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Identifier: 16519984

GI number: 16519984

Start: 150461

End: 150781

Strand: Direct

Name: Not Available

Synonym: NGR_a01210

Alternate gene names: 16519984

Gene position: 150461-150781 (Clockwise)

Preceding gene: 16519985

Following gene: 16519983

Centisome position: 28.06

GC content: 58.26

Gene sequence:

>321_bases
ATGATAACGCTCACCGACAGTGCGATTGCCGCAATAAAGTTCGCGCTTTCACAGACTTGCGAGCCGGCGGATGGGCTACG
CATCAAAGTGGAAGCGGGCGGCTGCTCGGGTTTTAAATACCACCTGGGCTTGGACAGCGAGTCGCGCGACGGCGACGCTG
TCATTGAGGCGGGTGGGGTCAAGGTGTACGTAGACTCAGCCTCTCAACCTCATGTCAGCGGCATGACCGTGGACTTCACC
ACGGGTGTCGATTCCGCCGGATTCATCTTTGATAACCCCAACGCACGAGAGAACTGCGCCTGCGGGAAGTCTTTCGGCTG
A

Upstream 100 bases:

>100_bases
CATGGCCGTGTTTGAACAACGCGTTGTTTTCGTGATGGTTTCTGGTTGGCACACTAGGTGCATCGTTCGCAAGCGACTCG
AAACCAGGAGAAACGAACCC

Downstream 100 bases:

>100_bases
TCGCAGAAACAGAGGGGAACGAGAATGCTAGGTCATCCACGAGAAGGATCAGCAAGACACTTCATGCTGTCGCTTTCCGC
GCACAAGTGCCATGGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MITLTDSAIAAIKFALSQTCEPADGLRIKVEAGGCSGFKYHLGLDSESRDGDAVIEAGGVKVYVDSASQPHVSGMTVDFT
TGVDSAGFIFDNPNARENCACGKSFG

Sequences:

>Translated_106_residues
MITLTDSAIAAIKFALSQTCEPADGLRIKVEAGGCSGFKYHLGLDSESRDGDAVIEAGGVKVYVDSASQPHVSGMTVDFT
TGVDSAGFIFDNPNARENCACGKSFG
>Mature_106_residues
MITLTDSAIAAIKFALSQTCEPADGLRIKVEAGGCSGFKYHLGLDSESRDGDAVIEAGGVKVYVDSASQPHVSGMTVDFT
TGVDSAGFIFDNPNARENCACGKSFG

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family

Homologues:

Organism=Homo sapiens, GI160420328, Length=106, Percent_Identity=41.5094339622642, Blast_Score=81, Evalue=2e-16,
Organism=Homo sapiens, GI52426768, Length=105, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786351, Length=104, Percent_Identity=38.4615384615385, Blast_Score=84, Evalue=2e-18,
Organism=Escherichia coli, GI1788877, Length=104, Percent_Identity=41.3461538461538, Blast_Score=72, Evalue=1e-14,
Organism=Escherichia coli, GI1787974, Length=106, Percent_Identity=35.8490566037736, Blast_Score=64, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25146411, Length=104, Percent_Identity=34.6153846153846, Blast_Score=76, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193209025, Length=104, Percent_Identity=34.6153846153846, Blast_Score=76, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=36.1111111111111, Blast_Score=66, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6323001, Length=105, Percent_Identity=35.2380952380952, Blast_Score=68, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24642263, Length=104, Percent_Identity=36.5384615384615, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24649697, Length=91, Percent_Identity=39.5604395604396, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4VC_RHISN (Q53211)

Other databases:

- EMBL:   Z68203
- EMBL:   U00090
- RefSeq:   NP_444104.1
- ProteinModelPortal:   Q53211
- SMR:   Q53211
- GeneID:   962157
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01210
- HOGENOM:   HBG730174
- ProtClustDB:   CLSK506514
- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870
- Gene3D:   G3DSA:2.60.300.12
- PANTHER:   PTHR10072
- TIGRFAMs:   TIGR00049

Pfam domain/function: PF01521 Fe-S_biosyn; SSF89360 HesB_yadR_yfhF-like

EC number: NA

Molecular weight: Translated: 10967; Mature: 10967

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLTDSAIAAIKFALSQTCEPADGLRIKVEAGGCSGFKYHLGLDSESRDGDAVIEAGGV
CEEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCE
KVYVDSASQPHVSGMTVDFTTGVDSAGFIFDNPNARENCACGKSFG
EEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MITLTDSAIAAIKFALSQTCEPADGLRIKVEAGGCSGFKYHLGLDSESRDGDAVIEAGGV
CEEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCEEEEECCE
KVYVDSASQPHVSGMTVDFTTGVDSAGFIFDNPNARENCACGKSFG
EEEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424