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The map label for this gene is fixU

Identifier: 16519975

GI number: 16519975

Start: 158987

End: 159217

Strand: Direct

Name: fixU

Synonym: NGR_a01300

Alternate gene names: 16519975

Gene position: 158987-159217 (Clockwise)

Preceding gene: 16519976

Following gene: 16519974

Centisome position: 29.65

GC content: 54.55

Gene sequence:

>231_bases
ATGAGGGTAACGATCCGCAGAAGCGGCAGCGGCTTGTCAGCGTATGTTCCCAAGAAAGATATCGAAGAGCCGATTGTCAA
GGTTGAGAATGAAAGCCTGTGGGGCGGCTTTGTGGTGCTCAGAAATGGCTGGCGGCTCTTACTGCCCGACCTTCCGGAAG
ACACCAGCCTACCCGTAACCGTGGAGGCAAGGAAGATCGTGAATGATGCCGCGCGAAAAGAAACCTCATGA

Upstream 100 bases:

>100_bases
TCGTCGTTGGAATGCGTACGCGTGAACTGAGGAGCCTCGGGGGGACCTCAACGCCAAAAACCACTGAATGCGCCAGGGGT
GTCAACGAAGGAAAAGCCAG

Downstream 100 bases:

>100_bases
ATACAACACTGGCTTCCGAGCCAGCCAAACGTGGGTTGACCCGGCGTGGATGAACCTGTGCCCTCGAATGCCTCCAACAG
CACTGTTGCCTCCGATCTGC

Product: nitrogen fixation protein FixU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MRVTIRRSGSGLSAYVPKKDIEEPIVKVENESLWGGFVVLRNGWRLLLPDLPEDTSLPVTVEARKIVNDAARKETS

Sequences:

>Translated_76_residues
MRVTIRRSGSGLSAYVPKKDIEEPIVKVENESLWGGFVVLRNGWRLLLPDLPEDTSLPVTVEARKIVNDAARKETS
>Mature_76_residues
MRVTIRRSGSGLSAYVPKKDIEEPIVKVENESLWGGFVVLRNGWRLLLPDLPEDTSLPVTVEARKIVNDAARKETS

Specific function: Unknown

COG id: COG5554

COG function: function code Q; Nitrogen fixation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.leguminosarum Sym plasmid fixU. Also to the N- terminal of R.meliloti mosB protein

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FIXU_RHISN (Q53202)

Other databases:

- EMBL:   Z68203
- EMBL:   U00090
- RefSeq:   NP_444095.1
- ProteinModelPortal:   Q53202
- SMR:   Q53202
- GeneID:   962475
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01300
- HOGENOM:   HBG295230
- InterPro:   IPR009727
- TIGRFAMs:   TIGR02934

Pfam domain/function: PF06988 NifT

EC number: NA

Molecular weight: Translated: 8505; Mature: 8505

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTIRRSGSGLSAYVPKKDIEEPIVKVENESLWGGFVVLRNGWRLLLPDLPEDTSLPVT
CEEEEEECCCCCEEECCCCCCCCCCEEECCCCCCCEEEEEECCCEEECCCCCCCCCCCEE
VEARKIVNDAARKETS
EHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVTIRRSGSGLSAYVPKKDIEEPIVKVENESLWGGFVVLRNGWRLLLPDLPEDTSLPVT
CEEEEEECCCCCEEECCCCCCCCCCEEECCCCCCCEEEEEECCCEEECCCCCCCCCCCEE
VEARKIVNDAARKETS
EHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424