Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
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Accession | NC_000914 |
Length | 536,165 |
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The map label for this gene is cpxR
Identifier: 16519834
GI number: 16519834
Start: 359524
End: 360927
Strand: Direct
Name: cpxR
Synonym: NGR_a02710
Alternate gene names: NA
Gene position: 359524-360927 (Clockwise)
Preceding gene: 16519835
Following gene: 16519833
Centisome position: 67.05
GC content: 67.17
Gene sequence:
>1404_bases ATGGACATGCAAGAAACCACGACAGCATGCGCGGACGCCTTTGCCGAACTGGCGTCGCCAGCCTGCATCGACGACCCGTA TCCGTTCATGCGCTGGTTGCGCGAGCACGATCCGGTGCATCGCGCGGCGTCGGGCCTCTTTCTGTTGAGCCGCCACGCCG ACATCTGCTGGGCGCTCAAGGCCACGGGCGACGCGTTTCGGGGACCGGCGCCGGGCGAACTGGCGCGCTATTTCCCGCGT GCGGCGACCAGCCTGTCGCTCAATCTGCTGGCGTCCACGCTAGCGATGAAGGAACCACCGACGCATACGCGTCTGCGCCG GCTGATCTCGCGCGATTTCACCATGCGCGAGATCGACAACCTGCGGCCGAGCATCGCGCGCTTCGTCGCAGCGCGCCTGG ACGGCATGGCGCCCGCGCTGGAGCGCGGGGAGGCGGTGGACCTGCATCGGCAATTCGCGCTGGCCTTGCCCATGCTGGTC TTCGCCGAACTGTTCGGCATGCCACAGGACGACATGTTCGGCCTCGCCGCCGGCATCGGCGCCATTCTGGAAGGCCTGAG CCCGCACGCCAGCGATCCCCAGCTCGCCGCGGCAGACGCGGCCAGCGCCAGGATGAAGGCCTACTTCGGCGACCTGATAC AGCGCAAGTGCATCGATCCCCGCCACGACATTGTGGCCACGCTGGTCGGCGCACACGACGACGATGCCGACACGCTATCG GATGCGGAGTTGATCAGCATGCTGTGGGGCATGCTGCTGGGCGGCTTCGCCACCACTGCTGCGACCATCGACCATGCCGT CCTGGCGATGCTGGCGTATCCCGACCAGCGGCACTGGCTGCAGGGAGACGCCGCGGGGGTGGAGGCATTCGTCGAAGAGG TCCTGCGCTGCGACGCCCCCGCCATGTTCAGCTCCATTCCGCGTATTGCCCAGAGCGACATCGAACTGAGCGGCGTGGTG ATCCCGAAGAACGCGGACGTGCGCGTGCTGATCGCGGCCGGCAATCGCGACCCGGACGCCTTCGCCGATCCCGACCGCTT CGATCCCGCTCGGTTCTACGGCACCAGTCCTGGCATGTCGACCGACGGGAAGATCATGCTTAGCTTCGGCCACGGCATCC ACTTCTGCCTCGGTGCGCAACTGGCCCGGGTGCAGTTGGCCGAGAGCCTGCCGCGAATCCAGGCGCGCTTCCCCACGCTG ACAGTGGCCGAGCAGCCGACCCGGGAGCCCTCCGCGTTCCTTAGGACGTTCCGCGCGCTGCCGGTGCGGCTGCATGCTCA GGGGGACTCCCCCCGTTTAACAAGCGCATTTTTGAACGGCCAGAGAGGGGTCGAAGGTGGTGCCAGTTTTGAGCATGGCG ACGGCGAGAGGCGGTCGGCGACTGATCGCAGGGCGCAACCGTAG
Upstream 100 bases:
>100_bases TCTGGTGATGCGCGGACGCCGCCGGGAATCGCGATCTTCTCCGCAATTTGCAGGCGCGCCTGGCGCGCCTGTCAGATCAG CCAGCCGACAGGTAACCAAG
Downstream 100 bases:
>100_bases AACCGCATGAAAAGGGTACAAGGGCTGAGATGCGCGTCGTGATTGACCAAGATCTGTGCGGAACCACTGGGCAGTGCGTG CTGACGCTGCCGGGCACCTT
Product: cytochrome P450 protein CpxR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MDMQETTTACADAFAELASPACIDDPYPFMRWLREHDPVHRAASGLFLLSRHADICWALKATGDAFRGPAPGELARYFPR AATSLSLNLLASTLAMKEPPTHTRLRRLISRDFTMREIDNLRPSIARFVAARLDGMAPALERGEAVDLHRQFALALPMLV FAELFGMPQDDMFGLAAGIGAILEGLSPHASDPQLAAADAASARMKAYFGDLIQRKCIDPRHDIVATLVGAHDDDADTLS DAELISMLWGMLLGGFATTAATIDHAVLAMLAYPDQRHWLQGDAAGVEAFVEEVLRCDAPAMFSSIPRIAQSDIELSGVV IPKNADVRVLIAAGNRDPDAFADPDRFDPARFYGTSPGMSTDGKIMLSFGHGIHFCLGAQLARVQLAESLPRIQARFPTL TVAEQPTREPSAFLRTFRALPVRLHAQGDSPRLTSAFLNGQRGVEGGASFEHGDGERRSATDRRAQP
Sequences:
