Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16519855

GI number: 16519855

Start: 329425

End: 330399

Strand: Direct

Name: Not Available

Synonym: NGR_a02500

Alternate gene names: 16519855

Gene position: 329425-330399 (Clockwise)

Preceding gene: 16519856

Following gene: 16519854

Centisome position: 61.44

GC content: 61.85

Gene sequence:

>975_bases
ATGAGGAAGAAACTGAACGGGTGGCTCGCCATGGCAGCGGGTGCAGCGCTGGCAGCGTTGTCGAGCGTCTCGCATGCGGA
GGACAGGAAAACGGTCGCCTATCTCGCGCCATCGCTCGACATTTCCTATTGGCAGTGGGTCGGCTTCGGCGTGAAGCAGA
AGGCCCAAGAGCTAGGTATGGACTATGTCGAGTTCACCTCCGAGAATTCGCCGGCCAAGCAGATGGATAATGCGCGGACC
GCGGTGACAAAGGGCGTCGACGCGATCGTCATCGGTCCGGTGAGCTCGACCAGCACCCCGCCTCTGCTCGCCTATCTGAA
ATCCCAGAACATACCGATCGCTTTCGCGGGTATCGGCCCGCAGCCCGGCCAGACGGACTACACGTCCTCGGTCACCGCCA
ACAACTACGAAACTGGCAAAGCCCAAGGCAGCTTCGTCTGCGCCCTCGCCAAGGAGCGCGGCGGCAACAAGGTTGGTATG
CTTTCCCTTCCGCAGGACCGCGAGAACGCCCAGAAGTATCTCAAGGGCGCTCAGGAGGCCTTCGCAGCCGACGGCTGCGA
ACTTGTCCAGATGCTGGAGACGCGTGGGCTGACCGTCAATGAGGCGGTGACGCAGGCCAATGACATGCTGACGGCCCATC
CGGACATCAAGGCGATCTACGGTATGTATGATGAGGCCGGGACCGGAGCGGCGAAGGTGCTTGAAACCCGCGGCCTGACC
GGAAAGATCGGCATCGCGGTCGCAGACGGCAGCCCGACGACCATTGCACTGTTGAAAGCCACCGCCATCCAGGGGATCTT
CTTCCAGGAGGCGGTGGGACAGGGCATCGACGGCACGCTGCAGGTATTCAACGCTCTGACCAATGCTCCGGTCGAAAAGG
ATCTTGCGCTTGTCATGCCGCTCGTGACCGCCGACAAGATCGATACGGCGGAAGCGAAGGCGGTCATCGCCCGCGTTTTC
CCCCCGAGCAACTGA

Upstream 100 bases:

>100_bases
ATCCTGATCGCGGTCCTGATCGATCGCTTCAGCAAATCGCGGCGCGGTGCCGTGTAATCCGTCCCGGGGGAGACCTGGAC
GTCAAGAGGAGGAAGAAGGC

Downstream 100 bases:

>100_bases
CAGGAGACTCGCGGGAACGGCGGTGCCTGCCGTTTCCCGCGACCCCGAGGAGATACCATGTCCGACATCGCCATCATCGA
CCCCCATTTCCACCTCTGGG

Product: ABC transporter substrate-binding protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MRKKLNGWLAMAAGAALAALSSVSHAEDRKTVAYLAPSLDISYWQWVGFGVKQKAQELGMDYVEFTSENSPAKQMDNART
AVTKGVDAIVIGPVSSTSTPPLLAYLKSQNIPIAFAGIGPQPGQTDYTSSVTANNYETGKAQGSFVCALAKERGGNKVGM
LSLPQDRENAQKYLKGAQEAFAADGCELVQMLETRGLTVNEAVTQANDMLTAHPDIKAIYGMYDEAGTGAAKVLETRGLT
GKIGIAVADGSPTTIALLKATAIQGIFFQEAVGQGIDGTLQVFNALTNAPVEKDLALVMPLVTADKIDTAEAKAVIARVF
PPSN

Sequences:

