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Identifier: 16519897

GI number: 16519897

Start: 272981

End: 273496

Strand: Direct

Name: Not Available

Synonym: NGR_a02080

Alternate gene names: NA

Gene position: 272981-273496 (Clockwise)

Preceding gene: 16519898

Following gene: 16519889

Centisome position: 50.91

GC content: 55.62

Gene sequence:

>516_bases
TTGAACCAACCGCGGTTAGCCAGCGGGCAACGGAATCTTGAGCTGACAAGCCGGGTTGTCTCGGCCTACCTGAGCCGCAA
TATCGTTCCTGCCGCCGATCTGGCCAGTCTTATTCAGCAGACGTATCTCTCGCTATGCAGCACCTCTCAGGCAGACAAGG
CTGAGGAGGCTGCCGTCGAAGAACAGCGGCCCGCCGTCCCGATCAAGAAGTCAGTGACCGCAGACTTCATCATATGCCTG
GAGGACGGTAAAAAATTCAAATCGCTGAAGCGACACCTGATGGCTAAGTACGGCCTCACGCCGCAGCAATATCGAGAGAA
ATGGGGTCTCCCGGCTGATTACCCCATGGTTGCTTCAAGCTATGCTCAAAAGCGTTCCGAGCTTGCGCGCGCTTTGGGTC
TGGGAAAGAAACGGACGGCACCTGAGCTAGGGTCAGGACTCGTTAATCACAGCCAGAAGATGACAGAAGCTGCGATGCAG
ATTGCAGAGAAGAAGGTGTGGGCACATCGGTCATAG

Upstream 100 bases:

>100_bases
CGGCAAAAATCAACCGGCTCCCTGTCGGCCTTCCTTCTGACCGAAATATCTGCAAATTGCGCGGACGGATCTAAGTGACG
GAAGATGCAGGAGAAGAACA

Downstream 100 bases:

>100_bases
CGTGTTGCGATGCGCCTCCAATCCTTGAGCTTGGCGAAAAGGTTCTCGACCTTGTGTCTGCGACGATAGAGGTCTTTGTC
GTAGACGTACGGTTTCTTCC

Product: transcriptional regulator, MucR-family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MNQPRLASGQRNLELTSRVVSAYLSRNIVPAADLASLIQQTYLSLCSTSQADKAEEAAVEEQRPAVPIKKSVTADFIICL
EDGKKFKSLKRHLMAKYGLTPQQYREKWGLPADYPMVASSYAQKRSELARALGLGKKRTAPELGSGLVNHSQKMTEAAMQ
IAEKKVWAHRS

Sequences:

>Translated_171_residues
MNQPRLASGQRNLELTSRVVSAYLSRNIVPAADLASLIQQTYLSLCSTSQADKAEEAAVEEQRPAVPIKKSVTADFIICL
EDGKKFKSLKRHLMAKYGLTPQQYREKWGLPADYPMVASSYAQKRSELARALGLGKKRTAPELGSGLVNHSQKMTEAAMQ
IAEKKVWAHRS
>Mature_171_residues
MNQPRLASGQRNLELTSRVVSAYLSRNIVPAADLASLIQQTYLSLCSTSQADKAEEAAVEEQRPAVPIKKSVTADFIICL
EDGKKFKSLKRHLMAKYGLTPQQYREKWGLPADYPMVASSYAQKRSELARALGLGKKRTAPELGSGLVNHSQKMTEAAMQ
IAEKKVWAHRS

Specific function: Unknown

COG id: COG4957

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ros/mucR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4PD_RHISN (P55613)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444017.1
- ProteinModelPortal:   P55613
- SMR:   P55613
- GeneID:   962213
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02080
- HOGENOM:   HBG457627
- ProtClustDB:   CLSK809013
- GO:   GO:0006350
- InterPro:   IPR008807

Pfam domain/function: PF05443 ROS_MUCR

EC number: NA

Molecular weight: Translated: 18946; Mature: 18946

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPRLASGQRNLELTSRVVSAYLSRNIVPAADLASLIQQTYLSLCSTSQADKAEEAAVE
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
EQRPAVPIKKSVTADFIICLEDGKKFKSLKRHLMAKYGLTPQQYREKWGLPADYPMVASS
HHCCCCCCHHHCCHHEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHH
YAQKRSELARALGLGKKRTAPELGSGLVNHSQKMTEAAMQIAEKKVWAHRS
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQPRLASGQRNLELTSRVVSAYLSRNIVPAADLASLIQQTYLSLCSTSQADKAEEAAVE
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
EQRPAVPIKKSVTADFIICLEDGKKFKSLKRHLMAKYGLTPQQYREKWGLPADYPMVASS
HHCCCCCCHHHCCHHEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHH
YAQKRSELARALGLGKKRTAPELGSGLVNHSQKMTEAAMQIAEKKVWAHRS
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424