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Identifier: 16520049

GI number: 16520049

Start: 71927

End: 72817

Strand: Reverse

Name: Not Available

Synonym: NGR_a00540

Alternate gene names: NA

Gene position: 72817-71927 (Counterclockwise)

Preceding gene: 255767011

Following gene: 16520050

Centisome position: 13.58

GC content: 55.22

Gene sequence:

>891_bases
GTGAACGACGCCATTTCGCTTCAATTCAAAGTTATCTCAGGGCTCTATTGTGAACTGACTGGTACGACGGCTCTAGAAAC
GAGCTTGATCGGTAGCGGCCTCGACGCCGACATAGTGTTCGTCGAGCAGGGCCTCGCGCCGCATCATTTTCGCGTCACTC
TTCTGGGCAAAACACTTGAGGTCGAGGCGCTTGCTGCCGGTCTCAGCATAGAGGGAAACGGGAATATTGCCGCAGGCGAG
CGGGTTGTCGCGCCCCTTCCTGTCGTCATTCATGCAGGCGCGATGTCCATTCTCTGGTCAGTGCAGGATGCAGCGTCGTC
TGGTTCGATCGGTAAACCACGCCTCTCGATATCTGTGCTCGCCTTGGTGTTGCTCGGTTCTCTCGGGATCGGCGTGCTCT
CGGCCATTTTCTCTTACTACGACAACGCTGTTGTATCGAACGCCGATTTATCTGGTGAGGCCCGGGAACCCAAGCTGCCT
GATAATCGCACTGATGATGAGACTGCATTCACAGCCGCTAAAGCCCTGCAACAGGAAGTCGACAGAGCCGGTCTGTCCAA
CATTAAGATCAGCGCCGCTGAGGGTGTTGTGACAGTCGAAGGCACGGTCACGTCTGCTTCGGCCATCAGTTGGCATAAAG
TGCAGCAGTGGTTCGATCATCGGACGAGGGGCGCTCTAGCGCTGTTGAATGGAGTGATTATCGACGATGAGAAGGCGCCA
TCCGCAATCGCAGTCGAAGCTGTCTGGCGTGGGTCGCTTCCGTATCTTGTCATCAAAGGAGAGAAATATTTCGTCGGCGC
TCTTTTGGATGATGGTTGGATGGTCGAACGGATCGAGGACGGTCGTGTAATGCTAAGCCGAAATGGCCGCCTTGCTGCTG
TCCCGTATTAA

Upstream 100 bases:

>100_bases
TGGGGCTCTAGGCACTGCGTAGCACAATTGGCACGAAGTGGAGCCGAGATGAGCCGCATGCCACTCGCCGTGCGGCTTCT
CTTTTGTCTGGATATCGTCA

Downstream 100 bases:

>100_bases
AGTATTCCAGCGCAGGGCTGACGATCTTGGACAGACTTGATGACCGGTCAACTTCGCACTTGCCTTTGAATCTTATGCGC
AGCCATCCGCCGCAGGGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNDAISLQFKVISGLYCELTGTTALETSLIGSGLDADIVFVEQGLAPHHFRVTLLGKTLEVEALAAGLSIEGNGNIAAGE
RVVAPLPVVIHAGAMSILWSVQDAASSGSIGKPRLSISVLALVLLGSLGIGVLSAIFSYYDNAVVSNADLSGEAREPKLP
DNRTDDETAFTAAKALQQEVDRAGLSNIKISAAEGVVTVEGTVTSASAISWHKVQQWFDHRTRGALALLNGVIIDDEKAP
SAIAVEAVWRGSLPYLVIKGEKYFVGALLDDGWMVERIEDGRVMLSRNGRLAAVPY

Sequences:

>Translated_296_residues
MNDAISLQFKVISGLYCELTGTTALETSLIGSGLDADIVFVEQGLAPHHFRVTLLGKTLEVEALAAGLSIEGNGNIAAGE
RVVAPLPVVIHAGAMSILWSVQDAASSGSIGKPRLSISVLALVLLGSLGIGVLSAIFSYYDNAVVSNADLSGEAREPKLP
DNRTDDETAFTAAKALQQEVDRAGLSNIKISAAEGVVTVEGTVTSASAISWHKVQQWFDHRTRGALALLNGVIIDDEKAP
SAIAVEAVWRGSLPYLVIKGEKYFVGALLDDGWMVERIEDGRVMLSRNGRLAAVPY
>Mature_296_residues
MNDAISLQFKVISGLYCELTGTTALETSLIGSGLDADIVFVEQGLAPHHFRVTLLGKTLEVEALAAGLSIEGNGNIAAGE
RVVAPLPVVIHAGAMSILWSVQDAASSGSIGKPRLSISVLALVLLGSLGIGVLSAIFSYYDNAVVSNADLSGEAREPKLP
DNRTDDETAFTAAKALQQEVDRAGLSNIKISAAEGVVTVEGTVTSASAISWHKVQQWFDHRTRGALALLNGVIIDDEKAP
SAIAVEAVWRGSLPYLVIKGEKYFVGALLDDGWMVERIEDGRVMLSRNGRLAAVPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4YQ_RHISN (P55725)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444169.1
- GeneID:   962525
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00540
- HOGENOM:   HBG364743
- ProtClustDB:   CLSK506584

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31252; Mature: 31252

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xaec5e78)-; HASH(0xb01e610)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDAISLQFKVISGLYCELTGTTALETSLIGSGLDADIVFVEQGLAPHHFRVTLLGKTLE
CCCCEEEEEEEECCEEEEEECCCHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCEEE
VEALAAGLSIEGNGNIAAGERVVAPLPVVIHAGAMSILWSVQDAASSGSIGKPRLSISVL
EEEEEECEEEECCCCEECCCEEECCCCEEEECCHHHEEEEHHHHCCCCCCCCCCHHHHHH
ALVLLGSLGIGVLSAIFSYYDNAVVSNADLSGEAREPKLPDNRTDDETAFTAAKALQQEV
HHHHHHHCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
DRAGLSNIKISAAEGVVTVEGTVTSASAISWHKVQQWFDHRTRGALALLNGVIIDDEKAP
HHCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHCCEEEECCCCC
SAIAVEAVWRGSLPYLVIKGEKYFVGALLDDGWMVERIEDGRVMLSRNGRLAAVPY
CEEEEEEEECCCCCEEEEECCEEEEEEEECCCEEEEEECCCEEEEECCCCEEECCH
>Mature Secondary Structure
MNDAISLQFKVISGLYCELTGTTALETSLIGSGLDADIVFVEQGLAPHHFRVTLLGKTLE
CCCCEEEEEEEECCEEEEEECCCHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCEEE
VEALAAGLSIEGNGNIAAGERVVAPLPVVIHAGAMSILWSVQDAASSGSIGKPRLSISVL
EEEEEECEEEECCCCEECCCEEECCCCEEEECCHHHEEEEHHHHCCCCCCCCCCHHHHHH
ALVLLGSLGIGVLSAIFSYYDNAVVSNADLSGEAREPKLPDNRTDDETAFTAAKALQQEV
HHHHHHHCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
DRAGLSNIKISAAEGVVTVEGTVTSASAISWHKVQQWFDHRTRGALALLNGVIIDDEKAP
HHCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHCCEEEECCCCC
SAIAVEAVWRGSLPYLVIKGEKYFVGALLDDGWMVERIEDGRVMLSRNGRLAAVPY
CEEEEEEEECCCCCEEEEECCEEEEEEEECCCEEEEEECCCEEEEECCCCEEECCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424