>Translated_467_residues MDMQETTTACADAFAELASPACIDDPYPFMRWLREHDPVHRAASGLFLLSRHADICWALKATGDAFRGPAPGELARYFPR AATSLSLNLLASTLAMKEPPTHTRLRRLISRDFTMREIDNLRPSIARFVAARLDGMAPALERGEAVDLHRQFALALPMLV FAELFGMPQDDMFGLAAGIGAILEGLSPHASDPQLAAADAASARMKAYFGDLIQRKCIDPRHDIVATLVGAHDDDADTLS DAELISMLWGMLLGGFATTAATIDHAVLAMLAYPDQRHWLQGDAAGVEAFVEEVLRCDAPAMFSSIPRIAQSDIELSGVV IPKNADVRVLIAAGNRDPDAFADPDRFDPARFYGTSPGMSTDGKIMLSFGHGIHFCLGAQLARVQLAESLPRIQARFPTL TVAEQPTREPSAFLRTFRALPVRLHAQGDSPRLTSAFLNGQRGVEGGASFEHGDGERRSATDRRAQP >Mature_467_residues MDMQETTTACADAFAELASPACIDDPYPFMRWLREHDPVHRAASGLFLLSRHADICWALKATGDAFRGPAPGELARYFPR AATSLSLNLLASTLAMKEPPTHTRLRRLISRDFTMREIDNLRPSIARFVAARLDGMAPALERGEAVDLHRQFALALPMLV FAELFGMPQDDMFGLAAGIGAILEGLSPHASDPQLAAADAASARMKAYFGDLIQRKCIDPRHDIVATLVGAHDDDADTLS DAELISMLWGMLLGGFATTAATIDHAVLAMLAYPDQRHWLQGDAAGVEAFVEEVLRCDAPAMFSSIPRIAQSDIELSGVV IPKNADVRVLIAAGNRDPDAFADPDRFDPARFYGTSPGMSTDGKIMLSFGHGIHFCLGAQLARVQLAESLPRIQARFPTL TVAEQPTREPSAFLRTFRALPVRLHAQGDSPRLTSAFLNGQRGVEGGASFEHGDGERRSATDRRAQP
Specific function: Cytochromes P450 are a group of heme-thiolate monooxygenases. They oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CPXR_RHISN (P55543)
Other databases:
- EMBL: U00090 - PIR: T10879 - RefSeq: NP_443954.1 - ProteinModelPortal: P55543 - GeneID: 962600 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a02710 - HOGENOM: HBG695262 - ProtClustDB: CLSK506589 - InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 - Gene3D: G3DSA:1.10.630.10 - PRINTS: PR00359 - PRINTS: PR00385
Pfam domain/function: PF00067 p450; SSF48264 Cytochrome_P450
EC number: NA
Molecular weight: Translated: 50695; Mature: 50695
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMQETTTACADAFAELASPACIDDPYPFMRWLREHDPVHRAASGLFLLSRHADICWALK CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHEECCCCEEEEEE ATGDAFRGPAPGELARYFPRAATSLSLNLLASTLAMKEPPTHTRLRRLISRDFTMREIDN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH LRPSIARFVAARLDGMAPALERGEAVDLHRQFALALPMLVFAELFGMPQDDMFGLAAGIG CCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AILEGLSPHASDPQLAAADAASARMKAYFGDLIQRKCIDPRHDIVATLVGAHDDDADTLS HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH DAELISMLWGMLLGGFATTAATIDHAVLAMLAYPDQRHWLQGDAAGVEAFVEEVLRCDAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCC AMFSSIPRIAQSDIELSGVVIPKNADVRVLIAAGNRDPDAFADPDRFDPARFYGTSPGMS HHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCC TDGKIMLSFGHGIHFCLGAQLARVQLAESLPRIQARFPTLTVAEQPTREPSAFLRTFRAL CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHC PVRLHAQGDSPRLTSAFLNGQRGVEGGASFEHGDGERRSATDRRAQP CEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCC >Mature Secondary Structure MDMQETTTACADAFAELASPACIDDPYPFMRWLREHDPVHRAASGLFLLSRHADICWALK CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHEECCCCEEEEEE ATGDAFRGPAPGELARYFPRAATSLSLNLLASTLAMKEPPTHTRLRRLISRDFTMREIDN CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH LRPSIARFVAARLDGMAPALERGEAVDLHRQFALALPMLVFAELFGMPQDDMFGLAAGIG CCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH AILEGLSPHASDPQLAAADAASARMKAYFGDLIQRKCIDPRHDIVATLVGAHDDDADTLS HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHH DAELISMLWGMLLGGFATTAATIDHAVLAMLAYPDQRHWLQGDAAGVEAFVEEVLRCDAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCC AMFSSIPRIAQSDIELSGVVIPKNADVRVLIAAGNRDPDAFADPDRFDPARFYGTSPGMS HHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCC TDGKIMLSFGHGIHFCLGAQLARVQLAESLPRIQARFPTLTVAEQPTREPSAFLRTFRAL CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHC PVRLHAQGDSPRLTSAFLNGQRGVEGGASFEHGDGERRSATDRRAQP CEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424