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Identifier: 16520031

GI number: 16520031

Start: 90142

End: 91281

Strand: Direct

Name: Not Available

Synonym: NGR_a00740

Alternate gene names: NA

Gene position: 90142-91281 (Clockwise)

Preceding gene: 16520032

Following gene: 16520030

Centisome position: 16.81

GC content: 62.98

Gene sequence:

>1140_bases
ATGAAGGTGACCATTTGCGGCGCTGGCCGCACCGGACATTTGAATGCGGTCCTTTTCAAGCAGAACCCGGGCATCGATGT
TTCGGTCCTGACCACGTCCGCCACCGTGGCCGCGCGATGGGCGAGCGGGGACGGTCTCTGGCAAGCGGTGACGCGAGACG
GTCGCACCCTGAGTGCTAGGCCCGACTACATCGGAACCGACCCGAGCGCGGCGCTCGACAACGCTGACATGGTCCTCATA
ACGCAACCCGCCCAGGCAAGATCCGCGCTCTTGCATCGTATAGCGCCGTATTTGCCGACGGATAAGAGCGTCTATATCGG
CGCGATTCCCGGCTTTTGCGGCTTCGACTGGCTCGCGGCAAAGGTGCTTTCGGGGCGTGACAATGTGGTGATCTGGGGCA
TGAAGGACGTGCCCCATATCGCCTATGATCTGATTGCAGGCCAGCGCGTGCGGATGGGCGGCGCCAAGGCAGAGCTCTTC
GTTGCCCTGCATCGCCGGGAAAGCGCTGCGAGCGCCGCCGCACTGATGGCGATGTTGAATCACATCTACGAGGCGCCCGT
CAACCTGCTCAAGGACTATCTCGAAATCACGCTGACGCCGGGCAACGCGCTGATGCACCCGGCCGTGCTCTACGCGCTCA
TCGGCCCCGGCGCACCGTGGGAAAAAAGACCGTTCGACGAAGCCCTGTGCTGGTGGAGCGACTGCCCACAAGCAGGCGCC
GAGCTCCTGGAAGCTTGCGATGCGGAAAACCAAGCGATCCGCCGGGCGAGCGAGGCACGTCTCGGCATTGATCTCAGCTC
AGTGAAGCCGCTTCAGCAGGAACTGATCGAGGCCTATGGCGACCAGATTGGGGATGACCGAACCATGTACACGCTTCTAC
GCACAAATCGCGCCTATGCGGGCATTCCTGCCCCCCTCGTTCCCAATCCACATGGCCCGGGGCTCGTCATCGATCGCGGA
AGCCGCGCCTTCCACGAGGATATCGCTTTCGGACAGGCGCTGCTCGTCACGATGGCAGAACGGCTCGAGGCGACGGTACC
GGCGATCGCCAAGATCTATCGCTGGGCGTGCGACTACCACGGCAAATTGGCTGCGGGTACACCAGACTATGTCCCAGCCG
ACTGGCCGGAGGCCGCCTGA

Upstream 100 bases:

>100_bases
GCACGATTTTCGATGAGGAATGGATGGCGAAGCGCCGCCTGCTCGACCCGGCAATCGCTGCCCAGTTGGATGGCTGGCTA
TTCGGAAAGGCGCGGGCAGC

Downstream 100 bases:

>100_bases
TGGACGAGAAGACGCCCTCCGTGACGAATCCCGTCGAGAACGAGGATCTTGCGCTTTTGACGCAGGCATCGCGCAACGCG
ATCAACCGGCTGGTGCGCTG

Product: oxidoreductase; second copy encoded by pNGR234b

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKVTICGAGRTGHLNAVLFKQNPGIDVSVLTTSATVAARWASGDGLWQAVTRDGRTLSARPDYIGTDPSAALDNADMVLI
TQPAQARSALLHRIAPYLPTDKSVYIGAIPGFCGFDWLAAKVLSGRDNVVIWGMKDVPHIAYDLIAGQRVRMGGAKAELF
VALHRRESAASAAALMAMLNHIYEAPVNLLKDYLEITLTPGNALMHPAVLYALIGPGAPWEKRPFDEALCWWSDCPQAGA
ELLEACDAENQAIRRASEARLGIDLSSVKPLQQELIEAYGDQIGDDRTMYTLLRTNRAYAGIPAPLVPNPHGPGLVIDRG
SRAFHEDIAFGQALLVTMAERLEATVPAIAKIYRWACDYHGKLAAGTPDYVPADWPEAA

Sequences:

