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The map label for this gene is nolU

Identifier: 16520039

GI number: 16520039

Start: 82208

End: 82846

Strand: Reverse

Name: nolU

Synonym: NGR_a00660

Alternate gene names: 16520039

Gene position: 82846-82208 (Counterclockwise)

Preceding gene: 16520038

Following gene: 16520040

Centisome position: 15.45

GC content: 56.81

Gene sequence:

>639_bases
GTGAAATTACCAATGCCGATAGCGATACAGACTACCCAACCTGATGTTTCGTTCCAATCGCACTCCGTTTCCAGGAGCGA
GCTTGCTGCGTCGACCCATCCGACGCGTCTTGCCGCCCGTCTCGATCCGGAGTTGTCGGCTGCGACAGTGGTGCAGTTGC
AGAAGTGTGCGAGGCTTCAGCCACGACTGGCAGAATTGCTGCTTGGCAATGACATGGATTGGAACCGAATCGGATGGGGG
CCCGATCTCCTGCGCGGCCATGATCCTCGTCGCGCTGCTCTTCTTGCCGGAAGTATTTGGCATGCCCGTTCGCTTCTGAA
AGTCGTTTCTCAGCGTGACCTCGCCCGGCTCGTTGAACGTATTGGCGCTGATGCGCACGCATTTGGCATCCGACATCTGG
CGCATGCTATCGCAGACAAATTGATCTCTGATCCGGAAAAACTTGCGTTGCAAATCGAACACGATGGACATGCTTGTCTT
GGTGCTTGGCTCAACATAAGGCCAGCGCTTGAGCGGAATCGCGTGCTTCTACGCTTGCCGCTCGGTACAGCCGCGGAGAA
CCCGGCGCCTGAGCACGATGGTGCCTCAAGCGGGTTGTTTTCGCTCGTGATAGCCCATTTCGAGATGGAGAGCCCGTAA

Upstream 100 bases:

>100_bases
GGCGCAGGCAATTAACTGGCGAACTATCTAGAGTCCAGGAGCGCCCCGGTGTTTCCGCTCTCGCGGCTATTCGTAAAAAG
ATACCGGGGCTAGGGCGTAG

Downstream 100 bases:

>100_bases
TATGACAGCCGACATTTCAGCGGCACCCGTCGCGCCGCAGATGCGCCCATTGGGGCCACTGATACCCGCGAGTGAGCTTA
ATATCTGGCACAGCGCTGGA

Product: nodulation protein NolU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKLPMPIAIQTTQPDVSFQSHSVSRSELAASTHPTRLAARLDPELSAATVVQLQKCARLQPRLAELLLGNDMDWNRIGWG
PDLLRGHDPRRAALLAGSIWHARSLLKVVSQRDLARLVERIGADAHAFGIRHLAHAIADKLISDPEKLALQIEHDGHACL
GAWLNIRPALERNRVLLRLPLGTAAENPAPEHDGASSGLFSLVIAHFEMESP

Sequences:

>Translated_212_residues
MKLPMPIAIQTTQPDVSFQSHSVSRSELAASTHPTRLAARLDPELSAATVVQLQKCARLQPRLAELLLGNDMDWNRIGWG
PDLLRGHDPRRAALLAGSIWHARSLLKVVSQRDLARLVERIGADAHAFGIRHLAHAIADKLISDPEKLALQIEHDGHACL
GAWLNIRPALERNRVLLRLPLGTAAENPAPEHDGASSGLFSLVIAHFEMESP
>Mature_212_residues
MKLPMPIAIQTTQPDVSFQSHSVSRSELAASTHPTRLAARLDPELSAATVVQLQKCARLQPRLAELLLGNDMDWNRIGWG
PDLLRGHDPRRAALLAGSIWHARSLLKVVSQRDLARLVERIGADAHAFGIRHLAHAIADKLISDPEKLALQIEHDGHACL
GAWLNIRPALERNRVLLRLPLGTAAENPAPEHDGASSGLFSLVIAHFEMESP

Specific function: Regulates cultivar-specific nodulation of soybean [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23217; Mature: 23217

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPMPIAIQTTQPDVSFQSHSVSRSELAASTHPTRLAARLDPELSAATVVQLQKCARLQ
CCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCC
PRLAELLLGNDMDWNRIGWGPDLLRGHDPRRAALLAGSIWHARSLLKVVSQRDLARLVER
HHHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGADAHAFGIRHLAHAIADKLISDPEKLALQIEHDGHACLGAWLNIRPALERNRVLLRLP
HCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEHHHHCCCCCCCCCCEEEEEC
LGTAAENPAPEHDGASSGLFSLVIAHFEMESP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLPMPIAIQTTQPDVSFQSHSVSRSELAASTHPTRLAARLDPELSAATVVQLQKCARLQ
CCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCC
PRLAELLLGNDMDWNRIGWGPDLLRGHDPRRAALLAGSIWHARSLLKVVSQRDLARLVER
HHHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGADAHAFGIRHLAHAIADKLISDPEKLALQIEHDGHACLGAWLNIRPALERNRVLLRLP
HCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEHHHHCCCCCCCCCCEEEEEC
LGTAAENPAPEHDGASSGLFSLVIAHFEMESP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412662 [H]