Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
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Accession | NC_010320 |
Length | 2,457,259 |
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The map label for this gene is ygfT [C]
Identifier: 167038788
GI number: 167038788
Start: 111610
End: 112728
Strand: Direct
Name: ygfT [C]
Synonym: Teth514_0115
Alternate gene names: 167038788
Gene position: 111610-112728 (Clockwise)
Preceding gene: 167038787
Following gene: 167038789
Centisome position: 4.54
GC content: 36.82
Gene sequence:
>1119_bases ATGAAATCAAAGGTATATTTTTACAATCTGAGAGCGAATAAAGCCAGCAGTAGTTTGTCTTCCAAAGTAGCGAGAATTTT TGATGTAGCAGGTTTTAAAAACATTATTGATAAAAATGACTTGGTAGCTATAAAAATTCATTTTGGAGAAAAGGGAAACA ACGCTTACATCAACCCTATATATGTAAGAAAAGTGGTTGATAAAATCAAGAGTTATGGGGGAAAGCCCTTTTTAACAGAT ACAAATACTCTTTACAAAGGTAGTCGTTCAAATGCAGTTGACCATTTGACAACAGCAATTGAAAATGGTTTTGCATATGC TGTTGTAAATGCACCAATAATAATTGCTGACGGCATTTTAAGTAAAGATTCTGTAGAAGTGAAAATTGACAAAAAACATT TTGATACTGTAAAAATTGCTTCAAATATTTTTTTTGCAAACTCAATGATTGTAATGTCACACTTTAAAGGTCATGAATTG GCTGGTTTTGGAGGAGCCATCAAAAACTTAGCTATGGGGTGTGCACCTGCGGCAGGAAAACAACAGCAGCATTCAACAGT GCAGCCTGTTGTAGGAAAGGGATGTACCGCATGTCAAATGTGTATCAGGAATTGCCCCGTAAATGCGATATCTTTGGTCA ATGGTTCAGCTTATATTGACCCTTCTATATGTATAGGGTGTGGAGAATGCGTGTCCATTTGTCAATATGGCGTGATAAAG CCTCAATGGGGAACTGATATGGATGCTTTTGTAGAGAGAATGACGGAATACGCATATGGCGCTTATTCTACAAAAAAAGG CAAAATTGCGTTTATAAATTTTGTCATGAATGTTACACCACTTTGCGATTGTACGCCTTGGAGTGATGCTCCTATTGTTC CTGATATAGGAATATTAGCTTCCTTTGACCCTGTTGCTATAGATCAGGCAAGCTATGACCTTGTGAATCAGCAATTTGGT CACAAAGGCACAGCTTTAGAAGAAGCGGGATATGGCATGAATCCTGGAGAAGACAAATTTAAAGCTTTGCACCCTGAAAC AAAAGGAGAACTACAATTAAAATATGGAGAAGAAATTGGCTTGGGTACAAGAGATTATGAACTTGTTGAACTAAAATAG
Upstream 100 bases:
>100_bases TATTAATCACTGACAAATCTGCCCTCTCTTATTTTAAAAAAGGCATAAAATTTGTAAATTCTAAACTTGTAAGAAATTAA TTTAAAAATGAGGTGATATC
Downstream 100 bases:
>100_bases CAGGTTAATCCTGCTATTTTTTAATAATTTTTAGTGACTTATGAGAACGTTTGTAGTATTATATAATTAAAGAGGGGTGG GGAGGGGGATTTATGGAAAA
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MKSKVYFYNLRANKASSSLSSKVARIFDVAGFKNIIDKNDLVAIKIHFGEKGNNAYINPIYVRKVVDKIKSYGGKPFLTD TNTLYKGSRSNAVDHLTTAIENGFAYAVVNAPIIIADGILSKDSVEVKIDKKHFDTVKIASNIFFANSMIVMSHFKGHEL AGFGGAIKNLAMGCAPAAGKQQQHSTVQPVVGKGCTACQMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIK PQWGTDMDAFVERMTEYAYGAYSTKKGKIAFINFVMNVTPLCDCTPWSDAPIVPDIGILASFDPVAIDQASYDLVNQQFG HKGTALEEAGYGMNPGEDKFKALHPETKGELQLKYGEEIGLGTRDYELVELK
Sequences:
