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Identifier: 16519945

GI number: 16519945

Start: 196779

End: 197162

Strand: Reverse

Name: Not Available

Synonym: NGR_a01600

Alternate gene names: 16519945

Gene position: 197162-196779 (Counterclockwise)

Preceding gene: 16519941

Following gene: 16519946

Centisome position: 36.77

GC content: 55.73

Gene sequence:

>384_bases
GTGGAAGTTGGGCTTTCGCCGTCAGCCTGCCTGAGGCGTATCAAGCTTATGGAGCAGGCAGGTGTCATCAGGGGCTATAC
GGCGCTTGTCGATCCGACGCAGTCGGAATCGACCATAGCCGTCATCATCAACATTACGCTGGAGCGGCAGACGGAGGAGT
ACCTCGACAAGTTTGAAGCGGCCGTGCGCAAGCACCCCGAAATTAGGGAGTGCTATCTAATGACCGGCGGATCAGACTAC
ATGCTGAGGGTGGACGTCGAGAATGCCGGGGCATTCGAGCGCATACACAAAGAGGTCCTGTCGACGTTGCCTGGGGTGCT
GCGTATCCATTCGAGCTTCTCGATTAGAAATGTGTTAGCGGGCCGTCTGAAAGCAAAAAGATGA

Upstream 100 bases:

>100_bases
AGCGCGTTGGTGAACTTGAAGCAGTCGCCGGTCTCGTCCTTCGGCGTCAGCAGCCCACCGACGATCTTGTCGCGCGCGGG
TCAGCAACGCGAAGCTCGCC

Downstream 100 bases:

>100_bases
AACTTGCCCATTTGAGAGATTGCGCGGCAGTGAGGTAGGCTGTGTACCTCATATGACCGCTGCCCCTCAAGATCCGCAGG
GGCTACAGGCCACAGAAGAT

Product: AsnC-type transcription regulator

Products: NA

Alternate protein names: ORF-1

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MEVGLSPSACLRRIKLMEQAGVIRGYTALVDPTQSESTIAVIINITLERQTEEYLDKFEAAVRKHPEIRECYLMTGGSDY
MLRVDVENAGAFERIHKEVLSTLPGVLRIHSSFSIRNVLAGRLKAKR

Sequences:

>Translated_127_residues
MEVGLSPSACLRRIKLMEQAGVIRGYTALVDPTQSESTIAVIINITLERQTEEYLDKFEAAVRKHPEIRECYLMTGGSDY
MLRVDVENAGAFERIHKEVLSTLPGVLRIHSSFSIRNVLAGRLKAKR
>Mature_127_residues
MEVGLSPSACLRRIKLMEQAGVIRGYTALVDPTQSESTIAVIINITLERQTEEYLDKFEAAVRKHPEIRECYLMTGGSDY
MLRVDVENAGAFERIHKEVLSTLPGVLRIHSSFSIRNVLAGRLKAKR

Specific function: Not known, symbiotically active

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI1787116, Length=104, Percent_Identity=41.3461538461538, Blast_Score=96, Evalue=9e-22,
Organism=Escherichia coli, GI87081742, Length=116, Percent_Identity=26.7241379310345, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4SM_RHISN (P50337)

Other databases:

- EMBL:   X74314
- EMBL:   U00090
- PIR:   S43966
- RefSeq:   NP_444065.1
- ProteinModelPortal:   P50337
- SMR:   P50337
- GeneID:   962227
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01600
- HOGENOM:   HBG740878
- GO:   GO:0005622
- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00344

Pfam domain/function: PF01037 AsnC_trans_reg; SSF54909 Dimer_A_B_barrel

EC number: NA

Molecular weight: Translated: 14276; Mature: 14276

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS00519 HTH_ASNC_1; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVGLSPSACLRRIKLMEQAGVIRGYTALVDPTQSESTIAVIINITLERQTEEYLDKFEA
CCCCCCHHHHHHHHHHHHHCCCCCCHHEEECCCCCCCEEEEEEEEEECCCHHHHHHHHHH
AVRKHPEIRECYLMTGGSDYMLRVDVENAGAFERIHKEVLSTLPGVLRIHSSFSIRNVLA
HHHCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCHHHEEHHCCCHHHHHHH
GRLKAKR
HHHHCCC
>Mature Secondary Structure
MEVGLSPSACLRRIKLMEQAGVIRGYTALVDPTQSESTIAVIINITLERQTEEYLDKFEA
CCCCCCHHHHHHHHHHHHHCCCCCCHHEEECCCCCCCEEEEEEEEEECCCHHHHHHHHHH
AVRKHPEIRECYLMTGGSDYMLRVDVENAGAFERIHKEVLSTLPGVLRIHSSFSIRNVLA
HHHCCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCHHHEEHHCCCHHHHHHH
GRLKAKR
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8190622; 9163424