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Identifier: 16519920

GI number: 16519920

Start: 234124

End: 235068

Strand: Reverse

Name: Not Available

Synonym: NGR_a01850

Alternate gene names: 16519920

Gene position: 235068-234124 (Counterclockwise)

Preceding gene: 16519919

Following gene: 16519921

Centisome position: 43.84

GC content: 60.11

Gene sequence:

>945_bases
ATGAGCACATTCCGACAGGCTGTTCAGGAGTACATCGAGATGCGGCGAGGGCTGGGGTTCAAGCTGCGAGAGACAGAACG
GGGATTGATCGATTTCGCCGCCTTCCTGGAGGCCAACGACACGCCACACATCACGACGGAACTGGCCCTTGCCTGGGCTC
AGCGACCGTCGCGGGCGCAGCCTTCGCATTGGGCGACACGGCTGGGCTATGTCCGCGTATTCGCCCGTTATCGGGCCGCC
GCCGATCCGCGAACTCAGATTCCTCCAAGCGGCTTGCTTCCCTTTCGCCCGAAGCGGGCTCGACCATATCTCTATTCGAA
GGAAGACATCCAACGCCTCCTGTCGGCCGCTCTGGAGATGCCGTGTCGATATACCCGCTGCAAGCTCAGGCCATGGACAT
ATTATTGCCTGTTCGGGCTGCTGAGCGTTTCCGGCTTGCGGCTCGGCGAGGCGCGCAACCTCAAGCTCGCGGACGTTGAT
TTCGACGCTGCGGTGTTGACGATCCGCGGAACGAAGTTCGGAAAGTCCCGTCTTGTACCGATGCACGCATCGACATGCGC
AGTGCTCCGCGATTATCTCAAACGCCGACGACAGCATTGTGCAGCCCAGGCGGCATCTCCCTATTTATTCACTTCGCAAC
TGGGCAATCGCCTTGATGTCGGAGACATTCACCGAACATTCTATGCTCTGTCTCGCCAAATCGGCCTGCGCGGCGCAACT
GACAGCCACGGTCCGCGGCTGCATGACATGCGGCATGTGTTCGCCACGAACACGCTGGTGCGCTGGTACGAAGCCGAGCA
AGATCCCGAGCGGCTCCTGCCCATTCTGTCCACCTATCTCGGTCATGTCCACGTGGCCGATACCCAATGGTACCTCACCG
GTTCACCCGAGCTGATGAAAGAAGCAATGCGCCGCCTTGAACGTCGCTGGGAGGATCGGACATGA

Upstream 100 bases:

>100_bases
AAGTCCTGGGACACCGTCATGTGCAGACAACGGCAATTTACGCCAAGGTCGATCTCGACGCGTTGCGAACACTGGCTTTG
CCATGGCCGGGAGAAGCCCA

Downstream 100 bases:

>100_bases
CCAAGCACGCCAGCCTCGCGCCACTCTTGGAGAGCTTTTTCCTCCAACGCCTGATGCAACAGCGGCAGGCAAGCCCCCAT
ACGATCAGTTCCTATCGCGA

Product: DNA integration/recombination/inversion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSTFRQAVQEYIEMRRGLGFKLRETERGLIDFAAFLEANDTPHITTELALAWAQRPSRAQPSHWATRLGYVRVFARYRAA
ADPRTQIPPSGLLPFRPKRARPYLYSKEDIQRLLSAALEMPCRYTRCKLRPWTYYCLFGLLSVSGLRLGEARNLKLADVD
FDAAVLTIRGTKFGKSRLVPMHASTCAVLRDYLKRRRQHCAAQAASPYLFTSQLGNRLDVGDIHRTFYALSRQIGLRGAT
DSHGPRLHDMRHVFATNTLVRWYEAEQDPERLLPILSTYLGHVHVADTQWYLTGSPELMKEAMRRLERRWEDRT

Sequences:

>Translated_314_residues
MSTFRQAVQEYIEMRRGLGFKLRETERGLIDFAAFLEANDTPHITTELALAWAQRPSRAQPSHWATRLGYVRVFARYRAA
ADPRTQIPPSGLLPFRPKRARPYLYSKEDIQRLLSAALEMPCRYTRCKLRPWTYYCLFGLLSVSGLRLGEARNLKLADVD
FDAAVLTIRGTKFGKSRLVPMHASTCAVLRDYLKRRRQHCAAQAASPYLFTSQLGNRLDVGDIHRTFYALSRQIGLRGAT
DSHGPRLHDMRHVFATNTLVRWYEAEQDPERLLPILSTYLGHVHVADTQWYLTGSPELMKEAMRRLERRWEDRT
>Mature_313_residues
STFRQAVQEYIEMRRGLGFKLRETERGLIDFAAFLEANDTPHITTELALAWAQRPSRAQPSHWATRLGYVRVFARYRAAA
DPRTQIPPSGLLPFRPKRARPYLYSKEDIQRLLSAALEMPCRYTRCKLRPWTYYCLFGLLSVSGLRLGEARNLKLADVDF
DAAVLTIRGTKFGKSRLVPMHASTCAVLRDYLKRRRQHCAAQAASPYLFTSQLGNRLDVGDIHRTFYALSRQIGLRGATD
SHGPRLHDMRHVFATNTLVRWYEAEQDPERLLPILSTYLGHVHVADTQWYLTGSPELMKEAMRRLERRWEDRT

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerc Binding Sites By A Short Central Region, Forming

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4RB_RHISN (P55635)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444040.1
- ProteinModelPortal:   P55635
- GeneID:   962532
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01850
- HOGENOM:   HBG373304
- ProtClustDB:   CLSK809014
- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- Gene3D:   G3DSA:1.10.443.10

Pfam domain/function: PF00589 Phage_integrase; SSF56349 DNA_brk_join_enz

EC number: NA

Molecular weight: Translated: 36311; Mature: 36180

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFRQAVQEYIEMRRGLGFKLRETERGLIDFAAFLEANDTPHITTELALAWAQRPSRAQ
CCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
PSHWATRLGYVRVFARYRAAADPRTQIPPSGLLPFRPKRARPYLYSKEDIQRLLSAALEM
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
PCRYTRCKLRPWTYYCLFGLLSVSGLRLGEARNLKLADVDFDAAVLTIRGTKFGKSRLVP
CCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCC
MHASTCAVLRDYLKRRRQHCAAQAASPYLFTSQLGNRLDVGDIHRTFYALSRQIGLRGAT
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
DSHGPRLHDMRHVFATNTLVRWYEAEQDPERLLPILSTYLGHVHVADTQWYLTGSPELMK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCEEEECCCHHHHH
EAMRRLERRWEDRT
HHHHHHHHHHCCCC
>Mature Secondary Structure 
STFRQAVQEYIEMRRGLGFKLRETERGLIDFAAFLEANDTPHITTELALAWAQRPSRAQ
CHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
PSHWATRLGYVRVFARYRAAADPRTQIPPSGLLPFRPKRARPYLYSKEDIQRLLSAALEM
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
PCRYTRCKLRPWTYYCLFGLLSVSGLRLGEARNLKLADVDFDAAVLTIRGTKFGKSRLVP
CCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCC
MHASTCAVLRDYLKRRRQHCAAQAASPYLFTSQLGNRLDVGDIHRTFYALSRQIGLRGAT
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
DSHGPRLHDMRHVFATNTLVRWYEAEQDPERLLPILSTYLGHVHVADTQWYLTGSPELMK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCEEEECCCHHHHH
EAMRRLERRWEDRT
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424