Definition Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession NC_000914
Length 536,165

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The map label for this gene is Not Available

Identifier: 16520014

GI number: 16520014

Start: 110943

End: 111263

Strand: Direct

Name: Not Available

Synonym: NGR_a00910

Alternate gene names: NA

Gene position: 110943-111263 (Clockwise)

Preceding gene: 16520024

Following gene: 16520013

Centisome position: 20.69

GC content: 60.75

Gene sequence:

>321_bases
GTGGCAGTCCCGTCGTGCCAGACCGATGGTGTTCGCGCACTCAAATTCGTGGATCACGTCGGCGGCGAAGAGCTTGGCGA
TAATGTCAGAGGCGTCGTCCTAATCGCCTGCACTACCATCAGTATGTCGCCGTGGCCGGTTACCGGGATGGCGGGGCTGG
TCGGGTCGAGAACAGTAAGCACCTCGGGCGTCAGGATCTGCGGTTTAACGGCAACTGGCACGGTCATTGCTCATCAGCTT
CACATGACAGTCGCCGCTGTCGGTTTTCGGAGAATCGGCTTGGCAGGCGACCGGGCGCGCCCCATATGGAGGATCTCCTG
A

Upstream 100 bases:

>100_bases
AAGATGTCTCGGCGGTCATTTGATGGAGGCAAATAACATTTCTTGCCGGCCAAGGTTTGCCTTGAGACAAAGGTGAGAAT
TATGGACAGAAGGCGGTGAG

Downstream 100 bases:

>100_bases
TGACCATTGAGCATTCCGCGGAGACCCGCGCCAAGCCACCCTTATATCGCCATCTCTATGCCCAGGTTCTGGCAGCGATC
GCGGGCATCCTGTTTGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MAVPSCQTDGVRALKFVDHVGGEELGDNVRGVVLIACTTISMSPWPVTGMAGLVGSRTVSTSGVRICGLTATGTVIAHQL
HMTVAAVGFRRIGLAGDRARPIWRIS

Sequences:

>Translated_106_residues
MAVPSCQTDGVRALKFVDHVGGEELGDNVRGVVLIACTTISMSPWPVTGMAGLVGSRTVSTSGVRICGLTATGTVIAHQL
HMTVAAVGFRRIGLAGDRARPIWRIS
>Mature_105_residues
AVPSCQTDGVRALKFVDHVGGEELGDNVRGVVLIACTTISMSPWPVTGMAGLVGSRTVSTSGVRICGLTATGTVIAHQLH
MTVAAVGFRRIGLAGDRARPIWRIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4WO_RHISN (P55693)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444134.1
- GeneID:   962246
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00910

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11044; Mature: 10913

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPSCQTDGVRALKFVDHVGGEELGDNVRGVVLIACTTISMSPWPVTGMAGLVGSRTVS
CCCCCCCCCCHHHHHHHHHCCCHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEC
TSGVRICGLTATGTVIAHQLHMTVAAVGFRRIGLAGDRARPIWRIS
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC
>Mature Secondary Structure 
AVPSCQTDGVRALKFVDHVGGEELGDNVRGVVLIACTTISMSPWPVTGMAGLVGSRTVS
CCCCCCCCCHHHHHHHHHCCCHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEC
TSGVRICGLTATGTVIAHQLHMTVAAVGFRRIGLAGDRARPIWRIS
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424