| Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
|---|---|
| Accession | NC_000914 |
| Length | 536,165 |
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Identifier: 16519816
GI number: 16519816
Start: 376033
End: 376242
Strand: Direct
Name: Not Available
Synonym: NGR_a02890
Alternate gene names: NA
Gene position: 376033-376242 (Clockwise)
Preceding gene: 16519817
Following gene: 16519815
Centisome position: 70.13
GC content: 51.9
Gene sequence:
>210_bases ATGTTTTTGCTTCAATTCGCTCAGCGAGTGAAGGATCTCTCGATGGTGTACGAATGGGACGAGTGCAATGCAAGGCGCGG TTACATATTGAAGATGCTCGGCGCAATCGATGTGGCTGTCGCAGTCGCAAGCGTTCCAACATTGTTTGTCGTCACCGCGA TTTCCCATGACCTCATGAGCGCCTTGGCGACTCCGCAAGTTGACAGGTAA
Upstream 100 bases:
>100_bases CTGGATTTCCGCGATGAAGTCGCACAAATCCTAGACGATTTCTCACTCGAGATCGTTTGATCCCCCGGCGAGTGTCATTT GTGCACTCGACTTTTGGCAC
Downstream 100 bases:
>100_bases GCTGCCCCCTTACGCAAAAAACCACAAAATTTTCCCTTTGAGGGCGAACGCGGCCTCGGCTACAACTGATTCAAGGCATC AGAATTGGTTGGGGAGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MFLLQFAQRVKDLSMVYEWDECNARRGYILKMLGAIDVAVAVASVPTLFVVTAISHDLMSALATPQVDR
Sequences:
>Translated_69_residues MFLLQFAQRVKDLSMVYEWDECNARRGYILKMLGAIDVAVAVASVPTLFVVTAISHDLMSALATPQVDR >Mature_69_residues MFLLQFAQRVKDLSMVYEWDECNARRGYILKMLGAIDVAVAVASVPTLFVVTAISHDLMSALATPQVDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4KG_RHISN (P55527)
Other databases:
- EMBL: U00090 - RefSeq: NP_443936.1 - GeneID: 962346 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a02890
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7687; Mature: 7687
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xaf1c960)-;
Cys/Met content:
1.4 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLLQFAQRVKDLSMVYEWDECNARRGYILKMLGAIDVAVAVASVPTLFVVTAISHDLMS CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALATPQVDR HHCCCCCCH >Mature Secondary Structure MFLLQFAQRVKDLSMVYEWDECNARRGYILKMLGAIDVAVAVASVPTLFVVTAISHDLMS CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALATPQVDR HHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424