Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

Click here to switch to the map view.

The map label for this gene is ygfT [C]

Identifier: 167038788

GI number: 167038788

Start: 111610

End: 112728

Strand: Direct

Name: ygfT [C]

Synonym: Teth514_0115

Alternate gene names: 167038788

Gene position: 111610-112728 (Clockwise)

Preceding gene: 167038787

Following gene: 167038789

Centisome position: 4.54

GC content: 36.82

Gene sequence:

>1119_bases
ATGAAATCAAAGGTATATTTTTACAATCTGAGAGCGAATAAAGCCAGCAGTAGTTTGTCTTCCAAAGTAGCGAGAATTTT
TGATGTAGCAGGTTTTAAAAACATTATTGATAAAAATGACTTGGTAGCTATAAAAATTCATTTTGGAGAAAAGGGAAACA
ACGCTTACATCAACCCTATATATGTAAGAAAAGTGGTTGATAAAATCAAGAGTTATGGGGGAAAGCCCTTTTTAACAGAT
ACAAATACTCTTTACAAAGGTAGTCGTTCAAATGCAGTTGACCATTTGACAACAGCAATTGAAAATGGTTTTGCATATGC
TGTTGTAAATGCACCAATAATAATTGCTGACGGCATTTTAAGTAAAGATTCTGTAGAAGTGAAAATTGACAAAAAACATT
TTGATACTGTAAAAATTGCTTCAAATATTTTTTTTGCAAACTCAATGATTGTAATGTCACACTTTAAAGGTCATGAATTG
GCTGGTTTTGGAGGAGCCATCAAAAACTTAGCTATGGGGTGTGCACCTGCGGCAGGAAAACAACAGCAGCATTCAACAGT
GCAGCCTGTTGTAGGAAAGGGATGTACCGCATGTCAAATGTGTATCAGGAATTGCCCCGTAAATGCGATATCTTTGGTCA
ATGGTTCAGCTTATATTGACCCTTCTATATGTATAGGGTGTGGAGAATGCGTGTCCATTTGTCAATATGGCGTGATAAAG
CCTCAATGGGGAACTGATATGGATGCTTTTGTAGAGAGAATGACGGAATACGCATATGGCGCTTATTCTACAAAAAAAGG
CAAAATTGCGTTTATAAATTTTGTCATGAATGTTACACCACTTTGCGATTGTACGCCTTGGAGTGATGCTCCTATTGTTC
CTGATATAGGAATATTAGCTTCCTTTGACCCTGTTGCTATAGATCAGGCAAGCTATGACCTTGTGAATCAGCAATTTGGT
CACAAAGGCACAGCTTTAGAAGAAGCGGGATATGGCATGAATCCTGGAGAAGACAAATTTAAAGCTTTGCACCCTGAAAC
AAAAGGAGAACTACAATTAAAATATGGAGAAGAAATTGGCTTGGGTACAAGAGATTATGAACTTGTTGAACTAAAATAG

Upstream 100 bases:

>100_bases
TATTAATCACTGACAAATCTGCCCTCTCTTATTTTAAAAAAGGCATAAAATTTGTAAATTCTAAACTTGTAAGAAATTAA
TTTAAAAATGAGGTGATATC

Downstream 100 bases:

>100_bases
CAGGTTAATCCTGCTATTTTTTAATAATTTTTAGTGACTTATGAGAACGTTTGTAGTATTATATAATTAAAGAGGGGTGG
GGAGGGGGATTTATGGAAAA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKSKVYFYNLRANKASSSLSSKVARIFDVAGFKNIIDKNDLVAIKIHFGEKGNNAYINPIYVRKVVDKIKSYGGKPFLTD
TNTLYKGSRSNAVDHLTTAIENGFAYAVVNAPIIIADGILSKDSVEVKIDKKHFDTVKIASNIFFANSMIVMSHFKGHEL
AGFGGAIKNLAMGCAPAAGKQQQHSTVQPVVGKGCTACQMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIK
PQWGTDMDAFVERMTEYAYGAYSTKKGKIAFINFVMNVTPLCDCTPWSDAPIVPDIGILASFDPVAIDQASYDLVNQQFG
HKGTALEEAGYGMNPGEDKFKALHPETKGELQLKYGEEIGLGTRDYELVELK

Sequences:

