Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16520007

GI number: 16520007

Start: 120662

End: 121207

Strand: Reverse

Name: Not Available

Synonym: NGR_a00980

Alternate gene names: NA

Gene position: 121207-120662 (Counterclockwise)

Preceding gene: 16520006

Following gene: 16520008

Centisome position: 22.61

GC content: 49.82

Gene sequence:

>546_bases
GTGACGGCTTCCTGTCGTATCAGGCGCAACTCCAATTCGGCCCAAAAATCAACAATGGGCTGGTCGGCGCTAAGTACATC
TGACTCGAAGGTGTTTTATCGGGTAGCGTGGCTTCTGGGAAGAGGTAAGATGGCCGAGATCGACGCAATATTGATAACAG
ACGTAAACGGAATAGGAACGACCGCGGATGATCAACTAGCATTTGTCAGTTTGATTGCTGATCAAGGGGAAACTACCACA
GTAGCATTCGGTCCAGAAATTGGCAGCAGAATAGCTGCTTCGTTCATGGCCGCATGCGGACAGCTCCAACATCAAATCGC
TACGAGAACGGGGAAGGAGGAAAGAAAGTTCAAGCCCTTTGCTGCAGCCGGATTCAGCGTCAGAGCTGGTCTGGCCGCCG
ATGGCTCCAATTCGGGAATGTTATCAATTTCAACCGTAGCGGGCGCTGAGGTTCACTTTATAGCAACGGAACGTTCTCTT
CGAGAACTCGAAAACCAATTAACGTTATTGCTCGAACAATTGCGGTTACGTTCGCGACCGAATTAA

Upstream 100 bases:

>100_bases
TTGGATGCTTCGCTGTATACCGCAATGACCATTCAATCGGAACTAATGGATCGAGTTGGCTGAGTGCCATGGCGCCTGAC
GAAGTCAGGCGTGTGTAAAA

Downstream 100 bases:

>100_bases
TGCGATTGTAGCGGTAACAAAGCTCTTATGACTATCATGGCTAGCAAGGCCTGGCAGTAATGGATATCACCCATTTGGGT
AGAATTCACGCGGGCAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTASCRIRRNSNSAQKSTMGWSALSTSDSKVFYRVAWLLGRGKMAEIDAILITDVNGIGTTADDQLAFVSLIADQGETTT
VAFGPEIGSRIAASFMAACGQLQHQIATRTGKEERKFKPFAAAGFSVRAGLAADGSNSGMLSISTVAGAEVHFIATERSL
RELENQLTLLLEQLRLRSRPN

Sequences:

>Translated_181_residues
MTASCRIRRNSNSAQKSTMGWSALSTSDSKVFYRVAWLLGRGKMAEIDAILITDVNGIGTTADDQLAFVSLIADQGETTT
VAFGPEIGSRIAASFMAACGQLQHQIATRTGKEERKFKPFAAAGFSVRAGLAADGSNSGMLSISTVAGAEVHFIATERSL
RELENQLTLLLEQLRLRSRPN
>Mature_180_residues
TASCRIRRNSNSAQKSTMGWSALSTSDSKVFYRVAWLLGRGKMAEIDAILITDVNGIGTTADDQLAFVSLIADQGETTTV
AFGPEIGSRIAASFMAACGQLQHQIATRTGKEERKFKPFAAAGFSVRAGLAADGSNSGMLSISTVAGAEVHFIATERSLR
ELENQLTLLLEQLRLRSRPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4WG_RHISN (P55685)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444127.1
- GeneID:   962290
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00980

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19427; Mature: 19296

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASCRIRRNSNSAQKSTMGWSALSTSDSKVFYRVAWLLGRGKMAEIDAILITDVNGIGT
CCCCEEEEECCCCCHHHHCCCCEECCCCCHHHHHHHHHHCCCCEEEEEEEEEEECCCCCC
TADDQLAFVSLIADQGETTTVAFGPEIGSRIAASFMAACGQLQHQIATRTGKEERKFKPF
CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCH
AAAGFSVRAGLAADGSNSGMLSISTVAGAEVHFIATERSLRELENQLTLLLEQLRLRSRP
HHCCCEEECCEECCCCCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCC
N
C
>Mature Secondary Structure 
TASCRIRRNSNSAQKSTMGWSALSTSDSKVFYRVAWLLGRGKMAEIDAILITDVNGIGT
CCCEEEEECCCCCHHHHCCCCEECCCCCHHHHHHHHHHCCCCEEEEEEEEEEECCCCCC
TADDQLAFVSLIADQGETTTVAFGPEIGSRIAASFMAACGQLQHQIATRTGKEERKFKPF
CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCH
AAAGFSVRAGLAADGSNSGMLSISTVAGAEVHFIATERSLRELENQLTLLLEQLRLRSRP
HHCCCEEECCEECCCCCCCEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424