>Translated_324_residues
MRKKLNGWLAMAAGAALAALSSVSHAEDRKTVAYLAPSLDISYWQWVGFGVKQKAQELGMDYVEFTSENSPAKQMDNART
AVTKGVDAIVIGPVSSTSTPPLLAYLKSQNIPIAFAGIGPQPGQTDYTSSVTANNYETGKAQGSFVCALAKERGGNKVGM
LSLPQDRENAQKYLKGAQEAFAADGCELVQMLETRGLTVNEAVTQANDMLTAHPDIKAIYGMYDEAGTGAAKVLETRGLT
GKIGIAVADGSPTTIALLKATAIQGIFFQEAVGQGIDGTLQVFNALTNAPVEKDLALVMPLVTADKIDTAEAKAVIARVF
PPSN
>Mature_324_residues
MRKKLNGWLAMAAGAALAALSSVSHAEDRKTVAYLAPSLDISYWQWVGFGVKQKAQELGMDYVEFTSENSPAKQMDNART
AVTKGVDAIVIGPVSSTSTPPLLAYLKSQNIPIAFAGIGPQPGQTDYTSSVTANNYETGKAQGSFVCALAKERGGNKVGM
LSLPQDRENAQKYLKGAQEAFAADGCELVQMLETRGLTVNEAVTQANDMLTAHPDIKAIYGMYDEAGTGAAKVLETRGLT
GKIGIAVADGSPTTIALLKATAIQGIFFQEAVGQGIDGTLQVFNALTNAPVEKDLALVMPLVTADKIDTAEAKAVIARVF
PPSN

Specific function: Probably part of the binding-protein-dependent transport system y4mIJK. This system probably transports a sugar

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family

Homologues:

Organism=Escherichia coli, GI1790192, Length=247, Percent_Identity=25.9109311740891, Blast_Score=79, Evalue=5e-16,

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): Y4MI_RHISN (P55568)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443975.1
- ProteinModelPortal:   P55568
- GeneID:   962570
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02500
- HOGENOM:   HBG360465
- ProtClustDB:   CLSK784541
- InterPro:   IPR001761

Pfam domain/function: PF00532 Peripla_BP_1

EC number: NA

Molecular weight: Translated: 34088; Mature: 34088

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKLNGWLAMAAGAALAALSSVSHAEDRKTVAYLAPSLDISYWQWVGFGVKQKAQELGM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHCCCHHHHHHHHCC
DYVEFTSENSPAKQMDNARTAVTKGVDAIVIGPVSSTSTPPLLAYLKSQNIPIAFAGIGP
HHEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHEECCCCCCEEEECCCC
QPGQTDYTSSVTANNYETGKAQGSFVCALAKERGGNKVGMLSLPQDRENAQKYLKGAQEA
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCCEEEEEECCCCHHHHHHHHHHHHHH
FAADGCELVQMLETRGLTVNEAVTQANDMLTAHPDIKAIYGMYDEAGTGAAKVLETRGLT
HHCCHHHHHHHHHHCCCCHHHHHHHHCCCEECCCCHHHHHHCCCCCCCCHHHHHHHCCCC
GKIGIAVADGSPTTIALLKATAIQGIFFQEAVGQGIDGTLQVFNALTNAPVEKDLALVMP
EEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHH
LVTADKIDTAEAKAVIARVFPPSN
HHHCCCCCHHHHHEEEEEECCCCC
>Mature Secondary Structure
MRKKLNGWLAMAAGAALAALSSVSHAEDRKTVAYLAPSLDISYWQWVGFGVKQKAQELGM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHCCCHHHHHHHHCC
DYVEFTSENSPAKQMDNARTAVTKGVDAIVIGPVSSTSTPPLLAYLKSQNIPIAFAGIGP
HHEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHEECCCCCCEEEECCCC
QPGQTDYTSSVTANNYETGKAQGSFVCALAKERGGNKVGMLSLPQDRENAQKYLKGAQEA
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCCEEEEEECCCCHHHHHHHHHHHHHH
FAADGCELVQMLETRGLTVNEAVTQANDMLTAHPDIKAIYGMYDEAGTGAAKVLETRGLT
HHCCHHHHHHHHHHCCCCHHHHHHHHCCCEECCCCHHHHHHCCCCCCCCHHHHHHHCCCC
GKIGIAVADGSPTTIALLKATAIQGIFFQEAVGQGIDGTLQVFNALTNAPVEKDLALVMP
EEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHH
LVTADKIDTAEAKAVIARVFPPSN
HHHCCCCCHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424