>Translated_372_residues
MKSKVYFYNLRANKASSSLSSKVARIFDVAGFKNIIDKNDLVAIKIHFGEKGNNAYINPIYVRKVVDKIKSYGGKPFLTD
TNTLYKGSRSNAVDHLTTAIENGFAYAVVNAPIIIADGILSKDSVEVKIDKKHFDTVKIASNIFFANSMIVMSHFKGHEL
AGFGGAIKNLAMGCAPAAGKQQQHSTVQPVVGKGCTACQMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIK
PQWGTDMDAFVERMTEYAYGAYSTKKGKIAFINFVMNVTPLCDCTPWSDAPIVPDIGILASFDPVAIDQASYDLVNQQFG
HKGTALEEAGYGMNPGEDKFKALHPETKGELQLKYGEEIGLGTRDYELVELK
>Mature_372_residues
MKSKVYFYNLRANKASSSLSSKVARIFDVAGFKNIIDKNDLVAIKIHFGEKGNNAYINPIYVRKVVDKIKSYGGKPFLTD
TNTLYKGSRSNAVDHLTTAIENGFAYAVVNAPIIIADGILSKDSVEVKIDKKHFDTVKIASNIFFANSMIVMSHFKGHEL
AGFGGAIKNLAMGCAPAAGKQQQHSTVQPVVGKGCTACQMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIK
PQWGTDMDAFVERMTEYAYGAYSTKKGKIAFINFVMNVTPLCDCTPWSDAPIVPDIGILASFDPVAIDQASYDLVNQQFG
HKGTALEEAGYGMNPGEDKFKALHPETKGELQLKYGEEIGLGTRDYELVELK

Specific function: Unknown

COG id: COG2768

COG function: function code R; Uncharacterized Fe-S center protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40436; Mature: 40436

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKVYFYNLRANKASSSLSSKVARIFDVAGFKNIIDKNDLVAIKIHFGEKGNNAYINPI
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEECHH
YVRKVVDKIKSYGGKPFLTDTNTLYKGSRSNAVDHLTTAIENGFAYAVVNAPIIIADGIL
HHHHHHHHHHHCCCCCEEECCHHHCCCCCCCHHHHHHHHHHCCEEEEEECCCEEEECCCC
SKDSVEVKIDKKHFDTVKIASNIFFANSMIVMSHFKGHELAGFGGAIKNLAMGCAPAAGK
CCCCEEEEECCCCCCEEEHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCC
QQQHSTVQPVVGKGCTACQMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIK
CCCCCCCCHHHCCCCHHHHHHHHHCCCCEEEEECCCEEECCHHEECHHHHHHHHHHCCCC
PQWGTDMDAFVERMTEYAYGAYSTKKGKIAFINFVMNVTPLCDCTPWSDAPIVPDIGILA
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHC
SFDPVAIDQASYDLVNQQFGHKGTALEEAGYGMNPGEDKFKALHPETKGELQLKYGEEIG
CCCCEEECCHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCC
LGTRDYELVELK
CCCCCCEEEEEC
>Mature Secondary Structure
MKSKVYFYNLRANKASSSLSSKVARIFDVAGFKNIIDKNDLVAIKIHFGEKGNNAYINPI
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEECHH
YVRKVVDKIKSYGGKPFLTDTNTLYKGSRSNAVDHLTTAIENGFAYAVVNAPIIIADGIL
HHHHHHHHHHHCCCCCEEECCHHHCCCCCCCHHHHHHHHHHCCEEEEEECCCEEEECCCC
SKDSVEVKIDKKHFDTVKIASNIFFANSMIVMSHFKGHELAGFGGAIKNLAMGCAPAAGK
CCCCEEEEECCCCCCEEEHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCC
QQQHSTVQPVVGKGCTACQMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIK
CCCCCCCCHHHCCCCHHHHHHHHHCCCCEEEEECCCEEECCHHEECHHHHHHHHHHCCCC
PQWGTDMDAFVERMTEYAYGAYSTKKGKIAFINFVMNVTPLCDCTPWSDAPIVPDIGILA
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHC
SFDPVAIDQASYDLVNQQFGHKGTALEEAGYGMNPGEDKFKALHPETKGELQLKYGEEIG
CCCCEEECCHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCC
LGTRDYELVELK
CCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA