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Identifier: 16520033

GI number: 16520033

Start: 87761

End: 89134

Strand: Direct

Name: Not Available

Synonym: NGR_a00720

Alternate gene names: NA

Gene position: 87761-89134 (Clockwise)

Preceding gene: 16520034

Following gene: 16520032

Centisome position: 16.37

GC content: 63.25

Gene sequence:

>1374_bases
ATGACGCTGCATTGCCAGAAGATCGGCCATGGGCTGCCACCGATTCTGCGATCGGCGACTGCGGACCTTCTCACCAAATA
CGGTCCTCTTCTTTTCGATTGGGCCGCCCGCCACGGCTCCCCGCTCAATCTGGTCTGGCCGGATGCGTTGCGGGAGAATC
TTGCCGCCTTGAAGGGCGTACTGACGGAGCGCCGCCTCGAGCATGCGATCTATTACGGGGCGAAGGCCAACAAATCGCCC
GGGCTCATGCAGGCAGCGCTCAGCGCAGGCGCCGGGCTCGACGTCTCCAGCCTCTACGAGCTTCGCGACGCAAGGCGGCT
TGGGGCCGATGGTGCCAGGCTCGTGGCGACGGGACCGGCGAAGACGAGCGCATTTCATCAAGAGCTGATCAATTGCAACG
CGCTGATATCGGTGGACTCGCCGGAAGAACTGGAGGATCTCATCCACGGTCTGCCGGCAGATGCTGGCCAACAGTCCATC
CTCTTGCGTTTGCGGCCGAGGGACCAAAGCAAGAGCCGCTTCGGCATGCCGCCCGACGCGGTCGTTCATTGCCTCGCTCG
GCTTGCCGGTGAAGGCAGGGTGCGTTTCGACGGGCTGCATTTCCACCTCAGCGGCTATCGCCGGGAGACCCGTGTGGCAG
CGCTCAGAGAGGCCGCCGACCTCATTGCCGAAGCCAGGCGGATGGGATTTTTTCCGGGCATGATCGATATTGGCGGTGGC
CTGCCTATCCAATATGTCGACCGAGCCAGGTACAAAGCGCATCTCGCGGCGCAGGCGCCCGAGGACTACCGCACCGGGAA
AATACCGGACTCTTTCTATCCCTATGGCAGCACTCTTTCAGCAGCCGACTGGCTGCACCGGCTCTTGGAGGCGGAGATGA
ACCAGGGCCGAAGCGTAGCCGGCTACCTGGCGCGTGAGGGTCTCACGCTGGCGATGGAGCCCGGCCGCGCGCTGGCCGAC
CAGGCGGCGATCACTGTCTTTCGAATCTCGCGGGTGAAGGCGCTCGGTCCGGATTCGCACGTCATCTTTGTCGAAGGTAG
CAGCTTCAGCGCCTGCGAAACTTGGTTCGCCTCCGAATTCCTGATCGACCCTATTCTCGTGCCTGCCACCAAGGCGACCG
TTCAATTGCCGCCGGTCCGCGCCTATCTGGCCGGCCATAGCTGCCTCGACGAGGACGTCATCAGCAACCGGTGGCTGACG
TTCCCGACCGCGCCGCGCGCTGGCGACCTGCTCGTATACGCCAACACCGGCGGCTACCAGATGGACCTCCTCGAAAACGA
GTTCCATCGCCATCCCATGCCCGCTCGCTTCTGCGTCATCGAAGACGCCGAAGGGCGGCCCAATCTCGTTCCCGACACAA
TTGGAGAGGTTTAG

Upstream 100 bases:

>100_bases
TTTTTGCCCACGGCTTGCCGACATGCGATGTGCCGCTTGAGCTTTTGAGCAGTCCCACTCCGATGGAGATCGCGCCGGTC
TTTTCCGCGGGGGCGCTGTG

Downstream 100 bases:

>100_bases
ATGCTGCACACGACCGTAACACAATTGATCGGCCAGACGCCGGTCATGTCGATCGACGTGCCGGGCCGCAACGCCACCTT
GGTTCTGAAGATCGAGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MTLHCQKIGHGLPPILRSATADLLTKYGPLLFDWAARHGSPLNLVWPDALRENLAALKGVLTERRLEHAIYYGAKANKSP
GLMQAALSAGAGLDVSSLYELRDARRLGADGARLVATGPAKTSAFHQELINCNALISVDSPEELEDLIHGLPADAGQQSI
LLRLRPRDQSKSRFGMPPDAVVHCLARLAGEGRVRFDGLHFHLSGYRRETRVAALREAADLIAEARRMGFFPGMIDIGGG
LPIQYVDRARYKAHLAAQAPEDYRTGKIPDSFYPYGSTLSAADWLHRLLEAEMNQGRSVAGYLAREGLTLAMEPGRALAD
QAAITVFRISRVKALGPDSHVIFVEGSSFSACETWFASEFLIDPILVPATKATVQLPPVRAYLAGHSCLDEDVISNRWLT
FPTAPRAGDLLVYANTGGYQMDLLENEFHRHPMPARFCVIEDAEGRPNLVPDTIGEV

Sequences:

