Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
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Accession | NC_000914 |
Length | 536,165 |
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Identifier: 16519833
GI number: 16519833
Start: 360957
End: 361265
Strand: Direct
Name: Not Available
Synonym: NGR_a02720
Alternate gene names: NA
Gene position: 360957-361265 (Clockwise)
Preceding gene: 16519834
Following gene: 16519832
Centisome position: 67.32
GC content: 68.93
Gene sequence:
>309_bases ATGCGCGTCGTGATTGACCAAGATCTGTGCGGAACCACTGGGCAGTGCGTGCTGACGCTGCCGGGCACCTTTCGCCAGCG CGAACCGGACGGCGTGGCCGAAGTGTGCGTGGCGACGGTACCGCAGGCGCTGCACGCCGCCGTGCGGCTCGCGGCCAGCC AGTGCCCGGTCGCCGCCATTCGGGTCATCGAAAGCGACGCTGGCGATGACGAGCGCGCCAGCGCCGACCCTGCGCGTTCT CCGGCGGAGGCCGAGCGGCATGCGGCGAAAGACCAACGCATTCCAGGAGGACACGATGGAACGGTTTGA
Upstream 100 bases:
>100_bases AAGGTGGTGCCAGTTTTGAGCATGGCGACGGCGAGAGGCGGTCGGCGACTGATCGCAGGGCGCAACCGTAGAACCGCATG AAAAGGGTACAAGGGCTGAG
Downstream 100 bases:
>100_bases AGGCAAGGTGGCCGTGGTGACCGGCGCCGGCGCCGGCATCGGCAAGGCATGTGCCCTCGCCATCGCGCGCGAGGGCGGCA GAGTGGTGGTGGCCGACCTT
Product: P450-system 3Fe-4S ferredoxin protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MRVVIDQDLCGTTGQCVLTLPGTFRQREPDGVAEVCVATVPQALHAAVRLAASQCPVAAIRVIESDAGDDERASADPARS PAEAERHAAKDQRIPGGHDGTV
Sequences:
>Translated_102_residues MRVVIDQDLCGTTGQCVLTLPGTFRQREPDGVAEVCVATVPQALHAAVRLAASQCPVAAIRVIESDAGDDERASADPARS PAEAERHAAKDQRIPGGHDGTV >Mature_102_residues MRVVIDQDLCGTTGQCVLTLPGTFRQREPDGVAEVCVATVPQALHAAVRLAASQCPVAAIRVIESDAGDDERASADPARS PAEAERHAAKDQRIPGGHDGTV
Specific function: Electron transport protein for the cytochrome systems (Potential)
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 3Fe-4S ferredoxin-type domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FE45_RHISN (P55542)
Other databases:
- EMBL: U00090 - PIR: T10878 - RefSeq: NP_443953.1 - ProteinModelPortal: P55542 - SMR: P55542 - GeneID: 962355 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a02720 - HOGENOM: HBG734156 - GO: GO:0006810 - InterPro: IPR001080 - InterPro: IPR010693 - PRINTS: PR00352
Pfam domain/function: PF06902 DUF1271
EC number: NA
Molecular weight: Translated: 10642; Mature: 10642
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVIDQDLCGTTGQCVLTLPGTFRQREPDGVAEVCVATVPQALHAAVRLAASQCPVAAI CEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RVIESDAGDDERASADPARSPAEAERHAAKDQRIPGGHDGTV HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRVVIDQDLCGTTGQCVLTLPGTFRQREPDGVAEVCVATVPQALHAAVRLAASQCPVAAI CEEEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RVIESDAGDDERASADPARSPAEAERHAAKDQRIPGGHDGTV HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424