>Translated_379_residues
MKVTICGAGRTGHLNAVLFKQNPGIDVSVLTTSATVAARWASGDGLWQAVTRDGRTLSARPDYIGTDPSAALDNADMVLI
TQPAQARSALLHRIAPYLPTDKSVYIGAIPGFCGFDWLAAKVLSGRDNVVIWGMKDVPHIAYDLIAGQRVRMGGAKAELF
VALHRRESAASAAALMAMLNHIYEAPVNLLKDYLEITLTPGNALMHPAVLYALIGPGAPWEKRPFDEALCWWSDCPQAGA
ELLEACDAENQAIRRASEARLGIDLSSVKPLQQELIEAYGDQIGDDRTMYTLLRTNRAYAGIPAPLVPNPHGPGLVIDRG
SRAFHEDIAFGQALLVTMAERLEATVPAIAKIYRWACDYHGKLAAGTPDYVPADWPEAA
>Mature_379_residues
MKVTICGAGRTGHLNAVLFKQNPGIDVSVLTTSATVAARWASGDGLWQAVTRDGRTLSARPDYIGTDPSAALDNADMVLI
TQPAQARSALLHRIAPYLPTDKSVYIGAIPGFCGFDWLAAKVLSGRDNVVIWGMKDVPHIAYDLIAGQRVRMGGAKAELF
VALHRRESAASAAALMAMLNHIYEAPVNLLKDYLEITLTPGNALMHPAVLYALIGPGAPWEKRPFDEALCWWSDCPQAGA
ELLEACDAENQAIRRASEARLGIDLSSVKPLQQELIEAYGDQIGDDRTMYTLLRTNRAYAGIPAPLVPNPHGPGLVIDRG
SRAFHEDIAFGQALLVTMAERLEATVPAIAKIYRWACDYHGKLAAGTPDYVPADWPEAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4XO_RHISN (P55707)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444151.1
- ProteinModelPortal:   P55707
- SMR:   P55707
- GeneID:   962509
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00740
- HOGENOM:   HBG361227
- ProtClustDB:   CLSK809024
- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR016040
- InterPro:   IPR003421
- Gene3D:   G3DSA:3.40.50.720
- Gene3D:   G3DSA:1.10.1040.10

Pfam domain/function: PF02317 Octopine_DH; SSF48179 6DGDH_C_like

EC number: NA

Molecular weight: Translated: 40918; Mature: 40918

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTICGAGRTGHLNAVLFKQNPGIDVSVLTTSATVAARWASGDGLWQAVTRDGRTLSAR
CEEEEECCCCCCCEEEEEEECCCCCEEEEEECCEEEEEEECCCCCHHHHHHCCCCEEECC
PDYIGTDPSAALDNADMVLITQPAQARSALLHRIAPYLPTDKSVYIGAIPGFCGFDWLAA
CCCCCCCCCHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHH
KVLSGRDNVVIWGMKDVPHIAYDLIAGQRVRMGGAKAELFVALHRRESAASAAALMAMLN
HHHCCCCCEEEEECCCCCHHHHHHHCCCEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHH
HIYEAPVNLLKDYLEITLTPGNALMHPAVLYALIGPGAPWEKRPFDEALCWWSDCPQAGA
HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHH
ELLEACDAENQAIRRASEARLGIDLSSVKPLQQELIEAYGDQIGDDRTMYTLLRTNRAYA
HHHHHHCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHEEHHHHCCCCCC
GIPAPLVPNPHGPGLVIDRGSRAFHEDIAFGQALLVTMAERLEATVPAIAKIYRWACDYH
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKLAAGTPDYVPADWPEAA
CEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKVTICGAGRTGHLNAVLFKQNPGIDVSVLTTSATVAARWASGDGLWQAVTRDGRTLSAR
CEEEEECCCCCCCEEEEEEECCCCCEEEEEECCEEEEEEECCCCCHHHHHHCCCCEEECC
PDYIGTDPSAALDNADMVLITQPAQARSALLHRIAPYLPTDKSVYIGAIPGFCGFDWLAA
CCCCCCCCCHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHH
KVLSGRDNVVIWGMKDVPHIAYDLIAGQRVRMGGAKAELFVALHRRESAASAAALMAMLN
HHHCCCCCEEEEECCCCCHHHHHHHCCCEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHH
HIYEAPVNLLKDYLEITLTPGNALMHPAVLYALIGPGAPWEKRPFDEALCWWSDCPQAGA
HHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHH
ELLEACDAENQAIRRASEARLGIDLSSVKPLQQELIEAYGDQIGDDRTMYTLLRTNRAYA
HHHHHHCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCHHEEHHHHCCCCCC
GIPAPLVPNPHGPGLVIDRGSRAFHEDIAFGQALLVTMAERLEATVPAIAKIYRWACDYH
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GKLAAGTPDYVPADWPEAA
CEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424