>Translated_372_residues MKSKVYFYNLRANKASSSLSSKVARIFDVAGFKNIIDKNDLVAIKIHFGEKGNNAYINPIYVRKVVDKIKSYGGKPFLTD TNTLYKGSRSNAVDHLTTAIENGFAYAVVNAPIIIADGILSKDSVEVKIDKKHFDTVKIASNIFFANSMIVMSHFKGHEL AGFGGAIKNLAMGCAPAAGKQQQHSTVQPVVGKGCTACQMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIK PQWGTDMDAFVERMTEYAYGAYSTKKGKIAFINFVMNVTPLCDCTPWSDAPIVPDIGILASFDPVAIDQASYDLVNQQFG HKGTALEEAGYGMNPGEDKFKALHPETKGELQLKYGEEIGLGTRDYELVELK >Mature_372_residues MKSKVYFYNLRANKASSSLSSKVARIFDVAGFKNIIDKNDLVAIKIHFGEKGNNAYINPIYVRKVVDKIKSYGGKPFLTD TNTLYKGSRSNAVDHLTTAIENGFAYAVVNAPIIIADGILSKDSVEVKIDKKHFDTVKIASNIFFANSMIVMSHFKGHEL AGFGGAIKNLAMGCAPAAGKQQQHSTVQPVVGKGCTACQMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIK PQWGTDMDAFVERMTEYAYGAYSTKKGKIAFINFVMNVTPLCDCTPWSDAPIVPDIGILASFDPVAIDQASYDLVNQQFG HKGTALEEAGYGMNPGEDKFKALHPETKGELQLKYGEEIGLGTRDYELVELK
Specific function: Unknown
COG id: COG2768
COG function: function code R; Uncharacterized Fe-S center protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40436; Mature: 40436
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKVYFYNLRANKASSSLSSKVARIFDVAGFKNIIDKNDLVAIKIHFGEKGNNAYINPI CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEECHH YVRKVVDKIKSYGGKPFLTDTNTLYKGSRSNAVDHLTTAIENGFAYAVVNAPIIIADGIL HHHHHHHHHHHCCCCCEEECCHHHCCCCCCCHHHHHHHHHHCCEEEEEECCCEEEECCCC SKDSVEVKIDKKHFDTVKIASNIFFANSMIVMSHFKGHELAGFGGAIKNLAMGCAPAAGK CCCCEEEEECCCCCCEEEHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCC QQQHSTVQPVVGKGCTACQMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIK CCCCCCCCHHHCCCCHHHHHHHHHCCCCEEEEECCCEEECCHHEECHHHHHHHHHHCCCC PQWGTDMDAFVERMTEYAYGAYSTKKGKIAFINFVMNVTPLCDCTPWSDAPIVPDIGILA CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHC SFDPVAIDQASYDLVNQQFGHKGTALEEAGYGMNPGEDKFKALHPETKGELQLKYGEEIG CCCCEEECCHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCC LGTRDYELVELK CCCCCCEEEEEC >Mature Secondary Structure MKSKVYFYNLRANKASSSLSSKVARIFDVAGFKNIIDKNDLVAIKIHFGEKGNNAYINPI CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEECHH YVRKVVDKIKSYGGKPFLTDTNTLYKGSRSNAVDHLTTAIENGFAYAVVNAPIIIADGIL HHHHHHHHHHHCCCCCEEECCHHHCCCCCCCHHHHHHHHHHCCEEEEEECCCEEEECCCC SKDSVEVKIDKKHFDTVKIASNIFFANSMIVMSHFKGHELAGFGGAIKNLAMGCAPAAGK CCCCEEEEECCCCCCEEEHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCC QQQHSTVQPVVGKGCTACQMCIRNCPVNAISLVNGSAYIDPSICIGCGECVSICQYGVIK CCCCCCCCHHHCCCCHHHHHHHHHCCCCEEEEECCCEEECCHHEECHHHHHHHHHHCCCC PQWGTDMDAFVERMTEYAYGAYSTKKGKIAFINFVMNVTPLCDCTPWSDAPIVPDIGILA CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHC SFDPVAIDQASYDLVNQQFGHKGTALEEAGYGMNPGEDKFKALHPETKGELQLKYGEEIG CCCCEEECCHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCC LGTRDYELVELK CCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA