Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16519946

GI number: 16519946

Start: 196197

End: 196574

Strand: Reverse

Name: Not Available

Synonym: NGR_a01590

Alternate gene names: NA

Gene position: 196574-196197 (Counterclockwise)

Preceding gene: 16519945

Following gene: 16519950

Centisome position: 36.66

GC content: 63.49

Gene sequence:

>378_bases
ATGGATTGCGATGGGCTTCGGGACGATCAATGGGAACGTATCAGAGGTTTTGTGCCCGGGGGCACGAAGGGCAAGCGTGG
CCCGCGCACGAACAACCGGCTGTTTCTGGATGCGCTGCTGTGGATGGCCCGTTCGGGCGGCCGCTGGCGAGACCTGCCAG
AACGACTGGGTGACTACCGCGCCGTAAAACGACGCTATTACCGCTGGATCGAGATGGGCGTGCTCGACGAGATGCTTGCC
GTGCTTGCCCGCGAAGCTGATTTGGAATGGTTGATGATCGATTCGACTATCGTGCGCGCCCATCAGCATGCGGCCGGGGC
GCGCAGGGCTAAAGGGGGGCGGATGCCCAGGGCTTGGGTCGGTCTCGAGGCGGGCTGA

Upstream 100 bases:

>100_bases
GCTCAGCAATCGAAGGCACTAGGTCGTGGTGACGATTTAACGGATTGAGATTCCCAAGAAGGGGCAAATCAGATTCAACA
CTGACTTTTGGAGGTCAGTG

Downstream 100 bases:

>100_bases
GCACCAAAATCCATGCTGCCGGCGATGCGCTCGGCCTGCCGCTTCGCCTCATCGGCACGGCGGGACAGCGCAACGACATC
ACAGCCGCCCATGATCTCGT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MDCDGLRDDQWERIRGFVPGGTKGKRGPRTNNRLFLDALLWMARSGGRWRDLPERLGDYRAVKRRYYRWIEMGVLDEMLA
VLAREADLEWLMIDSTIVRAHQHAAGARRAKGGRMPRAWVGLEAG

Sequences:

>Translated_125_residues
MDCDGLRDDQWERIRGFVPGGTKGKRGPRTNNRLFLDALLWMARSGGRWRDLPERLGDYRAVKRRYYRWIEMGVLDEMLA
VLAREADLEWLMIDSTIVRAHQHAAGARRAKGGRMPRAWVGLEAG
>Mature_125_residues
MDCDGLRDDQWERIRGFVPGGTKGKRGPRTNNRLFLDALLWMARSGGRWRDLPERLGDYRAVKRRYYRWIEMGVLDEMLA
VLAREADLEWLMIDSTIVRAHQHAAGARRAKGGRMPRAWVGLEAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To transposase of insertion sequence IS6501

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4SN_RHISN (P50358)

Other databases:

- EMBL:   U00090
- EMBL:   X74314
- PIR:   S35957
- RefSeq:   NP_444066.1
- RefSeq:   YP_002823938.1
- GeneID:   7789057
- GeneID:   962223
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01590
- HOGENOM:   HBG758940
- ProtClustDB:   CLSK893870
- GO:   GO:0032196

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14424; Mature: 14424

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCDGLRDDQWERIRGFVPGGTKGKRGPRTNNRLFLDALLWMARSGGRWRDLPERLGDYR
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
AVKRRYYRWIEMGVLDEMLAVLAREADLEWLMIDSTIVRAHQHAAGARRAKGGRMPRAWV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEE
GLEAG
CCCCC
>Mature Secondary Structure
MDCDGLRDDQWERIRGFVPGGTKGKRGPRTNNRLFLDALLWMARSGGRWRDLPERLGDYR
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
AVKRRYYRWIEMGVLDEMLAVLAREADLEWLMIDSTIVRAHQHAAGARRAKGGRMPRAWV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEE
GLEAG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424; 8190622