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Identifier: 16519889

GI number: 16519889

Start: 283375

End: 283965

Strand: Direct

Name: Not Available

Synonym: NGR_a02160

Alternate gene names: NA

Gene position: 283375-283965 (Clockwise)

Preceding gene: 16519897

Following gene: 16519884

Centisome position: 52.85

GC content: 63.11

Gene sequence:

>591_bases
ATGCACTCTCCCTCAACACTTCCCTCCATTCCGATCGTGACGGATCTCGCCGCCCTTCCCGGCGATCATCTACAATCCGT
GACGCTTTGTTGCCCGTCCTGCGAGGGATTGGGTGGCAGCGCCTATGACAGCCTGGTGCTGCTCCCGATCCATGACGCCA
ACGAACGTCTCTTGTCCGAGCTCCGGAAGGGCGTTTTGAGCGAGAGCCAGGTTTTTGCGGGCGTGTTCGCCCTTGATCCT
TTCCGCCGCCACGTCGACATCCTCAAAGCCCTCGAGACCGCCGGCTGCCACAGAGTGGTCAACTTTCCGAGCGTGACAGC
GATCGACGGAGAAATGCGCGCCAGCCTCGAGGACTTCGGCTACGGCGTGACCGCCGAGATGAATCTCTTGCGGACCGCGA
TCGCCAAGGGCTTCAGCACGCTCGCCGTCGTCGACAGTTTCGGCATGGCGCAGGAAGCCGTCGCGATCGGCGTCAGCGGA
CTGATCGCGGCACGGCATGCCAACGACGCCATGCTCGCCGAGTTCTCGGAGCTTGCGCATGAGACCTCCCTCGGGCTGTT
TCGACTTCCAGACGCGGTCGGCGGGACGTGA

Upstream 100 bases:

>100_bases
TTTCCTCGCCTCAAAGAAACGGTAGTGGCGCGCCACAGCAAATCAATTGGCTGAGGCCGCCGATTTGGGTAGAATTGGGT
AAACGTTTCTCGGGTACACA

Downstream 100 bases:

>100_bases
GCGGGCAATCAGCCCGCGATCCGTGCGCCGGTGTTCGGGTCGAAGAGGTGGGCGCAGCCCTTCCTTGGTGTTAGCCAGAT
TTTTTCGCCCGGCCGCACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MHSPSTLPSIPIVTDLAALPGDHLQSVTLCCPSCEGLGGSAYDSLVLLPIHDANERLLSELRKGVLSESQVFAGVFALDP
FRRHVDILKALETAGCHRVVNFPSVTAIDGEMRASLEDFGYGVTAEMNLLRTAIAKGFSTLAVVDSFGMAQEAVAIGVSG
LIAARHANDAMLAEFSELAHETSLGLFRLPDAVGGT

Sequences:

>Translated_196_residues
MHSPSTLPSIPIVTDLAALPGDHLQSVTLCCPSCEGLGGSAYDSLVLLPIHDANERLLSELRKGVLSESQVFAGVFALDP
FRRHVDILKALETAGCHRVVNFPSVTAIDGEMRASLEDFGYGVTAEMNLLRTAIAKGFSTLAVVDSFGMAQEAVAIGVSG
LIAARHANDAMLAEFSELAHETSLGLFRLPDAVGGT
>Mature_196_residues
MHSPSTLPSIPIVTDLAALPGDHLQSVTLCCPSCEGLGGSAYDSLVLLPIHDANERLLSELRKGVLSESQVFAGVFALDP
FRRHVDILKALETAGCHRVVNFPSVTAIDGEMRASLEDFGYGVTAEMNLLRTAIAKGFSTLAVVDSFGMAQEAVAIGVSG
LIAARHANDAMLAEFSELAHETSLGLFRLPDAVGGT

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4OT_RHISN (P55605)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444009.1
- ProteinModelPortal:   P55605
- SMR:   P55605
- GeneID:   962576
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02160
- HOGENOM:   HBG655907
- ProtClustDB:   CLSK507052
- InterPro:   IPR013785
- InterPro:   IPR009215
- Gene3D:   G3DSA:3.20.20.70

Pfam domain/function: PF09370 TIM-br_sig_trns

EC number: NA

Molecular weight: Translated: 20619; Mature: 20619

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSPSTLPSIPIVTDLAALPGDHLQSVTLCCPSCEGLGGSAYDSLVLLPIHDANERLLSE
CCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHH
LRKGVLSESQVFAGVFALDPFRRHVDILKALETAGCHRVVNFPSVTAIDGEMRASLEDFG
HHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEECCCCEEEECHHHHHHHHHHC
YGVTAEMNLLRTAIAKGFSTLAVVDSFGMAQEAVAIGVSGLIAARHANDAMLAEFSELAH
CCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ETSLGLFRLPDAVGGT
HHCCCCEECCHHCCCC
>Mature Secondary Structure
MHSPSTLPSIPIVTDLAALPGDHLQSVTLCCPSCEGLGGSAYDSLVLLPIHDANERLLSE
CCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHH
LRKGVLSESQVFAGVFALDPFRRHVDILKALETAGCHRVVNFPSVTAIDGEMRASLEDFG
HHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEECCCCEEEECHHHHHHHHHHC
YGVTAEMNLLRTAIAKGFSTLAVVDSFGMAQEAVAIGVSGLIAARHANDAMLAEFSELAH
CCCHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ETSLGLFRLPDAVGGT
HHCCCCEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424