>Translated_457_residues
MTLHCQKIGHGLPPILRSATADLLTKYGPLLFDWAARHGSPLNLVWPDALRENLAALKGVLTERRLEHAIYYGAKANKSP
GLMQAALSAGAGLDVSSLYELRDARRLGADGARLVATGPAKTSAFHQELINCNALISVDSPEELEDLIHGLPADAGQQSI
LLRLRPRDQSKSRFGMPPDAVVHCLARLAGEGRVRFDGLHFHLSGYRRETRVAALREAADLIAEARRMGFFPGMIDIGGG
LPIQYVDRARYKAHLAAQAPEDYRTGKIPDSFYPYGSTLSAADWLHRLLEAEMNQGRSVAGYLAREGLTLAMEPGRALAD
QAAITVFRISRVKALGPDSHVIFVEGSSFSACETWFASEFLIDPILVPATKATVQLPPVRAYLAGHSCLDEDVISNRWLT
FPTAPRAGDLLVYANTGGYQMDLLENEFHRHPMPARFCVIEDAEGRPNLVPDTIGEV
>Mature_456_residues
TLHCQKIGHGLPPILRSATADLLTKYGPLLFDWAARHGSPLNLVWPDALRENLAALKGVLTERRLEHAIYYGAKANKSPG
LMQAALSAGAGLDVSSLYELRDARRLGADGARLVATGPAKTSAFHQELINCNALISVDSPEELEDLIHGLPADAGQQSIL
LRLRPRDQSKSRFGMPPDAVVHCLARLAGEGRVRFDGLHFHLSGYRRETRVAALREAADLIAEARRMGFFPGMIDIGGGL
PIQYVDRARYKAHLAAQAPEDYRTGKIPDSFYPYGSTLSAADWLHRLLEAEMNQGRSVAGYLAREGLTLAMEPGRALADQ
AAITVFRISRVKALGPDSHVIFVEGSSFSACETWFASEFLIDPILVPATKATVQLPPVRAYLAGHSCLDEDVISNRWLTF
PTAPRAGDLLVYANTGGYQMDLLENEFHRHPMPARFCVIEDAEGRPNLVPDTIGEV

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4YA_RHISN (P55709)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444153.1
- ProteinModelPortal:   P55709
- SMR:   P55709
- GeneID:   962536
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00720
- HOGENOM:   HBG432048
- ProtClustDB:   CLSK809026
- InterPro:   IPR009006
- InterPro:   IPR022643
- InterPro:   IPR022644
- InterPro:   IPR000183
- Gene3D:   G3DSA:2.40.37.10
- PRINTS:   PR01179

Pfam domain/function: PF02784 Orn_Arg_deC_N; PF00278 Orn_DAP_Arg_deC; SSF50621 Racem_decarbox_C

EC number: NA

Molecular weight: Translated: 49946; Mature: 49814

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00879 ODR_DC_2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLHCQKIGHGLPPILRSATADLLTKYGPLLFDWAARHGSPLNLVWPDALRENLAALKGV
CEEEHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHH
LTERRLEHAIYYGAKANKSPGLMQAALSAGAGLDVSSLYELRDARRLGADGARLVATGPA
HHHHHHHHHHEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCC
KTSAFHQELINCNALISVDSPEELEDLIHGLPADAGQQSILLRLRPRDQSKSRFGMPPDA
HHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCHHH
VVHCLARLAGEGRVRFDGLHFHLSGYRRETRVAALREAADLIAEARRMGFFPGMIDIGGG
HHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
LPIQYVDRARYKAHLAAQAPEDYRTGKIPDSFYPYGSTLSAADWLHRLLEAEMNQGRSVA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH
GYLAREGLTLAMEPGRALADQAAITVFRISRVKALGPDSHVIFVEGSSFSACETWFASEF
HHHHHCCCEEEECCCCHHHHHHHEEEHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHH
LIDPILVPATKATVQLPPVRAYLAGHSCLDEDVISNRWLTFPTAPRAGDLLVYANTGGYQ
HHCCEECCCCCCEEECCCHHHHHHCCCHHHHHHHCCCEEECCCCCCCCCEEEEECCCCEE
MDLLENEFHRHPMPARFCVIEDAEGRPNLVPDTIGEV
EHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHCCC
>Mature Secondary Structure 
TLHCQKIGHGLPPILRSATADLLTKYGPLLFDWAARHGSPLNLVWPDALRENLAALKGV
EEEHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHH
LTERRLEHAIYYGAKANKSPGLMQAALSAGAGLDVSSLYELRDARRLGADGARLVATGPA
HHHHHHHHHHEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCC
KTSAFHQELINCNALISVDSPEELEDLIHGLPADAGQQSILLRLRPRDQSKSRFGMPPDA
HHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCHHH
VVHCLARLAGEGRVRFDGLHFHLSGYRRETRVAALREAADLIAEARRMGFFPGMIDIGGG
HHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
LPIQYVDRARYKAHLAAQAPEDYRTGKIPDSFYPYGSTLSAADWLHRLLEAEMNQGRSVA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH
GYLAREGLTLAMEPGRALADQAAITVFRISRVKALGPDSHVIFVEGSSFSACETWFASEF
HHHHHCCCEEEECCCCHHHHHHHEEEHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHH
LIDPILVPATKATVQLPPVRAYLAGHSCLDEDVISNRWLTFPTAPRAGDLLVYANTGGYQ
HHCCEECCCCCCEEECCCHHHHHHCCCHHHHHHHCCCEEECCCCCCCCCEEEEECCCCEE
MDLLENEFHRHPMPARFCVIEDAEGRPNLVPDTIGEV
EHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424