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The map label for this gene is rhcS

Identifier: 16520045

GI number: 16520045

Start: 77679

End: 77954

Strand: Reverse

Name: rhcS

Synonym: NGR_a00600

Alternate gene names: NA

Gene position: 77954-77679 (Counterclockwise)

Preceding gene: 16520044

Following gene: 16520046

Centisome position: 14.54

GC content: 52.9

Gene sequence:

>276_bases
ATGACCGGATCCAGTATTGTTAGTCTAATGAGCCAATCATTGGTGGTTTTCATGATCTGGATTCTGCCCCCGCTCATTGC
ATCGGTGATTGTTGGCCTAACCATTGGCATCATCCAGGCAGCAACGCAGATCCAGGATGAAAGCCTGCCACTCACTGTGA
AGCTCCTGGTCGTTGTCGCGGTGATTGGCCTGTTTGCGCCTGTGCTGAGCGCTCCGCTCATCGAGCTCGCGGACCAGATC
TTTACCGAGTTTCCAGCAATGACACTCGGCTATTAG

Upstream 100 bases:

>100_bases
TAGCTGTCCCGTTCAAACTATTCTTGTTCGTCGCTATTGATGGCTGGTCAAGATTGATGCACGGACTTGTGCTCAGTTAT
ACGATGCCGGGAGCTTTATG

Downstream 100 bases:

>100_bases
TCTGCGCTATGTATTTGTCACCTGCCGAGATTCAGATCTTGCTCCATGCGGCTATCGAACTCGTTGCGGCAGCCGGTCTT
GGAGCGGCCCGCGCGCTGGG

Product: inner membrane protein RhcS; component of type III secretion apparatus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MTGSSIVSLMSQSLVVFMIWILPPLIASVIVGLTIGIIQAATQIQDESLPLTVKLLVVVAVIGLFAPVLSAPLIELADQI
FTEFPAMTLGY

Sequences:

>Translated_91_residues
MTGSSIVSLMSQSLVVFMIWILPPLIASVIVGLTIGIIQAATQIQDESLPLTVKLLVVVAVIGLFAPVLSAPLIELADQI
FTEFPAMTLGY
>Mature_90_residues
TGSSIVSLMSQSLVVFMIWILPPLIASVIVGLTIGIIQAATQIQDESLPLTVKLLVVVAVIGLFAPVLSAPLIELADQIF
TEFPAMTLGY

Specific function: Could be involved in the secretion of an unknown factor

COG id: COG4794

COG function: function code U; Type III secretory pathway, component EscS

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4YM_RHISN (P55721)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444165.1
- GeneID:   962528
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00600
- HOGENOM:   HBG729002
- ProtClustDB:   CLSK506581
- InterPro:   IPR002191
- PRINTS:   PR00952

Pfam domain/function: PF01313 Bac_export_3

EC number: NA

Molecular weight: Translated: 9640; Mature: 9509

Theoretical pI: Translated: 3.64; Mature: 3.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbb92b98)-; HASH(0xbbbb924)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSSIVSLMSQSLVVFMIWILPPLIASVIVGLTIGIIQAATQIQDESLPLTVKLLVVVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VIGLFAPVLSAPLIELADQIFTEFPAMTLGY
HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCH
>Mature Secondary Structure 
TGSSIVSLMSQSLVVFMIWILPPLIASVIVGLTIGIIQAATQIQDESLPLTVKLLVVVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VIGLFAPVLSAPLIELADQIFTEFPAMTLGY
HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424