Definition Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession NC_000914
Length 536,165

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The map label for this gene is Not Available

Identifier: 16519960

GI number: 16519960

Start: 177918

End: 178442

Strand: Reverse

Name: Not Available

Synonym: NGR_a01450

Alternate gene names: NA

Gene position: 178442-177918 (Counterclockwise)

Preceding gene: 16519959

Following gene: 16519961

Centisome position: 33.28

GC content: 52.95

Gene sequence:

>525_bases
ATGAGCACTTCAACGCGACGTGTAGTCCGATTTCGACTTTCGTTTGCGTCGCAGCCGTCGCCTGTATGCGTTTTTTTTGG
ACTCAATTCTCAACTGCTTTGGCAAGCGGCGCCGTGTCACGTGTCCTTCCATCTGATCTGCGCGTCCAACAACGAGCTCA
GAACTAAATCGCGGCCGCGACTTCTGCAGGACGAAAAAAGGGCGGTCTGGCGGCGCTTGCGACAGTTTTGCCCAGTCGTT
TTTCCTCGGATTGCACAATCGATGAACGCGCTCGCCCTCCGGGGCGCAACTAGAGAAGGAAGCGCCTTGGCCTTTTTCGG
TCAACTCGCCAAATATCTGAACAGGATTGGAAAGCGTGCGGAAAAATCGAAGCCCTCCGATTGGGAAAAGTATGACGTAA
AATATCCGAATAAGCCGCATTCGGTCAGAAGCGTCACCTTAAATGCAGGATTTCGTCGCAGCGGAAATCATTCTGCCGGA
AATGTGCACCCTGCGTCGCCTATGATCAAAGTGCAAGGTGGCTAG

Upstream 100 bases:

>100_bases
CGCAGTCTTTCGTTGTAACAGCAACGGGTCACGAACCCCTTACGGCTACGCCTCGGGAACTGGTCGTTAAAGACTGACGC
CAGATGGGCCCGCCGAGGCT

Downstream 100 bases:

>100_bases
CGGCTCGAGCGTGAGGGACGCGCCAGACCAGCGTTTCAACGCAGTAACAACTAAAAAGTGGGAACCAAAGCGATGACAAT
TTCTCGGCGTGATCTCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSTSTRRVVRFRLSFASQPSPVCVFFGLNSQLLWQAAPCHVSFHLICASNNELRTKSRPRLLQDEKRAVWRRLRQFCPVV
FPRIAQSMNALALRGATREGSALAFFGQLAKYLNRIGKRAEKSKPSDWEKYDVKYPNKPHSVRSVTLNAGFRRSGNHSAG
NVHPASPMIKVQGG

Sequences:

>Translated_174_residues
MSTSTRRVVRFRLSFASQPSPVCVFFGLNSQLLWQAAPCHVSFHLICASNNELRTKSRPRLLQDEKRAVWRRLRQFCPVV
FPRIAQSMNALALRGATREGSALAFFGQLAKYLNRIGKRAEKSKPSDWEKYDVKYPNKPHSVRSVTLNAGFRRSGNHSAG
NVHPASPMIKVQGG
>Mature_173_residues
STSTRRVVRFRLSFASQPSPVCVFFGLNSQLLWQAAPCHVSFHLICASNNELRTKSRPRLLQDEKRAVWRRLRQFCPVVF
PRIAQSMNALALRGATREGSALAFFGQLAKYLNRIGKRAEKSKPSDWEKYDVKYPNKPHSVRSVTLNAGFRRSGNHSAGN
VHPASPMIKVQGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4TN_RHISN (P55668)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444080.1
- GeneID:   962230
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01450

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19610; Mature: 19479

Theoretical pI: Translated: 11.90; Mature: 11.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSTRRVVRFRLSFASQPSPVCVFFGLNSQLLWQAAPCHVSFHLICASNNELRTKSRPR
CCCCHHHHHHEEEHHCCCCCCEEEEEECCCEEEEEECCCEEEEEEEEECCCCCCCCCCCC
LLQDEKRAVWRRLRQFCPVVFPRIAQSMNALALRGATREGSALAFFGQLAKYLNRIGKRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
EKSKPSDWEKYDVKYPNKPHSVRSVTLNAGFRRSGNHSAGNVHPASPMIKVQGG
HCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
STSTRRVVRFRLSFASQPSPVCVFFGLNSQLLWQAAPCHVSFHLICASNNELRTKSRPR
CCCHHHHHHEEEHHCCCCCCEEEEEECCCEEEEEECCCEEEEEEEEECCCCCCCCCCCC
LLQDEKRAVWRRLRQFCPVVFPRIAQSMNALALRGATREGSALAFFGQLAKYLNRIGKRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
EKSKPSDWEKYDVKYPNKPHSVRSVTLNAGFRRSGNHSAGNVHPASPMIKVQGG
HCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424