCCHHHHH
EMGDKEPEEPTLFIKPSTAVIGPDDFIVIPKMSERVDYEGELAVVIGKRAKNVSEKDALD
HHCCCCCCCCEEEECCCEEEECCCCEEEECCCHHCCCCCCCEEEEEECCCCCCCHHHHHH
YVLGYTIANDVTARDLQAKDGQWTRAKSFDTFLPIGPWIETDLDPSSLDITTYVNGEVKQ
HHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCCCCEEEEEEECCEEEC
KSNTRHLIFNVPKLVSFISHIMTLNPGDVILTGTPSGVGPLKPGDVVTIEIEGIGKLTNR
CCCCEEEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCHHHHHC
VK
CC
>Mature Secondary Structure
MRLVRIDKALNEYGIIEGDKVIAFGSEGFNSYNLEEVKLLPPCLPTKAICVGLNYRDHIE
CEEEEECHHHHHCCCEECCEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEECCCHHHHH
EMGDKEPEEPTLFIKPSTAVIGPDDFIVIPKMSERVDYEGELAVVIGKRAKNVSEKDALD
HHCCCCCCCCEEEECCCEEEECCCCEEEECCCHHCCCCCCCEEEEEECCCCCCCHHHHHH
YVLGYTIANDVTARDLQAKDGQWTRAKSFDTFLPIGPWIETDLDPSSLDITTYVNGEVKQ
HHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCCCCEEEEEEECCEEEC
KSNTRHLIFNVPKLVSFISHIMTLNPGDVILTGTPSGVGPLKPGDVVTIEIEGIGKLTNR
CCCCEEEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCHHHHHC
VK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]