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The map label for this gene is nodS

Identifier: 16519866

GI number: 16519866

Start: 314303

End: 314953

Strand: Direct

Name: nodS

Synonym: NGR_a02390

Alternate gene names: 16519866

Gene position: 314303-314953 (Clockwise)

Preceding gene: 16519790

Following gene: 16519865

Centisome position: 58.62

GC content: 56.07

Gene sequence:

>651_bases
ATGTGCAAGAGTCTTTGCAGATCCGTGCACGGCGTCTCGGAGGCGAATTTGACGCAGGTCAACAACTATCATTTATTGCA
CCGTGAGCTGGCGGCGGAGGACCCATGGCGGCTCGACGCCAATGCGTTCGAGCAGGAGCGACATTCGCAGATGCTTCGGT
TGTCGCTTTCCCAAGGTCCTATCACCAACGCACTCGAAGTCGGGTGCGCGGCCGGCGCATTCACGGAAAAACTGGCGCCT
TATTGCAAGCGGCTGACTGTGATTGATGTGGTGCCGCGAGCGATTGCTCGAACGAGGCAACGGATGAAGGAATCGTCTCA
CATCAACTGGATAGTCGCTGACGTTCGACAGTTCTCGACTCAGCAGCTATTCGATCTGATCGTCGTGGCCGAAGTTCTTT
ATTATCTCGAGGATGTAGCCGCGATACGCACCGCCGTTCACAACCTGGTGAGCATGCTGGCGCCAAGTGGGCACATGGTT
TTTGGATCCGCAATCGATGCTAATTGCCGGCGCTGGGGGCATGTGGCCGGTGCCGAGACCGTCATCGCGATGTTGAACGA
AACGTTGATCGAGGTGGAGCGGCTTTATTGCCGCGGCGCATCGGTCAATGAAGACTGCTTGCTTTCCCGTTTTCAGAAAT
CGACTACCTGA

Upstream 100 bases:

>100_bases
CAAGTAGCAGTATTGACGGAGCCATCGTTGCCGGCGACCGCTTTTTCGGGAATTCGCGTGCATTCCACGCCTCCGGATTC
GCGCCTCGCTCTGCCCACCC

Downstream 100 bases:

>100_bases
TTTGGATAGAGACACTATGCGCGTCTGTGGCATCAAGTTAACCCATGACGGGGCTATCGCCGTTGTCGAAGATGGAAGGC
TCGTCTTCTGTACTGAGCAG

Product: nodulation protein NodS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MCKSLCRSVHGVSEANLTQVNNYHLLHRELAAEDPWRLDANAFEQERHSQMLRLSLSQGPITNALEVGCAAGAFTEKLAP
YCKRLTVIDVVPRAIARTRQRMKESSHINWIVADVRQFSTQQLFDLIVVAEVLYYLEDVAAIRTAVHNLVSMLAPSGHMV
FGSAIDANCRRWGHVAGAETVIAMLNETLIEVERLYCRGASVNEDCLLSRFQKSTT

Sequences:

>Translated_216_residues
MCKSLCRSVHGVSEANLTQVNNYHLLHRELAAEDPWRLDANAFEQERHSQMLRLSLSQGPITNALEVGCAAGAFTEKLAP
YCKRLTVIDVVPRAIARTRQRMKESSHINWIVADVRQFSTQQLFDLIVVAEVLYYLEDVAAIRTAVHNLVSMLAPSGHMV
FGSAIDANCRRWGHVAGAETVIAMLNETLIEVERLYCRGASVNEDCLLSRFQKSTT
>Mature_216_residues
MCKSLCRSVHGVSEANLTQVNNYHLLHRELAAEDPWRLDANAFEQERHSQMLRLSLSQGPITNALEVGCAAGAFTEKLAP
YCKRLTVIDVVPRAIARTRQRMKESSHINWIVADVRQFSTQQLFDLIVVAEVLYYLEDVAAIRTAVHNLVSMLAPSGHMV
FGSAIDANCRRWGHVAGAETVIAMLNETLIEVERLYCRGASVNEDCLLSRFQKSTT

Specific function: SAM-utilizing methyltransferase involved in nod factor synthesis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nodS family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NODS_RHISN (P19441)

Other databases:

- EMBL:   J03686
- EMBL:   U00090
- RefSeq:   NP_443986.1
- ProteinModelPortal:   P19441
- SMR:   P19441
- GeneID:   962376
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02390
- HOGENOM:   HBG334848
- ProtClustDB:   CLSK864444
- GO:   GO:0009877
- InterPro:   IPR020944
- InterPro:   IPR008715
- PIRSF:   PIRSF009310

Pfam domain/function: PF05401 NodS

EC number: NA

Molecular weight: Translated: 24170; Mature: 24170

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKSLCRSVHGVSEANLTQVNNYHLLHRELAAEDPWRLDANAFEQERHSQMLRLSLSQGP
CCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
ITNALEVGCAAGAFTEKLAPYCKRLTVIDVVPRAIARTRQRMKESSHINWIVADVRQFST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
QQLFDLIVVAEVLYYLEDVAAIRTAVHNLVSMLAPSGHMVFGSAIDANCRRWGHVAGAET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCHHHHHH
VIAMLNETLIEVERLYCRGASVNEDCLLSRFQKSTT
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MCKSLCRSVHGVSEANLTQVNNYHLLHRELAAEDPWRLDANAFEQERHSQMLRLSLSQGP
CCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
ITNALEVGCAAGAFTEKLAPYCKRLTVIDVVPRAIARTRQRMKESSHINWIVADVRQFST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
QQLFDLIVVAEVLYYLEDVAAIRTAVHNLVSMLAPSGHMVFGSAIDANCRRWGHVAGAET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCHHHHHH
VIAMLNETLIEVERLYCRGASVNEDCLLSRFQKSTT
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2134856; 9163424