Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16519871

GI number: 16519871

Start: 306150

End: 306503

Strand: Reverse

Name: Not Available

Synonym: NGR_a02340

Alternate gene names: NA

Gene position: 306503-306150 (Counterclockwise)

Preceding gene: 16519870

Following gene: 16519872

Centisome position: 57.17

GC content: 51.41

Gene sequence:

>354_bases
ATGAACGCGGTTCCGATAATCTTGGTTTTTGCTGCGGGCCTGAATTCCTGTATTGGCAATATATTGCTGAAATGGGGCCG
GGCCTCACTGCCTCCCAGCGCCGGACTTGCCGATACGTTTCTCACTCCCGGCTTTGTAGGCGGGGTGGTATTTTATGGCA
TTAACGTTCTACTGTTTGCAAAGGCTCTGGACTCCTTGGAGGTATCAGTCGCTTATCCGATTCTGGCAGGCTCCGGATTC
GCGATGCTTATCATCGCGTCGCATTATTTTTTTGGAGAACCATTCCACCTTCACAAATGGATCGGTGTTGCCCTCGTCCT
GGTGGGCATTATTTTTCTGGCGCGAGGAGGCTAA

Upstream 100 bases:

>100_bases
ATAGGGCTTCTCTCGGAAAAGGCGGAGGGTCACGTCATAAGGCGCCCGTCAAACAGCAGCTCCTGGCATTGCTTCCCTAT
GCACTGCGGCTGATCCCAGG

Downstream 100 bases:

>100_bases
GTTGGCATTCGATCGAGTGATCGTGGCAACATTGACACCTTTATGGCCATTGCTCGACGCGGAAGAAAGGCCAGCGGTGG
TGTCAGAAGTCGCACGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MNAVPIILVFAAGLNSCIGNILLKWGRASLPPSAGLADTFLTPGFVGGVVFYGINVLLFAKALDSLEVSVAYPILAGSGF
AMLIIASHYFFGEPFHLHKWIGVALVLVGIIFLARGG

Sequences:

>Translated_117_residues
MNAVPIILVFAAGLNSCIGNILLKWGRASLPPSAGLADTFLTPGFVGGVVFYGINVLLFAKALDSLEVSVAYPILAGSGF
AMLIIASHYFFGEPFHLHKWIGVALVLVGIIFLARGG
>Mature_117_residues
MNAVPIILVFAAGLNSCIGNILLKWGRASLPPSAGLADTFLTPGFVGGVVFYGINVLLFAKALDSLEVSVAYPILAGSGF
AMLIIASHYFFGEPFHLHKWIGVALVLVGIIFLARGG

Specific function: Unknown

COG id: COG2076

COG function: function code P; Membrane transporters of cations and cationic drugs

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli and S.aureus ethidium bromide resistance proteins (ebr/qacC/emrE/mvrC)

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4NH_RHISN (P55580)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443991.1
- ProteinModelPortal:   P55580
- GeneID:   962375
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02340
- HOGENOM:   HBG655916
- ProtClustDB:   CLSK507034
- InterPro:   IPR000390

Pfam domain/function: PF00893 Multi_Drug_Res

EC number: NA

Molecular weight: Translated: 12275; Mature: 12275

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x403c2400)-; HASH(0xbed2a30)-; HASH(0xb4318c8)-; HASH(0xb7c4750)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVPIILVFAAGLNSCIGNILLKWGRASLPPSAGLADTFLTPGFVGGVVFYGINVLLFA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH
KALDSLEVSVAYPILAGSGFAMLIIASHYFFGEPFHLHKWIGVALVLVGIIFLARGG
HHHHHHHHEEEEHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MNAVPIILVFAAGLNSCIGNILLKWGRASLPPSAGLADTFLTPGFVGGVVFYGINVLLFA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHH
KALDSLEVSVAYPILAGSGFAMLIIASHYFFGEPFHLHKWIGVALVLVGIIFLARGG
HHHHHHHHEEEEHEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424