| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167038866
Identifier: 167038866
GI number: 167038866
Start: 198013
End: 199233
Strand: Direct
Name: 167038866
Synonym: Teth514_0197
Alternate gene names: NA
Gene position: 198013-199233 (Clockwise)
Preceding gene: 167038865
Following gene: 167038867
Centisome position: 8.06
GC content: 39.23
Gene sequence:
>1221_bases ATGGATTTAGTTTACTCTCACGTTTGCGGATTAGATGTCCATAAAAAGAATGTCGTAGCTTGTATAATAACACCAGAAGG TAAAGAAATCCGCACTTTTTCAACTATGACCGATGACCTTATTGCATTAAAAGAATTTATTAAAGCTAAAGGTTGTTCTG TTGTTGCTATGGAAAGTACCGGCTCTTATTGGAAACCTATTTACAATCTACTTGAGCTTGAGAGCATTAAAATCCTACTC GTCAATGCTAAGCATATTAAAAATGTCCCTGGTAGAAAAACCGATGTAAAAGATGCTGAGTGGATAGCAAGTCTCTTACA ACATGGCCTTTTGCAAGGCAGCTTTGTGCCAGATCGTGAACAAAGAGAACTTCGCGAGCTTGTACGCTATAGAAAAAGCC TCATTGAAGAAAAATCAAGAGAACTTAATCGCATACAAAAGGTTTTAGAAGGAGCTAATATCAAACTGTCTTCGGTAGTC TCTGATATCAACGGGGCATCCAGTCGTTCTATACTTGAGGCTATTATAAATGGTGAAGAAAATCCCGAAACCCTGGCTGA GCTTTCTCAAGGCAAGCTAAAAAATAAAATGGATGAACTAAAACGCGCTTTAAAAGGCTTGATCAATCATCACCAAAGGA TGCTTCTGGAAATACAGCTTAGACATATTGATTACCTTGATGAAGAAATAGCAAAATTAGACGAAGAAATTAAAAATCGA ATGCTCCCTTTTGAAAAAGACCTGGCACTGCTGGATACAATCCCTGGAGTCGGAAGAAGAACTGCAGAACAAATAATAGC CGAAATCGGCACGAATATGGAACAGTTCCCCTCTGCTGCCCATTTGTGTTCTTGGGCAGGGTTGTGTCCAGGTCATAATG AAAGTGCTGGTAAACAAAAGTCTGCAAGAACTCGAAAAGGTAACCAAAAATTGCGAAGCTCTCTTATTGAAGCTGCCAGA GCTGCCTCAAGGGCAAAAGATACTTATCTCTCAAGTCAGTACCACCGCATCGCTGCTCGAAGAGGAGCAAACCGTGCAGC AGTTGCAGTGGCACATAGCATTTTAATTATAGTTTATCATATTCTCAAGCAAAAGCAACCATATATTGAATTAGGTCCTA CTTATTATGAAGAGAAAAAGCGTAATATGATTATTCGTCAATCTTTAAAAAAGCTAGAGTCTTTAGGCCTTAAGGTCACG GTCGAATCTGCAGTGTCTTAA
Upstream 100 bases:
>100_bases GGAAGCACGCAGGATAGAATAACCCCTTATGGTTGTTGCACCAGCTCTTCAATTTTACAGTCGCTATCGTTCAAATTTTA AAAAAGGAGTTGGCTCTTTC
Downstream 100 bases:
>100_bases CTTTTAATTTAACTTTATTAACCATTTATTTATCCCATATTTTTACATCGGTATGGGTTTAGTTTTTTGTTGCCTTTTTG AGAGACACTATTTTCAGGAT
Product: transposase IS116/IS110/IS902 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MDLVYSHVCGLDVHKKNVVACIITPEGKEIRTFSTMTDDLIALKEFIKAKGCSVVAMESTGSYWKPIYNLLELESIKILL VNAKHIKNVPGRKTDVKDAEWIASLLQHGLLQGSFVPDREQRELRELVRYRKSLIEEKSRELNRIQKVLEGANIKLSSVV SDINGASSRSILEAIINGEENPETLAELSQGKLKNKMDELKRALKGLINHHQRMLLEIQLRHIDYLDEEIAKLDEEIKNR MLPFEKDLALLDTIPGVGRRTAEQIIAEIGTNMEQFPSAAHLCSWAGLCPGHNESAGKQKSARTRKGNQKLRSSLIEAAR AASRAKDTYLSSQYHRIAARRGANRAAVAVAHSILIIVYHILKQKQPYIELGPTYYEEKKRNMIIRQSLKKLESLGLKVT VESAVS
Sequences:
>Translated_406_residues MDLVYSHVCGLDVHKKNVVACIITPEGKEIRTFSTMTDDLIALKEFIKAKGCSVVAMESTGSYWKPIYNLLELESIKILL VNAKHIKNVPGRKTDVKDAEWIASLLQHGLLQGSFVPDREQRELRELVRYRKSLIEEKSRELNRIQKVLEGANIKLSSVV SDINGASSRSILEAIINGEENPETLAELSQGKLKNKMDELKRALKGLINHHQRMLLEIQLRHIDYLDEEIAKLDEEIKNR MLPFEKDLALLDTIPGVGRRTAEQIIAEIGTNMEQFPSAAHLCSWAGLCPGHNESAGKQKSARTRKGNQKLRSSLIEAAR AASRAKDTYLSSQYHRIAARRGANRAAVAVAHSILIIVYHILKQKQPYIELGPTYYEEKKRNMIIRQSLKKLESLGLKVT VESAVS >Mature_406_residues MDLVYSHVCGLDVHKKNVVACIITPEGKEIRTFSTMTDDLIALKEFIKAKGCSVVAMESTGSYWKPIYNLLELESIKILL VNAKHIKNVPGRKTDVKDAEWIASLLQHGLLQGSFVPDREQRELRELVRYRKSLIEEKSRELNRIQKVLEGANIKLSSVV SDINGASSRSILEAIINGEENPETLAELSQGKLKNKMDELKRALKGLINHHQRMLLEIQLRHIDYLDEEIAKLDEEIKNR MLPFEKDLALLDTIPGVGRRTAEQIIAEIGTNMEQFPSAAHLCSWAGLCPGHNESAGKQKSARTRKGNQKLRSSLIEAAR AASRAKDTYLSSQYHRIAARRGANRAAVAVAHSILIIVYHILKQKQPYIELGPTYYEEKKRNMIIRQSLKKLESLGLKVT VESAVS
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 45702; Mature: 45702
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLVYSHVCGLDVHKKNVVACIITPEGKEIRTFSTMTDDLIALKEFIKAKGCSVVAMEST CCCHHHHHCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCC GSYWKPIYNLLELESIKILLVNAKHIKNVPGRKTDVKDAEWIASLLQHGLLQGSFVPDRE CCHHHHHHHHHHHCCEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH QRELRELVRYRKSLIEEKSRELNRIQKVLEGANIKLSSVVSDINGASSRSILEAIINGEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC NPETLAELSQGKLKNKMDELKRALKGLINHHQRMLLEIQLRHIDYLDEEIAKLDEEIKNR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MLPFEKDLALLDTIPGVGRRTAEQIIAEIGTNMEQFPSAAHLCSWAGLCPGHNESAGKQK CCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHCCCCCCCCCCCCHH SARTRKGNQKLRSSLIEAARAASRAKDTYLSSQYHRIAARRGANRAAVAVAHSILIIVYH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ILKQKQPYIELGPTYYEEKKRNMIIRQSLKKLESLGLKVTVESAVS HHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC >Mature Secondary Structure MDLVYSHVCGLDVHKKNVVACIITPEGKEIRTFSTMTDDLIALKEFIKAKGCSVVAMEST CCCHHHHHCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCC GSYWKPIYNLLELESIKILLVNAKHIKNVPGRKTDVKDAEWIASLLQHGLLQGSFVPDRE CCHHHHHHHHHHHCCEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH QRELRELVRYRKSLIEEKSRELNRIQKVLEGANIKLSSVVSDINGASSRSILEAIINGEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCC NPETLAELSQGKLKNKMDELKRALKGLINHHQRMLLEIQLRHIDYLDEEIAKLDEEIKNR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MLPFEKDLALLDTIPGVGRRTAEQIIAEIGTNMEQFPSAAHLCSWAGLCPGHNESAGKQK CCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHCCCCCCCCCCCCHH SARTRKGNQKLRSSLIEAARAASRAKDTYLSSQYHRIAARRGANRAAVAVAHSILIIVYH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ILKQKQPYIELGPTYYEEKKRNMIIRQSLKKLESLGLKVTVESAVS HHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1324903; 12704232 [H]