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Identifier: 16519891

GI number: 16519891

Start: 281189

End: 282046

Strand: Reverse

Name: Not Available

Synonym: NGR_a02140

Alternate gene names: NA

Gene position: 282046-281189 (Counterclockwise)

Preceding gene: 16519890

Following gene: 16519892

Centisome position: 52.6

GC content: 62.24

Gene sequence:

>858_bases
GTGAGCACTGATACTCTTGTCAAGCGTCCCACTCGTTCTGAGTTGATCGACCGTTTCCATAGTAAGATCCGCGCCGGCGA
GCCGATCATCGGCGGCGGCGCCGGCACGGGCCTTTCGGCCAAGAGCGAGGAAGCCGGCGATATCGATCTGATCGTGATCT
ACAATTCCGGCCGCTATCGGATGGCCGGCCGCGGCTCGCTCGCCGGGCTTCTCGCCTACGGCAACGCCAACCAGATCGTC
GTCGACATGGCGAGCGAGGTTCTGCCGGTCGTCAAGCACACGCCGGTGCTTGCCGGTGTCAACGGCACGGATCCGTTCGT
CGTCATGCCGACCTTCCTGCGCGAACTGAAGGAGATTGGCTTTGCCGGCGTGCAGAACTTCCCGACGGTTGGTCTTATCG
ACGGGCTTTTCCGTCAGAACCTCGAAGAGACCGGCATGAGCTATGCCCAAGAGGTCGCGATGATCGCTGAGGCGCACAAC
CTCGATCTCCTGACGACGCCTTACGTGTTCGGCCCGGATGATGCCGTGGCGATGGCGAAGGCCGGTGCCGATATTCTCGT
CTGCCATATGGGGCTGACGACCGGTGGAGCGATTGGCGCGCAATCAGGCAAAACGATGGAGGACTGCGTCGCCCTCATCA
ACCAGTGCATCAAGGCGGCGCGGGAAATTCGCGACGACATCATCATCCTTTGCCATGGCGGCCCGATTGCCAATCCTGAG
GACGCGCGCTTCATTCTCGGCGCCTGCCCCGGTTGCCACGGTTTCTATGGCGCCAGCAGCATGGAGCGGCTGCCGACCGA
AGAGGCGATCAAGTCGCAGACGCTCGCCTTCAAAGCGATCCGTCGCAAGCCGGCCTGA

Upstream 100 bases:

>100_bases
CTTCGCCGGACGACCAAGCGGCAACTCATCCGCGTTCCCCTTCACATCAATGATCCGCAATTTGCGGAACTCCTTGTCAC
CAACTTCAAAGAGGCCCTTC

Downstream 100 bases:

>100_bases
CCGTGAGAAGGGAAAGCAAGCAGATGACCATCTTTCGAAGTGGAGACCAGCCGCCGGGTTGGTGCGAACTCACCGACTTC
GAGTTCGTTGACTTGACCGA

Product: dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSTDTLVKRPTRSELIDRFHSKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIV
VDMASEVLPVVKHTPVLAGVNGTDPFVVMPTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVAMIAEAHN
LDLLTTPYVFGPDDAVAMAKAGADILVCHMGLTTGGAIGAQSGKTMEDCVALINQCIKAAREIRDDIIILCHGGPIANPE
DARFILGACPGCHGFYGASSMERLPTEEAIKSQTLAFKAIRRKPA

Sequences:

>Translated_285_residues
MSTDTLVKRPTRSELIDRFHSKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIV
VDMASEVLPVVKHTPVLAGVNGTDPFVVMPTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVAMIAEAHN
LDLLTTPYVFGPDDAVAMAKAGADILVCHMGLTTGGAIGAQSGKTMEDCVALINQCIKAAREIRDDIIILCHGGPIANPE
DARFILGACPGCHGFYGASSMERLPTEEAIKSQTLAFKAIRRKPA
>Mature_284_residues
STDTLVKRPTRSELIDRFHSKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVV
DMASEVLPVVKHTPVLAGVNGTDPFVVMPTFLRELKEIGFAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVAMIAEAHNL
DLLTTPYVFGPDDAVAMAKAGADILVCHMGLTTGGAIGAQSGKTMEDCVALINQCIKAAREIRDDIIILCHGGPIANPED
ARFILGACPGCHGFYGASSMERLPTEEAIKSQTLAFKAIRRKPA

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4OV_RHISN (P55607)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444011.1
- ProteinModelPortal:   P55607
- SMR:   P55607
- GeneID:   962391
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02140
- HOGENOM:   HBG634389
- ProtClustDB:   CLSK2517197
- InterPro:   IPR013785
- InterPro:   IPR009215
- Gene3D:   G3DSA:3.20.20.70
- PIRSF:   PIRSF034452

Pfam domain/function: PF09370 TIM-br_sig_trns

EC number: NA

Molecular weight: Translated: 30204; Mature: 30073

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDTLVKRPTRSELIDRFHSKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYR
CCCCCHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEE
MAGRGSLAGLLAYGNANQIVVDMASEVLPVVKHTPVLAGVNGTDPFVVMPTFLRELKEIG
ECCCCCEEEEEEECCCCEEEEEHHHHHHHHHHCCCEEEECCCCCCEEEHHHHHHHHHHCC
FAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVAMIAEAHNLDLLTTPYVFGPDDAVAMAK
CCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEECCEEECCCHHHHHHH
AGADILVCHMGLTTGGAIGAQSGKTMEDCVALINQCIKAAREIRDDIIILCHGGPIANPE
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
DARFILGACPGCHGFYGASSMERLPTEEAIKSQTLAFKAIRRKPA
CCEEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STDTLVKRPTRSELIDRFHSKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYR
CCCCHHCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEE
MAGRGSLAGLLAYGNANQIVVDMASEVLPVVKHTPVLAGVNGTDPFVVMPTFLRELKEIG
ECCCCCEEEEEEECCCCEEEEEHHHHHHHHHHCCCEEEECCCCCCEEEHHHHHHHHHHCC
FAGVQNFPTVGLIDGLFRQNLEETGMSYAQEVAMIAEAHNLDLLTTPYVFGPDDAVAMAK
CCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEECCEEECCCHHHHHHH
AGADILVCHMGLTTGGAIGAQSGKTMEDCVALINQCIKAAREIRDDIIILCHGGPIANPE
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
DARFILGACPGCHGFYGASSMERLPTEEAIKSQTLAFKAIRRKPA
CCEEEEECCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424